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Search of human proteins with 149773468
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149773468 RAD51 associated protein 2 [Homo sapiens]
(1159 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149773468 RAD51 associated protein 2 [Homo sapiens] 2360 0.0
gi|217416398 hyaluronan-mediated motility receptor isoform c [Ho... 40 0.010
gi|217272804 hyaluronan-mediated motility receptor isoform d [Ho... 40 0.017
gi|217272802 hyaluronan-mediated motility receptor isoform a [Ho... 40 0.017
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho... 40 0.017
gi|195963418 tubulin tyrosine ligase-like family, member 6 isofo... 37 0.11
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 36 0.19
gi|153945715 myosin VC [Homo sapiens] 36 0.19
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 35 0.32
gi|55770834 centromere protein F [Homo sapiens] 35 0.32
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 35 0.41
gi|237681119 breast cancer 1, early onset isoform 2 [Homo sapiens] 35 0.54
gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens] 35 0.54
gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens] 35 0.54
gi|119395734 breast cancer 2, early onset [Homo sapiens] 34 0.71
gi|21735569 claspin [Homo sapiens] 34 0.71
gi|34740327 zinc finger protein 804A [Homo sapiens] 33 1.2
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 33 1.2
gi|148596998 coiled-coil domain containing 122 [Homo sapiens] 33 1.2
gi|50593524 hypothetical protein LOC119392 isoform b [Homo sapiens] 33 1.2
gi|50593526 hypothetical protein LOC119392 isoform a [Homo sapiens] 33 1.2
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 33 1.6
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 33 1.6
gi|47078278 choline kinase alpha isoform b [Homo sapiens] 32 2.7
gi|47078276 choline kinase alpha isoform a [Homo sapiens] 32 2.7
gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-l... 32 2.7
gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein... 32 2.7
gi|5453904 RAD51 associated protein 1 isoform b [Homo sapiens] 32 2.7
gi|195947391 RAD51 associated protein 1 isoform a [Homo sapiens] 32 2.7
gi|47578107 delangin isoform B [Homo sapiens] 32 2.7
>gi|149773468 RAD51 associated protein 2 [Homo sapiens]
Length = 1159
Score = 2360 bits (6117), Expect = 0.0
Identities = 1159/1159 (100%), Positives = 1159/1159 (100%)
Query: 1 MSLPQPTPRMAELRKPTSSLTPPEDPDSQPPSSKRLCLEEPGGVFKAGWRLPLVPRLSEA 60
MSLPQPTPRMAELRKPTSSLTPPEDPDSQPPSSKRLCLEEPGGVFKAGWRLPLVPRLSEA
Sbjct: 1 MSLPQPTPRMAELRKPTSSLTPPEDPDSQPPSSKRLCLEEPGGVFKAGWRLPLVPRLSEA 60
Query: 61 EKVWELSPRPFKGLLVSTNAIFDNSTDSCVEKSVSGKQICNLKCSNLKFQMSSCLQSPPS 120
EKVWELSPRPFKGLLVSTNAIFDNSTDSCVEKSVSGKQICNLKCSNLKFQMSSCLQSPPS
Sbjct: 61 EKVWELSPRPFKGLLVSTNAIFDNSTDSCVEKSVSGKQICNLKCSNLKFQMSSCLQSPPS 120
Query: 121 QSPDSDLRASGRSEAGLHDREAFSVHRSNSSKAGVSQLLPSTSIHDIHGIRNENRKQQFV 180
QSPDSDLRASGRSEAGLHDREAFSVHRSNSSKAGVSQLLPSTSIHDIHGIRNENRKQQFV
Sbjct: 121 QSPDSDLRASGRSEAGLHDREAFSVHRSNSSKAGVSQLLPSTSIHDIHGIRNENRKQQFV 180
Query: 181 QGRDNVHKENPFLDVTFYKETKSPFHEIKNRCKANSVVPSNKRENNISSSVLKISKSQNQ 240
QGRDNVHKENPFLDVTFYKETKSPFHEIKNRCKANSVVPSNKRENNISSSVLKISKSQNQ
Sbjct: 181 QGRDNVHKENPFLDVTFYKETKSPFHEIKNRCKANSVVPSNKRENNISSSVLKISKSQNQ 240
Query: 241 PSLEIAKPSYFRDSGTISVPQFPMDLNSKMSSVYLKEIAKKKNDKKEAYVRDFTNIYWSQ 300
PSLEIAKPSYFRDSGTISVPQFPMDLNSKMSSVYLKEIAKKKNDKKEAYVRDFTNIYWSQ
Sbjct: 241 PSLEIAKPSYFRDSGTISVPQFPMDLNSKMSSVYLKEIAKKKNDKKEAYVRDFTNIYWSQ 300
Query: 301 NRPDVKKQKLQNDKKTVEAENIFSKCYENDYPSLSSQNTCKRKDLISSNYCNCSSIQCNV 360
NRPDVKKQKLQNDKKTVEAENIFSKCYENDYPSLSSQNTCKRKDLISSNYCNCSSIQCNV
Sbjct: 301 NRPDVKKQKLQNDKKTVEAENIFSKCYENDYPSLSSQNTCKRKDLISSNYCNCSSIQCNV 360
Query: 361 RDSRKNFAILENANWEEAECLDSYVLTRLEKSQNWDCNVRHILRRNRGNCWIINNCKTKC 420
RDSRKNFAILENANWEEAECLDSYVLTRLEKSQNWDCNVRHILRRNRGNCWIINNCKTKC
Sbjct: 361 RDSRKNFAILENANWEEAECLDSYVLTRLEKSQNWDCNVRHILRRNRGNCWIINNCKTKC 420
Query: 421 ENMKKTEEKWNWLLLLEIDLLSKEDYHCAKVINAYEEQSKLLVREILGSQTALITTVWLN 480
ENMKKTEEKWNWLLLLEIDLLSKEDYHCAKVINAYEEQSKLLVREILGSQTALITTVWLN
Sbjct: 421 ENMKKTEEKWNWLLLLEIDLLSKEDYHCAKVINAYEEQSKLLVREILGSQTALITTVWLN 480
Query: 481 GKGENDNTLQLRYNTTQKVFHVNNPFESFIIEIFYFHKSISGNKKDNSILTCCNILKCKK 540
GKGENDNTLQLRYNTTQKVFHVNNPFESFIIEIFYFHKSISGNKKDNSILTCCNILKCKK
Sbjct: 481 GKGENDNTLQLRYNTTQKVFHVNNPFESFIIEIFYFHKSISGNKKDNSILTCCNILKCKK 540
Query: 541 QIGIIGIQNLITRNMNTNIKNGILSIYLQDSVSEPLDILLKTNIAFLLNNFDSLTRIEND 600
QIGIIGIQNLITRNMNTNIKNGILSIYLQDSVSEPLDILLKTNIAFLLNNFDSLTRIEND
Sbjct: 541 QIGIIGIQNLITRNMNTNIKNGILSIYLQDSVSEPLDILLKTNIAFLLNNFDSLTRIEND 600
Query: 601 FELEEECIFKCMLYLKYPKNIVENHTAYLVKILTSSRLLEDNMKPMLKKRKLFRTEQVFE 660
FELEEECIFKCMLYLKYPKNIVENHTAYLVKILTSSRLLEDNMKPMLKKRKLFRTEQVFE
Sbjct: 601 FELEEECIFKCMLYLKYPKNIVENHTAYLVKILTSSRLLEDNMKPMLKKRKLFRTEQVFE 660
Query: 661 KSKKKLINSFSMTTQNTGFPIFETYEKIPLLMDFDDMDEISLIREITCQNMSCPQQVVNV 720
KSKKKLINSFSMTTQNTGFPIFETYEKIPLLMDFDDMDEISLIREITCQNMSCPQQVVNV
Sbjct: 661 KSKKKLINSFSMTTQNTGFPIFETYEKIPLLMDFDDMDEISLIREITCQNMSCPQQVVNV 720
Query: 721 ENWAHYNSSTVKAHGNSCPQFIQNNRGYINENFYEVNMHSQDLNMERKQGHNKISNFDCE 780
ENWAHYNSSTVKAHGNSCPQFIQNNRGYINENFYEVNMHSQDLNMERKQGHNKISNFDCE
Sbjct: 721 ENWAHYNSSTVKAHGNSCPQFIQNNRGYINENFYEVNMHSQDLNMERKQGHNKISNFDCE 780
Query: 781 HIFEDLCNVRQQAIPASHNIIHNEETHTTSITQVLNFWNLLSEIEEKKYDLILKEEVKVT 840
HIFEDLCNVRQQAIPASHNIIHNEETHTTSITQVLNFWNLLSEIEEKKYDLILKEEVKVT
Sbjct: 781 HIFEDLCNVRQQAIPASHNIIHNEETHTTSITQVLNFWNLLSEIEEKKYDLILKEEVKVT 840
Query: 841 AESLTNSCQVHKDTKIEKEEKDSFFPMDDMFSVQSVSLISKEVNVEENKYVNQNYVTNTN 900
AESLTNSCQVHKDTKIEKEEKDSFFPMDDMFSVQSVSLISKEVNVEENKYVNQNYVTNTN
Sbjct: 841 AESLTNSCQVHKDTKIEKEEKDSFFPMDDMFSVQSVSLISKEVNVEENKYVNQNYVTNTN 900
Query: 901 EYESILPEREIANSKDFHRKNDSALYINHQFETGLSEGNDECFQDLAAKYLSTEALTIVK 960
EYESILPEREIANSKDFHRKNDSALYINHQFETGLSEGNDECFQDLAAKYLSTEALTIVK
Sbjct: 901 EYESILPEREIANSKDFHRKNDSALYINHQFETGLSEGNDECFQDLAAKYLSTEALTIVK 960
Query: 961 DFEMKRKFDLVLEELRMFHEISRENELLSTVETNNGQENYFGENDAEKVKMEIEKDLKMV 1020
DFEMKRKFDLVLEELRMFHEISRENELLSTVETNNGQENYFGENDAEKVKMEIEKDLKMV
Sbjct: 961 DFEMKRKFDLVLEELRMFHEISRENELLSTVETNNGQENYFGENDAEKVKMEIEKDLKMV 1020
Query: 1021 VVNKIRASSSFHDTIAGPNMGKSHQSLFKWKTVPNNGEQEVPNESCYPSRSEEELLYSTS 1080
VVNKIRASSSFHDTIAGPNMGKSHQSLFKWKTVPNNGEQEVPNESCYPSRSEEELLYSTS
Sbjct: 1021 VVNKIRASSSFHDTIAGPNMGKSHQSLFKWKTVPNNGEQEVPNESCYPSRSEEELLYSTS 1080
Query: 1081 EKDCETPLPKRPAFLPDECKEEFNYLLRGGSHFPHGISRVRPLKTCSRPIRIGLSRKARI 1140
EKDCETPLPKRPAFLPDECKEEFNYLLRGGSHFPHGISRVRPLKTCSRPIRIGLSRKARI
Sbjct: 1081 EKDCETPLPKRPAFLPDECKEEFNYLLRGGSHFPHGISRVRPLKTCSRPIRIGLSRKARI 1140
Query: 1141 KQLHPYLKQMCYGNLKENF 1159
KQLHPYLKQMCYGNLKENF
Sbjct: 1141 KQLHPYLKQMCYGNLKENF 1159
>gi|217416398 hyaluronan-mediated motility receptor isoform c [Homo
sapiens]
Length = 709
Score = 40.4 bits (93), Expect = 0.010
Identities = 124/593 (20%), Positives = 235/593 (39%), Gaps = 66/593 (11%)
Query: 124 DSDLRASGRSEAGLHDREAFSVHRSNSSKAGVSQLLPSTSIHDIHGIRNENRKQQFVQGR 183
D+ L AS R + + + + L T + + N +++
Sbjct: 59 DTTLPASARKVKSSESKIRVLLQERGAQDRRIQDL--ETELEKMEARLNAALREKTSLSA 116
Query: 184 DNVHKENPFLDVTFYKET-KSPFHEIKNR-----CKANSVVPSNKRENNISSSVLKISKS 237
+N E +++T E KS F E N+ + NKRE + + K +
Sbjct: 117 NNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRETKMRGMMAK--QE 174
Query: 238 QNQPSLEIAKPSYFRDSGTISVPQFPMDLNSKMSSVYLKEIAKK-KNDKKEAYVRDFTNI 296
+ L++ + S G I+ L K+ S+ ++I +K + +K Y+ +
Sbjct: 175 GMEMKLQVTQRSLEESQGKIA------QLEGKLVSIEKEKIDEKSETEKLLEYIEEI--- 225
Query: 297 YWSQNRPDVKKQKLQNDKKTVEAENIFSKCYENDYPSLSSQNTCKRKDLISSNYCNCSSI 356
S V+K KL D +E EN+ K ND LS + + + +I S ++
Sbjct: 226 --SCASDQVEKYKL--DIAQLE-ENLKEK---ND-EILSLKQSLEENIVILSKQVEDLNV 276
Query: 357 QCNVRDSRK------NFAILENANWEEAECLDSYVLTRLE--KSQNWDCNVRHILRRNRG 408
+C + + K N EN N E ++L + E K Q + + +L++ +
Sbjct: 277 KCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKE 336
Query: 409 NCWIINN--CKTKCENMKKTE--EKWNWLLLLEIDLLSKEDYHCAKVINAYEEQS----- 459
++ C + E +K+ E+ L E+D L +++ +++ EE++
Sbjct: 337 LSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAE 396
Query: 460 --KLLVREILGSQTALITTVWLNGKGENDNTLQLRYNT-TQKVFHVNNPFESFIIEIFYF 516
KLL ++ G + L + + + LQ +Y++ Q + V FES+
Sbjct: 397 ELKLLEEKLKGKEAELEKSSAAHTQA--TLLLQEKYDSMVQSLEDVTAQFESYKA---LT 451
Query: 517 HKSISGNKKDNSILTCCNILKCKKQIGIIGIQNLITRNMNTNIKNGILSIYLQDSVSEPL 576
I K +NS L K K + Q L T + N +L + + ++ E
Sbjct: 452 ASEIEDLKLENSSLQ-EKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKE-- 508
Query: 577 DILLKTNIAFLLNNFDSLTRIENDFELEEECIFKCMLYLKYPKNIVENHTAYLVKILTSS 636
+ + ++FL +T ++N + +EE K + + K EN TA L + +
Sbjct: 509 TEIKEITVSFL----QKITDLQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKW 564
Query: 637 RLLEDNMKPMLKKRKLFRTE-QVFEKSKKKLINSFSMTTQNTGFPIFETYEKI 688
RLL + + K K F+ + FE K+ L+N + I ++Y K+
Sbjct: 565 RLLYEE---LYNKTKPFQLQLDAFEVEKQALLNEHGAAQEQLN-KIRDSYAKL 613
>gi|217272804 hyaluronan-mediated motility receptor isoform d [Homo
sapiens]
Length = 638
Score = 39.7 bits (91), Expect = 0.017
Identities = 107/490 (21%), Positives = 202/490 (41%), Gaps = 58/490 (11%)
Query: 221 NKRENNISSSVLKISKSQNQPSLEIAKPSYFRDSGTISVPQFPMDLNSKMSSVYLKEIAK 280
NKRE + + K + + L++ + S G I+ L K+ S+ ++I +
Sbjct: 89 NKRETKMRGMMAK--QEGMEMKLQVTQRSLEESQGKIA------QLEGKLVSIEKEKIDE 140
Query: 281 K-KNDKKEAYVRDFTNIYWSQNRPDVKKQKLQNDKKTVEAENIFSKCYENDYPSLSSQNT 339
K + +K Y+ + S V+K KL D +E EN+ K ND LS + +
Sbjct: 141 KSETEKLLEYIEEI-----SCASDQVEKYKL--DIAQLE-ENLKEK---ND-EILSLKQS 188
Query: 340 CKRKDLISSNYCNCSSIQCNVRDSRK------NFAILENANWEEAECLDSYVLTRLE--K 391
+ +I S +++C + + K N EN N E ++L + E K
Sbjct: 189 LEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREK 248
Query: 392 SQNWDCNVRHILRRNRGNCWIINN--CKTKCENMKKTE--EKWNWLLLLEIDLLSKEDYH 447
Q + + +L++ + ++ C + E +K+ E+ L E+D L +++
Sbjct: 249 LQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQ 308
Query: 448 CAKVINAYEEQS-------KLLVREILGSQTALITTVWLNGKGENDNTLQLRYNT-TQKV 499
+++ EE++ KLL ++ G + L + + + LQ +Y++ Q +
Sbjct: 309 AERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQA--TLLLQEKYDSMVQSL 366
Query: 500 FHVNNPFESFIIEIFYFHKSISGNKKDNSILTCCNILKCKKQIGIIGIQNLITRNMNTNI 559
V FES+ I K +NS L K K + Q L T + N
Sbjct: 367 EDVTAQFESYKA---LTASEIEDLKLENSSLQ-EKAAKAGKNAEDVQHQILATESSNQEY 422
Query: 560 KNGILSIYLQDSVSEPLDILLKTNIAFLLNNFDSLTRIENDFELEEECIFKCMLYLKYPK 619
+L + + ++ E + + ++FL +T ++N + +EE K + + K
Sbjct: 423 VRMLLDLQTKSALKE--TEIKEITVSFL----QKITDLQNQLKQQEEDFRKQLEDEEGRK 476
Query: 620 NIVENHTAYLVKILTSSRLLEDNMKPMLKKRKLFRTE-QVFEKSKKKLINSFSMTTQNTG 678
EN TA L + + RLL + + K K F+ + FE K+ L+N +
Sbjct: 477 AEKENTTAELTEEINKWRLLYEE---LYNKTKPFQLQLDAFEVEKQALLNEHGAAQEQLN 533
Query: 679 FPIFETYEKI 688
I ++Y K+
Sbjct: 534 -KIRDSYAKL 542
>gi|217272802 hyaluronan-mediated motility receptor isoform a [Homo
sapiens]
Length = 725
Score = 39.7 bits (91), Expect = 0.017
Identities = 107/490 (21%), Positives = 202/490 (41%), Gaps = 58/490 (11%)
Query: 221 NKRENNISSSVLKISKSQNQPSLEIAKPSYFRDSGTISVPQFPMDLNSKMSSVYLKEIAK 280
NKRE + + K + + L++ + S G I+ L K+ S+ ++I +
Sbjct: 176 NKRETKMRGMMAK--QEGMEMKLQVTQRSLEESQGKIA------QLEGKLVSIEKEKIDE 227
Query: 281 K-KNDKKEAYVRDFTNIYWSQNRPDVKKQKLQNDKKTVEAENIFSKCYENDYPSLSSQNT 339
K + +K Y+ + S V+K KL D +E EN+ K ND LS + +
Sbjct: 228 KSETEKLLEYIEEI-----SCASDQVEKYKL--DIAQLE-ENLKEK---ND-EILSLKQS 275
Query: 340 CKRKDLISSNYCNCSSIQCNVRDSRK------NFAILENANWEEAECLDSYVLTRLE--K 391
+ +I S +++C + + K N EN N E ++L + E K
Sbjct: 276 LEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREK 335
Query: 392 SQNWDCNVRHILRRNRGNCWIINN--CKTKCENMKKTE--EKWNWLLLLEIDLLSKEDYH 447
Q + + +L++ + ++ C + E +K+ E+ L E+D L +++
Sbjct: 336 LQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQ 395
Query: 448 CAKVINAYEEQS-------KLLVREILGSQTALITTVWLNGKGENDNTLQLRYNT-TQKV 499
+++ EE++ KLL ++ G + L + + + LQ +Y++ Q +
Sbjct: 396 AERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQA--TLLLQEKYDSMVQSL 453
Query: 500 FHVNNPFESFIIEIFYFHKSISGNKKDNSILTCCNILKCKKQIGIIGIQNLITRNMNTNI 559
V FES+ I K +NS L K K + Q L T + N
Sbjct: 454 EDVTAQFESYKA---LTASEIEDLKLENSSLQ-EKAAKAGKNAEDVQHQILATESSNQEY 509
Query: 560 KNGILSIYLQDSVSEPLDILLKTNIAFLLNNFDSLTRIENDFELEEECIFKCMLYLKYPK 619
+L + + ++ E + + ++FL +T ++N + +EE K + + K
Sbjct: 510 VRMLLDLQTKSALKE--TEIKEITVSFL----QKITDLQNQLKQQEEDFRKQLEDEEGRK 563
Query: 620 NIVENHTAYLVKILTSSRLLEDNMKPMLKKRKLFRTE-QVFEKSKKKLINSFSMTTQNTG 678
EN TA L + + RLL + + K K F+ + FE K+ L+N +
Sbjct: 564 AEKENTTAELTEEINKWRLLYEE---LYNKTKPFQLQLDAFEVEKQALLNEHGAAQEQLN 620
Query: 679 FPIFETYEKI 688
I ++Y K+
Sbjct: 621 -KIRDSYAKL 629
>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
sapiens]
Length = 724
Score = 39.7 bits (91), Expect = 0.017
Identities = 107/490 (21%), Positives = 202/490 (41%), Gaps = 58/490 (11%)
Query: 221 NKRENNISSSVLKISKSQNQPSLEIAKPSYFRDSGTISVPQFPMDLNSKMSSVYLKEIAK 280
NKRE + + K + + L++ + S G I+ L K+ S+ ++I +
Sbjct: 175 NKRETKMRGMMAK--QEGMEMKLQVTQRSLEESQGKIA------QLEGKLVSIEKEKIDE 226
Query: 281 K-KNDKKEAYVRDFTNIYWSQNRPDVKKQKLQNDKKTVEAENIFSKCYENDYPSLSSQNT 339
K + +K Y+ + S V+K KL D +E EN+ K ND LS + +
Sbjct: 227 KSETEKLLEYIEEI-----SCASDQVEKYKL--DIAQLE-ENLKEK---ND-EILSLKQS 274
Query: 340 CKRKDLISSNYCNCSSIQCNVRDSRK------NFAILENANWEEAECLDSYVLTRLE--K 391
+ +I S +++C + + K N EN N E ++L + E K
Sbjct: 275 LEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREK 334
Query: 392 SQNWDCNVRHILRRNRGNCWIINN--CKTKCENMKKTE--EKWNWLLLLEIDLLSKEDYH 447
Q + + +L++ + ++ C + E +K+ E+ L E+D L +++
Sbjct: 335 LQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQ 394
Query: 448 CAKVINAYEEQS-------KLLVREILGSQTALITTVWLNGKGENDNTLQLRYNT-TQKV 499
+++ EE++ KLL ++ G + L + + + LQ +Y++ Q +
Sbjct: 395 AERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQA--TLLLQEKYDSMVQSL 452
Query: 500 FHVNNPFESFIIEIFYFHKSISGNKKDNSILTCCNILKCKKQIGIIGIQNLITRNMNTNI 559
V FES+ I K +NS L K K + Q L T + N
Sbjct: 453 EDVTAQFESYKA---LTASEIEDLKLENSSLQ-EKAAKAGKNAEDVQHQILATESSNQEY 508
Query: 560 KNGILSIYLQDSVSEPLDILLKTNIAFLLNNFDSLTRIENDFELEEECIFKCMLYLKYPK 619
+L + + ++ E + + ++FL +T ++N + +EE K + + K
Sbjct: 509 VRMLLDLQTKSALKE--TEIKEITVSFL----QKITDLQNQLKQQEEDFRKQLEDEEGRK 562
Query: 620 NIVENHTAYLVKILTSSRLLEDNMKPMLKKRKLFRTE-QVFEKSKKKLINSFSMTTQNTG 678
EN TA L + + RLL + + K K F+ + FE K+ L+N +
Sbjct: 563 AEKENTTAELTEEINKWRLLYEE---LYNKTKPFQLQLDAFEVEKQALLNEHGAAQEQLN 619
Query: 679 FPIFETYEKI 688
I ++Y K+
Sbjct: 620 -KIRDSYAKL 628
>gi|195963418 tubulin tyrosine ligase-like family, member 6 isoform
1 [Homo sapiens]
Length = 891
Score = 37.0 bits (84), Expect = 0.11
Identities = 55/254 (21%), Positives = 96/254 (37%), Gaps = 51/254 (20%)
Query: 754 YEVNMHSQDLNMERKQGHN-KISNFDC---------EHIFEDLCNVRQQAIPASHNIIHN 803
Y +N HS + + + G K+S F E I+ D+ +V + + ++H II +
Sbjct: 314 YSINKHSSNFSRDAHSGSKRKLSTFSAYLEDHSYNVEQIWRDIEDVIIKTLISAHPIIRH 373
Query: 804 EETHTTSITQVLNFWNLLSEIEEKKYDLILKEEVKVTAESLTNSCQVHKDTKIEKEEKDS 863
HT LN + E +D++L ++K + +S D++++KE KD
Sbjct: 374 NY-HTCFPNHTLNS----ACFEILGFDILLDHKLKPWLLEVNHSPSFSTDSRLDKEVKDG 428
Query: 864 FFPMDDMFSVQSVS-------------------LISKEVNVEENKYVNQNYVTNTNEYES 904
D + + S S+E+ +EE K + T YE
Sbjct: 429 LL-YDTLVLINLESCDKKKVLEEERQRGQFLQQCCSREMRIEEAKGFRAVQLKKTETYEK 487
Query: 905 --------ILPEREIANSKDFHRKNDSALYINHQFETGLSEGNDECFQDLAAKYLSTEAL 956
I P + F + N+S L+ N E + Q+L K
Sbjct: 488 ENCGGFRLIYPSLNSEKYEKFFQDNNS-LFQNTVASRAREEYARQLIQELRLKREK---- 542
Query: 957 TIVKDFEMKRKFDL 970
K F+MK+K ++
Sbjct: 543 ---KPFQMKKKVEM 553
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 36.2 bits (82), Expect = 0.19
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 277 EIAKKKNDKKEAYVRDFTNIYWSQNRPDVKKQKLQNDKKTVEAENIFSKCYENDYPSLSS 336
+I + + K +A+++D + + +QKLQ +K T EA+ K E + L
Sbjct: 939 QILQNEKKKMQAHIQDLEE---QLDEEEGARQKLQLEKVTAEAK---IKKMEEEILLLED 992
Query: 337 QNT--CKRKDLISSNYCNCSSIQCNVRDSRKNFAILENANWEEAECLDSYVLTRLEKSQ 393
QN+ K K L+ CSS + KN A + N + E + S + RL+K +
Sbjct: 993 QNSKFIKEKKLMEDRIAECSSQLAEEEEKAKNLAKIRN----KQEVMISDLEERLKKEE 1047
>gi|153945715 myosin VC [Homo sapiens]
Length = 1742
Score = 36.2 bits (82), Expect = 0.19
Identities = 86/433 (19%), Positives = 175/433 (40%), Gaps = 54/433 (12%)
Query: 630 VKILTSSRLLEDNMKPMLKKRKLFRTEQVFEKSKKKLINSFSMTTQNTGFPIFETYEKIP 689
+K+ + L++ M + K+ LF Q E+ + L SF + TQ+ I E+I
Sbjct: 977 LKLQEKTEELKEKMDNLTKQ--LFDDVQKEERQRMLLEKSFELKTQDYEKQIQSLKEEIK 1034
Query: 690 LLMDFDDMDEISLI--REITCQNMSC-----PQQVVNVENWAHYNSSTVKAHGNSCPQFI 742
L D + M L+ +T + +QV + + ++A + +
Sbjct: 1035 ALKD-EKMQLQHLVEGEHVTSDGLKAEVARLSKQVKTISEF-EKEIELLQAQKIDVEKHV 1092
Query: 743 QNNRGYINENFYEVN---MHSQDLNMERKQGHNKISNFDCEHIFED------------LC 787
Q+ + + E E+ + S D+ R +++S D EH+ ED
Sbjct: 1093 QSQKREMREKMSEITKQLLESYDIEDVR----SRLSVEDLEHLNEDGELWFAYEGLKKAT 1148
Query: 788 NVRQQAIPASHNIIHNE----ETHTTSITQVLNFWNLLSEIEEKKYDLILKEEVKVTAES 843
V + + + E ++Q +N L E + I E ++T+E+
Sbjct: 1149 RVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHEVTRLTSEN 1208
Query: 844 LTNSCQVHKDTKIEKEEKDSFFPMDDMFSVQSVSL--ISKEVN-VEENKYVNQNYVTNTN 900
+ + +++EK+++D +++ L +S +++ +E + + + N
Sbjct: 1209 MMIPDFKQQISELEKQKQDLEIRLNEQAEKMKGKLEELSNQLHRSQEEEGTQRKALEAQN 1268
Query: 901 EYESILPEREIANSKDFHRKNDSALYINHQFETGLSEGNDECFQDLAAKYLSTEALTIVK 960
E + E+ I ++ +D ++ QFET E +C A L+ E + +
Sbjct: 1269 EIHTKEKEKLIDKIQEMQEASD---HLKKQFET---ESEVKCNFRQEASRLTLENRDLEE 1322
Query: 961 DFEMKRKFDLVLEELR-MFHEISRENELLSTVETNNGQENYFG-----ENDAEKVKMEIE 1014
+ +MK D V+++L+ +S+ + V +++G + Y G D K+ +
Sbjct: 1323 ELDMK---DRVIKKLQDQVKTLSKTIGKANDVHSSSGPKEYLGMLQYKREDEAKLIQNLI 1379
Query: 1015 KDLKM--VVVNKI 1025
DLK VVVN I
Sbjct: 1380 LDLKPRGVVVNMI 1392
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 35.4 bits (80), Expect = 0.32
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Query: 918 HRKNDSALYINHQFETGLSEGNDECFQDLAAKYLSTEALTIVKDFEMKRKFDLVLEELRM 977
HR +DS + + E E D + L K + L KD +K K D +L
Sbjct: 1371 HRLSDS-IAATSELERKEHEQTDSEIKQLKEKQDVLQKLLKEKDLLIKAKSDQLLSSNEN 1429
Query: 978 FHEISRENELLSTVETNNGQENYFGENDAEKVKMEIEKDLKMVVVNKIRASSSFHDTIAG 1037
F ENELL TN + E D K+K E EK +V R + + +
Sbjct: 1430 FTNKVNENELLRQAVTNLKERILILEMDIGKLKGENEK-----IVETYRGKETEYQALQE 1484
Query: 1038 PNM 1040
NM
Sbjct: 1485 TNM 1487
Score = 33.5 bits (75), Expect = 1.2
Identities = 79/451 (17%), Positives = 174/451 (38%), Gaps = 61/451 (13%)
Query: 595 TRIENDFELEEECIFKCMLYLKYPKNIVENHTAYLVKILTSSRLLEDNMKPMLKKRKLFR 654
T E + L + + + L+ + EN L + + L EDN+K ++ L +
Sbjct: 370 TMTEKERILAQSASVEEVFRLQQALSDAENEIMRLSSLNQDNSLAEDNLKLKMRIEVLEK 429
Query: 655 TEQVFEKSKKKLINSFSMTTQNTGFPIFETYEKIPLLMDFDDMDEISLIREITCQ--NMS 712
+ + + K++L S+ N + + ++ + +D ++ ++ L E Q N S
Sbjct: 430 EKSLLSQEKEEL--QMSLLKLNNEYEVIKSTATRDISLD-SELHDLRLNLEAKEQELNQS 486
Query: 713 CPQQ---VVNVENWAHYNSSTVKAHGNSCPQFIQNNRGYINENFYEVNMHSQDLNMERKQ 769
++ + +E N K Q + NE ++ QDLN E+K+
Sbjct: 487 ISEKETLIAEIEELDRQNQEATKHMILIKDQLSKQQ----NEGDSIISKLKQDLNDEKKR 542
Query: 770 GHNKISNFDCEHIFEDLCNVRQQAIPASHNIIHNE----ETHTTSITQVLNFWNLLSEIE 825
H + +D ++ ++ +I +E + H T NL+ ++
Sbjct: 543 VH---------QLEDDKMDITKELDVQKEKLIQSEVALNDLHLTKQKLEDKVENLVDQLN 593
Query: 826 E--------KKYDLILKEEVKVTAESLTNSCQVHKDTKIEKEEKDSFFPMDDMFSVQSVS 877
+ +K +L LKE ++ E L+ ++ + + + D + +
Sbjct: 594 KSQESNVSIQKENLELKEHIRQNEEELS---RIRNELMQSLNQDSNSNFKDTLLKEREAE 650
Query: 878 LISKEVNVEENKYVNQNYVTNTNEYESILPEREIANSKDFHRKNDSALYINHQFETGLSE 937
+ + + N+ E + +N+N + + + ++ N K D + HQ E L+
Sbjct: 651 VRNLKQNLSELEQLNEN-------LKKVAFDVKMENEKLVLACED----VRHQLEECLAG 699
Query: 938 GNDECFQDLAAKYLSTEALTIVKDFEMKR---KFDLVLEELRMFHEISR-ENELLSTVET 993
N LS E TIV+ +M++ + +L + R+ E ++ E +
Sbjct: 700 NNQ----------LSLEKNTIVETLKMEKGEIEAELCWAKKRLLEEANKYEKTIEELSNA 749
Query: 994 NNGQENYFGENDAEKVKMEIEKDLKMVVVNK 1024
N + +K+ +KD+++ + K
Sbjct: 750 RNLNTSALQLEHEHLIKLNQKKDMEIAELKK 780
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 35.4 bits (80), Expect = 0.32
Identities = 80/407 (19%), Positives = 170/407 (41%), Gaps = 51/407 (12%)
Query: 592 DSLTRIENDFE-LEEECI-FKCMLY--LKYPKNIVENHTAYLVKILTSSRLLEDNMKPML 647
+ L+R + F+ L++ECI K L L+ KN+ A L K+ + + LE+N++
Sbjct: 398 EELSRQQRSFQTLDQECIQMKARLTQELQQAKNMHNVLQAELDKLTSVKQQLENNLEEF- 456
Query: 648 KKRKLFRTEQVFEKSKKKLINSFSMTTQNTGFPIFETYEKIPLLMDFDDMDEISLIREIT 707
K+KL R EQ F+ S+ K +N E +K L+ + + +
Sbjct: 457 -KQKLCRAEQAFQASQIK---------ENELRRSMEEMKKENNLLKSHSEQKAREVCHLE 506
Query: 708 CQNMSCPQQVVNVENWAHYNSSTVKAHGNSCPQFIQNNRGYINENFYEVNMHSQDL---N 764
+ + Q + +N+A +KA S +++ + IN+ + + L +
Sbjct: 507 AELKNIKQCLNQSQNFA----EEMKAKNTSQETMLRDLQEKINQQENSLTLEKLKLAVAD 562
Query: 765 MERKQGHNKISNFDCEHIFEDLCNVRQQAIPASHNIIHNEETHTTSITQVLNFWNLLSEI 824
+E+++ DC +DL R+ I ++ + E + ++ L E+
Sbjct: 563 LEKQR--------DCS---QDLLKKREHHIEQLNDKLSKTEKESKALLSAL-------EL 604
Query: 825 EEKKYDLILKEEVKVTAESLTNSCQVHKDTKIEKEEKDSFFPMDDMFSVQSVSLISKEVN 884
++K+Y+ + +E+ + N + T++E E+++ ++ + + I
Sbjct: 605 KKKEYEELKEEKTLFSCWKSENEKLL---TQMESEKENLQSKINHLETCLKTQQIKSH-- 659
Query: 885 VEENKYVNQNYVTNTNEYESILPEREIANSKDFHRKNDSALYINHQFETGLSEGNDECFQ 944
E N+ V + N I + +SK + Y+ Q + S+ + +
Sbjct: 660 -EYNERVRTLEMDRENLSVEIRNLHNVLDSKSVEVETQKLAYMELQQKAEFSDQKHQ--K 716
Query: 945 DLAAKYLSTEALT-IVKDFEMKRKF--DLVLEELRMFHEISRENELL 988
++ L T LT V+D E K + + ++++ R + ++ E E L
Sbjct: 717 EIENMCLKTSQLTGQVEDLEHKLQLLSNEIMDKDRCYQDLHAEYESL 763
Score = 32.0 bits (71), Expect = 3.5
Identities = 41/214 (19%), Positives = 85/214 (39%), Gaps = 15/214 (7%)
Query: 784 EDLCNVRQQAIPASHN---IIHNEETHTTSITQVLNFWNLL-SEIEEKKYDLILKEEVKV 839
ED+ N++ + S+ ++H E + +LN L S++ ++ L+ K E +
Sbjct: 1767 EDIHNLQLRVKETSNENLRLLHVIEDRDRKVESLLNEMKELDSKLHLQEVQLMTKIEACI 1826
Query: 840 TAESLTNSCQVHKDTKIEKEEKDSFFPMDDMFSVQSVSLISKEVNVEENKYVNQNYVTNT 899
E + + EK E S + + V++ ++ ++ + +K ++ N
Sbjct: 1827 ELEKIVGELKKENSDLSEKLEYFSCDHQELLQRVETSEGLNSDLEMHADKSSREDIGDNV 1886
Query: 900 NEYESILPEREIANSKDFHRKNDSALYINHQFETGLSEGNDECFQDLAAKYLSTEALTIV 959
+ ER + + R I H+ + + + + TE L +
Sbjct: 1887 AKVNDSWKERFLDVENELSRIRSEKASIEHE----------ALYLEADLEVVQTEKLCLE 1936
Query: 960 KDFEMKRKFDLVLEELRMFHEISRENELLSTVET 993
KD E K+K + LEE + S N+L ++T
Sbjct: 1937 KDNENKQKVIVCLEE-ELSVVTSERNQLRGELDT 1969
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 35.0 bits (79), Expect = 0.41
Identities = 59/262 (22%), Positives = 100/262 (38%), Gaps = 40/262 (15%)
Query: 138 HDREAFSVHRSNSSKAGVSQLLPSTSIHDIHGIRNENRKQQFVQGRDNVHKENPFLDVTF 197
H+ E +S+S SQ + S + + +++ + K NP D+
Sbjct: 167 HENEQSKKSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKR 226
Query: 198 YKETKSPFHEIKNRCKANSVVPS--------------------NKRENNISSSVLKISKS 237
K + P EI C NS+ N +NN + LK +K
Sbjct: 227 SKTSNDPISEI---CSENSLNVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKY 283
Query: 238 QNQPSLEIAKPSYFRDSGTISVPQFPMDLNSKMSSVYLKEIAKKKNDKKEAYVRDFTNIY 297
+ + + AK S S S +SK +K+ KKK+ KK+ D +
Sbjct: 284 TKKDTKKNAKKS----SDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGD 339
Query: 298 WSQNRPDVK--KQKLQNDKK---------TVEAENIFSKCYENDYPSL--SSQNTCKRKD 344
R D K K+KL+ D K + + E+ +K ND +L +S+N K+KD
Sbjct: 340 SKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKD 399
Query: 345 LISSNYCNCSSIQCNVRDSRKN 366
+ S + ++S+K+
Sbjct: 400 AKKITFSTDSESELESKESQKD 421
>gi|237681119 breast cancer 1, early onset isoform 2 [Homo sapiens]
Length = 1884
Score = 34.7 bits (78), Expect = 0.54
Identities = 64/282 (22%), Positives = 110/282 (39%), Gaps = 35/282 (12%)
Query: 823 EIEEKKYDLILKEEVKVTAESLTNSCQVHKDTKIE--------KEEKDSFFPMDDMFSVQ 874
E+ + I EE ++ A+ L N+ +V K +EE +F Q
Sbjct: 836 EVNHSRETSIEMEESELDAQYLQNTFKVSKRQSFAPFSNPGNAEEECATFSAHSGSLKKQ 895
Query: 875 SVSLISKEVNVEENKYVNQNYV--TNTNEYESILP-----EREIANSKDFHRKNDSALYI 927
S + + EEN+ N++ + T + P ++ + N+K K S +
Sbjct: 896 SPKVTFECEQKEENQGKNESNIKPVQTVNITAGFPVVGQKDKPVDNAK-CSIKGGSRFCL 954
Query: 928 NHQF---ETGLSEGNDECFQDLAAKYLSTEALTIVKDFEMKRKFDLVLEELRMFHEISRE 984
+ QF ETGL N L L +K F + +LEE H +S E
Sbjct: 955 SSQFRGNETGLITPNKH---GLLQNPYRIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPE 1011
Query: 985 NEL--------LSTVETNNGQENYFGENDAEKVKMEIEKDLKMV--VVNKIRASSSFHDT 1034
E+ +ST+ NN +EN F E + + E+ V +N+I +S
Sbjct: 1012 REMGNENIPSTVSTISRNNIRENVFKEASSSNIN-EVGSSTNEVGSSINEIGSSDENIQA 1070
Query: 1035 IAGPNMGKSHQSLFKWKTV-PNNGEQEVPNESC-YPSRSEEE 1074
G N G ++ + + P +Q +P +C +P ++E
Sbjct: 1071 ELGRNRGPKLNAMLRLGVLQPEVYKQSLPGSNCKHPEIKKQE 1112
>gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens]
Length = 1816
Score = 34.7 bits (78), Expect = 0.54
Identities = 64/282 (22%), Positives = 110/282 (39%), Gaps = 35/282 (12%)
Query: 823 EIEEKKYDLILKEEVKVTAESLTNSCQVHKDTKIE--------KEEKDSFFPMDDMFSVQ 874
E+ + I EE ++ A+ L N+ +V K +EE +F Q
Sbjct: 789 EVNHSRETSIEMEESELDAQYLQNTFKVSKRQSFAPFSNPGNAEEECATFSAHSGSLKKQ 848
Query: 875 SVSLISKEVNVEENKYVNQNYV--TNTNEYESILP-----EREIANSKDFHRKNDSALYI 927
S + + EEN+ N++ + T + P ++ + N+K K S +
Sbjct: 849 SPKVTFECEQKEENQGKNESNIKPVQTVNITAGFPVVGQKDKPVDNAK-CSIKGGSRFCL 907
Query: 928 NHQF---ETGLSEGNDECFQDLAAKYLSTEALTIVKDFEMKRKFDLVLEELRMFHEISRE 984
+ QF ETGL N L L +K F + +LEE H +S E
Sbjct: 908 SSQFRGNETGLITPNKH---GLLQNPYRIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPE 964
Query: 985 NEL--------LSTVETNNGQENYFGENDAEKVKMEIEKDLKMV--VVNKIRASSSFHDT 1034
E+ +ST+ NN +EN F E + + E+ V +N+I +S
Sbjct: 965 REMGNENIPSTVSTISRNNIRENVFKEASSSNIN-EVGSSTNEVGSSINEIGSSDENIQA 1023
Query: 1035 IAGPNMGKSHQSLFKWKTV-PNNGEQEVPNESC-YPSRSEEE 1074
G N G ++ + + P +Q +P +C +P ++E
Sbjct: 1024 ELGRNRGPKLNAMLRLGVLQPEVYKQSLPGSNCKHPEIKKQE 1065
>gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]
Length = 1863
Score = 34.7 bits (78), Expect = 0.54
Identities = 64/282 (22%), Positives = 110/282 (39%), Gaps = 35/282 (12%)
Query: 823 EIEEKKYDLILKEEVKVTAESLTNSCQVHKDTKIE--------KEEKDSFFPMDDMFSVQ 874
E+ + I EE ++ A+ L N+ +V K +EE +F Q
Sbjct: 836 EVNHSRETSIEMEESELDAQYLQNTFKVSKRQSFAPFSNPGNAEEECATFSAHSGSLKKQ 895
Query: 875 SVSLISKEVNVEENKYVNQNYV--TNTNEYESILP-----EREIANSKDFHRKNDSALYI 927
S + + EEN+ N++ + T + P ++ + N+K K S +
Sbjct: 896 SPKVTFECEQKEENQGKNESNIKPVQTVNITAGFPVVGQKDKPVDNAK-CSIKGGSRFCL 954
Query: 928 NHQF---ETGLSEGNDECFQDLAAKYLSTEALTIVKDFEMKRKFDLVLEELRMFHEISRE 984
+ QF ETGL N L L +K F + +LEE H +S E
Sbjct: 955 SSQFRGNETGLITPNKH---GLLQNPYRIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPE 1011
Query: 985 NEL--------LSTVETNNGQENYFGENDAEKVKMEIEKDLKMV--VVNKIRASSSFHDT 1034
E+ +ST+ NN +EN F E + + E+ V +N+I +S
Sbjct: 1012 REMGNENIPSTVSTISRNNIRENVFKEASSSNIN-EVGSSTNEVGSSINEIGSSDENIQA 1070
Query: 1035 IAGPNMGKSHQSLFKWKTV-PNNGEQEVPNESC-YPSRSEEE 1074
G N G ++ + + P +Q +P +C +P ++E
Sbjct: 1071 ELGRNRGPKLNAMLRLGVLQPEVYKQSLPGSNCKHPEIKKQE 1112
>gi|119395734 breast cancer 2, early onset [Homo sapiens]
Length = 3418
Score = 34.3 bits (77), Expect = 0.71
Identities = 89/438 (20%), Positives = 147/438 (33%), Gaps = 105/438 (23%)
Query: 694 FDDMDEISL-----IREITCQNMSCPQQVVNVENWAHYNSSTVKAHGNSCPQFIQNNRGY 748
F D++ IS + I+ + C VV++ ++N TV N C +QNN
Sbjct: 1241 FSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNNKCQLILQNNIEM 1300
Query: 749 INENFYEVNMHSQDLNMERKQGHNKISNFDCEHIFEDLCNVRQQAIPASHNIIHNEETHT 808
F E + N E + N A SHN+ + +
Sbjct: 1301 TTGTFVEEITENYKRNTENED------------------NKYTAASRNSHNLEFDGSDSS 1342
Query: 809 TSITQVLNFWNLLSEIEEKKYDLILKEEVKVTAESLTNSCQVHKDTKIEKEEKDSFFPMD 868
+ T I + + DL+ ++ + + L+ +T+I+++ D F
Sbjct: 1343 KNDTVC---------IHKDETDLLFTDQHNICLK-LSGQFMKEGNTQIKEDLSDLTF--- 1389
Query: 869 DMFSVQSVSLISKEVNVEENKYVNQNYVTNTNEYESILPEREIANSKDFHRKNDSALYIN 928
E + NT+ E + + N KDF
Sbjct: 1390 -----------------LEVAKAQEACHGNTSNKEQLTATKTEQNIKDF----------- 1421
Query: 929 HQFETGLSEGNDECFQDLAAKYLST--EALTIVKDFEMKRKFDLVLEELRMFHEISRENE 986
E +D FQ + K +S E+ + +F FD EEL H S +E
Sbjct: 1422 --------ETSDTFFQTASGKNISVAKESFNKIVNF-----FDQKPEEL---HNFSLNSE 1465
Query: 987 LLSTVETNNGQENYFGENDAEKVKM------------------EIEKDLKMVVVNKIRAS 1028
L S + N + E D K K+ + E+D K+ K
Sbjct: 1466 LHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKI----KEPTL 1521
Query: 1029 SSFHDTIAGPNMGKSHQSLFKWKTVPNNGEQEVPNESCYPSRSEEELLYSTSEKDCETPL 1088
FH T +G + + +SL K K + + EQ + + + + L Y + KD E
Sbjct: 1522 LGFH-TASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELAC 1580
Query: 1089 PKRPAFLPDECKEEFNYL 1106
+CKE N L
Sbjct: 1581 ETIEITAAPKCKEMQNSL 1598
>gi|21735569 claspin [Homo sapiens]
Length = 1339
Score = 34.3 bits (77), Expect = 0.71
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 34/256 (13%)
Query: 834 KEEVKVTAESLTNSCQ---------VHKDTKIEKEEKDSFF--PMDDMFSVQSVSL-ISK 881
K + K E L N C +++ K+EK+S PM++ ++ S S K
Sbjct: 930 KSDKKENMEELLNLCSGKFTSQDASTPASSELNKQEKESSMGDPMEEALALCSGSFPTDK 989
Query: 882 EVNVEENKYVNQNYVTNTNEYESILPEREIANSKDFHRKNDSAL--YINHQFETGLSEGN 939
E EE ++ + V+N NE++S E E ++S ND AL + + E L
Sbjct: 990 EEEDEEEEFGDFRLVSNDNEFDS--DEDEHSDS-----GNDLALEDHEDDDEEELLKRSE 1042
Query: 940 DECFQDLAAKYLSTEALTIVKDFEMKRKFDLVLEELRMFHEISRENELLSTVETNNGQEN 999
Q KYL EA D + ++D EE+ + E + L S E + +
Sbjct: 1043 KLKRQMRLRKYLEDEAEVSGSDVGSEDEYD--GEEIDEYEEDVIDEVLPSDEELQSQIKK 1100
Query: 1000 YFGENDAEKVKMEIEKDLKMVVVNKIRASSSFHDTIAGPNMGKSHQSLFKWKTVPNNGEQ 1059
K ++ +K + + A H G F+WK + + +
Sbjct: 1101 IH-----MKTMLDDDKRQLRLYQERYLADGDLHSD------GPGRMRKFRWKNIDDASQM 1149
Query: 1060 EVPNESCYPSRSEEEL 1075
++ + ++EE+L
Sbjct: 1150 DLFHRDSDDDQTEEQL 1165
>gi|34740327 zinc finger protein 804A [Homo sapiens]
Length = 1209
Score = 33.5 bits (75), Expect = 1.2
Identities = 40/235 (17%), Positives = 93/235 (39%), Gaps = 29/235 (12%)
Query: 789 VRQQAIPASHNIIHNEETHTTSITQVLNFWNLLSEIEEKKYDLILKEEVKVTAESLTNSC 848
++Q + +N I +ETH +W S ++K+ L ++ T ES T
Sbjct: 568 IKQDTLDEKYNKIRLKETH--------EYWFHKSRRKKKRKKLCQHHHMEKTKESETRCK 619
Query: 849 QVHKDTKIEKEEKDSFFPMDDMFSVQSVSLI-----------SKEVNVEENKYVNQNYVT 897
+++ E K P+ + + + L+ S+ +++ +N+ + + + T
Sbjct: 620 MEAENSYTENAGKYLLEPISEKQYLAAEQLLDSHQLLDKRPKSESISLSDNEEMCKTWNT 679
Query: 898 NTNEYESILPEREIANSKDFHRKNDSALYINHQFETGLSEGN---------DECFQDLAA 948
N Y++I + + +A I H + L+ C QD +
Sbjct: 680 EYNTYDTISSKNHCKKNTILLNGQSNATMI-HSGKHNLTYSRTYCCWKTKMSSCSQDHRS 738
Query: 949 KYLSTEALTIVKDFEMKRKFDLVLEELRMFHEISRENELLSTVETNNGQENYFGE 1003
L + + ++ +KR ++ V+ E F+ R++ + + + ++N+ E
Sbjct: 739 LVLQNDMKHMSQNQAVKRGYNSVMNESERFYRKRRQHSHSYSSDESLNRQNHLPE 793
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 33.5 bits (75), Expect = 1.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 4 PQPTPRMAELRKPTSSLTPPEDPDSQPPSSKRLCLEEPGG 43
P+P P + R P +S PP++P S+PPS EP G
Sbjct: 158 PRPAPGLEPQRGPAAS--PPQEPSSRPPSPPAGLSTEPAG 195
>gi|148596998 coiled-coil domain containing 122 [Homo sapiens]
Length = 273
Score = 33.5 bits (75), Expect = 1.2
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 758 MHSQDLNMERKQGH--NKISNFDCEHIFEDLCNVRQQAIPASHNIIHNE-----ETHTTS 810
+H L + K H N FD E ED H I +N + H S
Sbjct: 88 LHCDSLETQIKSLHSENVKLKFDIETAQEDF---------EEHMIKYNAYYAKIKAHKNS 138
Query: 811 ITQVLNFWNLLSEIEEKKYDLILKEEVKVTAESLTNSCQVHKDTKIEKEEKDSFFPMDDM 870
+ +V + W+ ++E+ EK+ D + K +K E L Q +I + ++D D +
Sbjct: 139 LGEVESKWSFMTELHEKR-DFVKK--LKTMKEELMQDLQNPGGNRITQVQEDITNLKDKI 195
Query: 871 FSVQSVSLISKEVNVEENKYVNQ 893
+V+ S+I K +EE K ++
Sbjct: 196 ITVKE-SIIEKTCFLEEEKKTHE 217
>gi|50593524 hypothetical protein LOC119392 isoform b [Homo sapiens]
Length = 232
Score = 33.5 bits (75), Expect = 1.2
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 20/155 (12%)
Query: 833 LKEEVKVTAESLTNSCQVHKDTKIEKEEKDSFFPMDDMFSVQSVSLISKEVNVEENKYVN 892
L+E ++ T S +S V K K+E EE D F S + L + E K+++
Sbjct: 38 LRERLRKTRFSFNSSYNVVKRLKVESEENDQTFSEKPASSTEENCLEFQ----ESFKHID 93
Query: 893 QNYVTNTNEYESILPEREIANSKDFHRKNDSALYINHQFETGLSEGNDECFQDLAAKYLS 952
+ NTN ++ L + S+ + SAL N+ + L + L+
Sbjct: 94 SEFEENTN-LKNTLKNLNVCESQSLDSGSCSALQ------------NEFVSEKLPKQRLN 140
Query: 953 TEALTIVKDFEMKRKFDLVLEELRMFHEISRENEL 987
E +VK +++ K DL L L++ +N+L
Sbjct: 141 AEKAKLVK--QVQEKEDL-LRRLKLVKMYRSKNDL 172
>gi|50593526 hypothetical protein LOC119392 isoform a [Homo sapiens]
Length = 245
Score = 33.5 bits (75), Expect = 1.2
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 20/155 (12%)
Query: 833 LKEEVKVTAESLTNSCQVHKDTKIEKEEKDSFFPMDDMFSVQSVSLISKEVNVEENKYVN 892
L+E ++ T S +S V K K+E EE D F S + L + E K+++
Sbjct: 51 LRERLRKTRFSFNSSYNVVKRLKVESEENDQTFSEKPASSTEENCLEFQ----ESFKHID 106
Query: 893 QNYVTNTNEYESILPEREIANSKDFHRKNDSALYINHQFETGLSEGNDECFQDLAAKYLS 952
+ NTN ++ L + S+ + SAL N+ + L + L+
Sbjct: 107 SEFEENTN-LKNTLKNLNVCESQSLDSGSCSALQ------------NEFVSEKLPKQRLN 153
Query: 953 TEALTIVKDFEMKRKFDLVLEELRMFHEISRENEL 987
E +VK +++ K DL L L++ +N+L
Sbjct: 154 AEKAKLVK--QVQEKEDL-LRRLKLVKMYRSKNDL 185
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 33.1 bits (74), Expect = 1.6
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 26/146 (17%)
Query: 885 VEENKYVNQNYVTNTNEYESILPEREIANSKD--FHRKNDSALYINHQFETGLSEGNDEC 942
V+EN Y + +V S + + + N D RK L N QFE + E +
Sbjct: 18 VDEN-YCKKLHVQALKNVNSQIRNQMVQNENDNRVQRKQFLRLLQNEQFELDMEEAIQKA 76
Query: 943 FQDLAAKYLSTEALTIVKDFEMKRKFDLVLEELRMFHEISRENELLSTVETNNGQENYFG 1002
++ +K+ ++K++ L +E ++ HE ++ ++ V N+ +
Sbjct: 77 EENKR-----------LKELQLKQEEKLAMELAKLKHESLKDEKMRQQVRENSIELR--- 122
Query: 1003 ENDAEKVKMEIEKDLKMVVVNKIRAS 1028
E+EK LK +NK RA+
Sbjct: 123 ---------ELEKKLKAAYMNKERAA 139
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 33.1 bits (74), Expect = 1.6
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 19/153 (12%)
Query: 520 ISGNKKDNSILTCCNILKCKKQIGIIGIQNLITRNMNTNIKNGILSIYLQDSVSEPLDIL 579
++ + KD + T + ++Q + GI+ L T+ + +N L + + S+
Sbjct: 616 VAESVKDQNQHTMNKQYEKERQRLVTGIEELRTKLIQIEAENSDLKVNMAHRTSQ----- 670
Query: 580 LKTNIAFLLNNFDSLTRIENDFELEEECIFKCMLYLKYPKNIVENHTAYLVKILTSSRLL 639
F L + L + N +LE E KC L K + E AY ++ L
Sbjct: 671 ------FQLIQEELLEKASNSSKLESEMTKKCSQLLTLEKQLEEKIVAYSSIAAKNAELE 724
Query: 640 EDNMKPMLKKRKL---FRTEQ-----VFEKSKK 664
++ M+ K R L TE FEK+KK
Sbjct: 725 QELMEKNEKIRSLETNINTEHEKICLAFEKAKK 757
>gi|47078278 choline kinase alpha isoform b [Homo sapiens]
Length = 439
Score = 32.3 bits (72), Expect = 2.7
Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 240 QPSLEIAKPSYFRDSGTISVPQFPMDLNSKMSSVYLKEIAKKKNDK-----KEAYVRDFT 294
Q LE PS D+ +S+P ++ KM++ + ++ K K E Y+++
Sbjct: 184 QGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVL 243
Query: 295 NIYWSQNRPDVKKQKLQNDKKTVEAENIFSKCYENDYPSLSSQNTCKRKDLI 346
I +++ K KL + +E EN+ S P + N C+ +++
Sbjct: 244 RIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNIL 295
>gi|47078276 choline kinase alpha isoform a [Homo sapiens]
Length = 457
Score = 32.3 bits (72), Expect = 2.7
Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 240 QPSLEIAKPSYFRDSGTISVPQFPMDLNSKMSSVYLKEIAKKKNDK-----KEAYVRDFT 294
Q LE PS D+ +S+P ++ KM++ + ++ K K E Y+++
Sbjct: 202 QGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVL 261
Query: 295 NIYWSQNRPDVKKQKLQNDKKTVEAENIFSKCYENDYPSLSSQNTCKRKDLI 346
I +++ K KL + +E EN+ S P + N C+ +++
Sbjct: 262 RIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNIL 313
>gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 601
Score = 32.3 bits (72), Expect = 2.7
Identities = 44/223 (19%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 278 IAKKKNDKKEAYVRDFTNIYWSQNRPDVKKQKLQNDKK--TVEAENIFSKCYENDYPSLS 335
+A++ K A + YW +N P V +N K ++ + C+ ND
Sbjct: 1 MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSIPEKATSGGCHPNDCSLYL 60
Query: 336 SQNTCKRKDLISSNYCNCSSIQCNVRDSRKNFAILENANWEEAECLDSYVLTRLEKSQNW 395
S ++C + + C ++ +L++ + E ++ ++ + +K Q
Sbjct: 61 SPHSCSTSSSLHAPQSPC----------QERAVVLDSRSVEISQLKNTIKSLKQQKKQ-- 108
Query: 396 DCNVRHILRRNRGNCWIINNCKTKCENMKKTEEKWNWLLLLEIDLLSKEDYHCAKVINAY 455
V H L + NN K K + + + + + L ++ + L+ + YH + + +
Sbjct: 109 ---VEHQLEEEKK----ANNKKQKAKRVLEVQIQ---TLNIQKEELNTDLYHMKRSLRYF 158
Query: 456 EEQSKLLVREILGSQTALITTVWLNGKGENDNTLQLRYNTTQK 498
EE+SK L + S L KGE ++ L T +K
Sbjct: 159 EEKSKDLAVRLQHS---------LQRKGELESVLSNVMATQKK 192
>gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein 3
isoform 2 [Homo sapiens]
Length = 602
Score = 32.3 bits (72), Expect = 2.7
Identities = 44/223 (19%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 278 IAKKKNDKKEAYVRDFTNIYWSQNRPDVKKQKLQNDKK--TVEAENIFSKCYENDYPSLS 335
+A++ K A + YW +N P V +N K ++ + C+ ND
Sbjct: 1 MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSIPEKATSGGCHPNDCSLYL 60
Query: 336 SQNTCKRKDLISSNYCNCSSIQCNVRDSRKNFAILENANWEEAECLDSYVLTRLEKSQNW 395
S ++C + + C ++ +L++ + E ++ ++ + +K Q
Sbjct: 61 SPHSCSTSSSLHAPQSPC----------QERAVVLDSRSVEISQLKNTIKSLKQQKKQ-- 108
Query: 396 DCNVRHILRRNRGNCWIINNCKTKCENMKKTEEKWNWLLLLEIDLLSKEDYHCAKVINAY 455
V H L + NN K K + + + + + L ++ + L+ + YH + + +
Sbjct: 109 ---VEHQLEEEKK----ANNKKQKAKRVLEVQIQ---TLNIQKEELNTDLYHMKRSLRYF 158
Query: 456 EEQSKLLVREILGSQTALITTVWLNGKGENDNTLQLRYNTTQK 498
EE+SK L + S L KGE ++ L T +K
Sbjct: 159 EEKSKDLAVRLQHS---------LQRKGELESVLSNVMATQKK 192
>gi|5453904 RAD51 associated protein 1 isoform b [Homo sapiens]
Length = 335
Score = 32.3 bits (72), Expect = 2.7
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 1079 TSEKDCETPLP----KRPAFLPDECKEEFNYLLRGGSHFPHGISRVRPLKTCSRPIRIGL 1134
T+ K E P K+P ++P GGS V +K+ ++ +R+GL
Sbjct: 268 TTRKPLEIRSPSAESKKPKWVPPAAS--------GGSRSSSSPLVVVSVKSPNQSLRLGL 319
Query: 1135 SRKARIKQLHP 1145
SR AR+K LHP
Sbjct: 320 SRLARVKPLHP 330
>gi|195947391 RAD51 associated protein 1 isoform a [Homo sapiens]
Length = 352
Score = 32.3 bits (72), Expect = 2.7
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 1079 TSEKDCETPLP----KRPAFLPDECKEEFNYLLRGGSHFPHGISRVRPLKTCSRPIRIGL 1134
T+ K E P K+P ++P GGS V +K+ ++ +R+GL
Sbjct: 285 TTRKPLEIRSPSAESKKPKWVPPAAS--------GGSRSSSSPLVVVSVKSPNQSLRLGL 336
Query: 1135 SRKARIKQLHP 1145
SR AR+K LHP
Sbjct: 337 SRLARVKPLHP 347
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 32.3 bits (72), Expect = 2.7
Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 25/289 (8%)
Query: 21 TPPEDPDSQPPSSKRLCLEEPGGVFKAGWRLPLVPRLSEAEKVWELSPRPFKGLLVSTNA 80
TP + +S+P + K+ P + G P P+ + E E + +G +
Sbjct: 702 TPKQKGESRPETPKQKSDGHPETPKQKGDGRPETPK-QKGESRPETPKQKNEGRPETPKH 760
Query: 81 IFDNSTDS---CVEKSVS---GKQICNLKCSNLKFQMSSCL-QSPPSQSPDSDLRASGRS 133
DN DS EK KQ LK + + L Q P +S LR +
Sbjct: 761 RHDNRRDSGKPSTEKKPEVSKHKQDTKSDSPRLKSERAEALKQRPDGRSVSESLRRDHDN 820
Query: 134 EAGLHDREAFSVHRSNSSKAGVSQLLPSTSIHDIHGIRNENRKQQFVQGRDNVHKENPFL 193
+ DR HR + S+ + L S+S ++ HGI++++ K ++ R + H+
Sbjct: 821 KQKSDDRGESERHRGDQSRVRRPETLRSSSRNE-HGIKSDSSKTDKLE-RKHRHESGDSR 878
Query: 194 DVTFYKETKSPFHEIK------NRCKANSV---VPSNKRENNISSSVLKISKSQNQPSLE 244
+ E KS + N+ +++ + P++K + + K+ ++ P +
Sbjct: 879 ERPSSGEQKSRPDSPRVKQGDSNKSRSDKLGFKSPTSKDDKRTEGNKSKVDTNKAHPDNK 938
Query: 245 IAKPSYFRD--SGTIS---VPQFPMDLNSKMSSVYLK-EIAKKKNDKKE 287
PSY SG + +P+ D + ++ K E+ + DK E
Sbjct: 939 AEFPSYLLGGRSGALKNFVIPKIKRDKDGNVTQETKKMEMKGEPKDKVE 987
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,018,161
Number of Sequences: 37866
Number of extensions: 2152755
Number of successful extensions: 7596
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 7547
Number of HSP's gapped (non-prelim): 123
length of query: 1159
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1046
effective length of database: 13,968,660
effective search space: 14611218360
effective search space used: 14611218360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.