SCNM1 3007

Name: SCNM1	Sequence: fasta or formatted (230aa)		NCBI GI: 13128998
Description: sodium channel modifier 1		Referenced in: Sodium Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 19 2 C cysteine 1.7 4 2 D aspartate 5.7 13 2 E glutamate 8.3 19 3 F phenylalanine 1.7 4 1 G glycine 5.2 12 1 H histidine 3.0 7 1 I isoleucine 2.2 5 1 K lysine 6.5 15 2 L leucine 10.4 24 2 M methionine 2.2 5 1 N asparagine 2.2 5 1 P proline 10.0 23 2 Q glutamine 3.9 9 1 R arginine 9.6 22 3 S serine 8.3 19 2 T threonine 3.9 9 1 V valine 3.5 8 1 W tryptophan 1.3 3 1 Y tyrosine 2.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel modifier 1 MAP7D1 0.031 MAP7 domain containing 1 CSF3R 0.022 colony stimulating factor 3 receptor isoform b precu... TNRC6B 0.022 trinucleotide repeat containing 6B isoform 2 TNRC6B 0.022 trinucleotide repeat containing 6B isoform 1 LIG1 0.022 DNA ligase I ARHGAP30 0.022 Rho GTPase activating protein 30 isoform 2 ARHGAP30 0.022 Rho GTPase activating protein 30 isoform 1 LOC388079 0.020 PREDICTED: similar to hCG2042704 ZNF828 0.018 zinc finger protein 828 SGPP1 0.018 sphingosine-1-phosphate phosphatase 1 LOC100291634 0.018 PREDICTED: hypothetical protein XP_002346062 LOC100291096 0.018 PREDICTED: hypothetical protein XP_002346952 UBTFL6 0.018 PREDICTED: upstream binding transcription factor, R... LOC100287232 0.018 PREDICTED: hypothetical protein XP_002342816 UBTFL3 0.018 PREDICTED: upstream binding transcription factor, R... UBTFL5 0.018 PREDICTED: upstream binding transcription factor, R... LOC100287232 0.018 PREDICTED: hypothetical protein BSDC1 0.018 BSD domain containing 1 isoform d BSDC1 0.018 BSD domain containing 1 isoform c BSDC1 0.018 BSD domain containing 1 isoform a BSDC1 0.018 BSD domain containing 1 isoform b RNF43 0.018 ring finger protein 43 ASXL2 0.018 additional sex combs like 2 LOC646396 0.016 PREDICTED: similar to hCG2042704 UBTFL6 0.016 PREDICTED: upstream binding transcription factor, R... LOC646396 0.016 PREDICTED: similar to hCG2042704 UBTFL6 0.016 PREDICTED: upstream binding transcription factor, R... FAT4 0.016 FAT tumor suppressor homolog 4 SON 0.016 SON DNA-binding protein isoform F Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.