Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MNS1 Sequence: fasta or formatted (495aa) NCBI GI: 8922950
Description:

meiosis-specific nuclear structural 1

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         35           2
 C cysteine            0.6          3           1
 D aspartate           3.8         19           2
 E glutamate          18.6         92           4
 F phenylalanine       2.2         11           1
 G glycine             1.0          5           1
 H histidine           1.2          6           1
 I isoleucine          4.4         22           2
 K lysine             13.9         69           3
 L leucine            10.9         54           2
 M methionine          4.2         21           2
 N asparagine          4.6         23           1
 P proline             0.2          1           1
 Q glutamine          10.9         54           3
 R arginine            8.3         41           2
 S serine              1.6          8           1
 T threonine           0.8          4           1
 V valine              2.6         13           1
 W tryptophan          0.4          2           1
 Y tyrosine            2.4         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   meiosis-specific nuclear structural 1 
LOC283767             0.126   golgi autoantigen, golgin subfamily a-like 
LOC727832             0.124   golgi autoantigen, golgin subfamily a-like 
LOC440243             0.115   PREDICTED: Putative golgin subfamily A member 6-lik...
TCHH                  0.113   trichohyalin 
LOC283685             0.111   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283685             0.106   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC645202             0.098   PREDICTED: hypothetical protein LOC645202 
LOC100133758          0.094   PREDICTED: hypothetical protein, partial 
CCDC19                0.094   nasopharyngeal epithelium specific protein 1 
LOC100132816          0.082   PREDICTED: similar to Putative golgin subfamily A m...
LOC400352             0.080   PREDICTED: similar to Putative golgin subfamily A m...
WDR87                 0.076   NYD-SP11 protein 
INCENP                0.076   inner centromere protein antigens 135/155kDa isofor...
CALD1                 0.075   caldesmon 1 isoform 1 
PLEC1                 0.075   plectin 1 isoform 11 
PLEC1                 0.075   plectin 1 isoform 10 
PLEC1                 0.075   plectin 1 isoform 8 
PLEC1                 0.075   plectin 1 isoform 7 
PLEC1                 0.075   plectin 1 isoform 6 
PLEC1                 0.075   plectin 1 isoform 3 
PLEC1                 0.075   plectin 1 isoform 2 
PLEC1                 0.075   plectin 1 isoform 1 
CCDC11                0.074   coiled-coil domain containing 11 
INCENP                0.074   inner centromere protein antigens 135/155kDa isofor...
MYH13                 0.072   myosin, heavy polypeptide 13, skeletal muscle [Homo...
TCHP                  0.071   trichoplein 
TCHP                  0.071   trichoplein 
GIGYF2                0.070   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.070   GRB10 interacting GYF protein 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press