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Search of human proteins with 148839342
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148839342 ATP-grasp domain containing 1 [Homo sapiens]
(827 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148839342 ATP-grasp domain containing 1 [Homo sapiens] 1662 0.0
gi|4506431 RAS p21 protein activator 1 isoform 1 [Homo sapiens] 36 0.13
gi|170295797 carbamoyl-phosphate synthetase 1 isoform c [Homo sa... 35 0.28
gi|169790915 carbamoyl-phosphate synthetase 1 isoform a precurso... 35 0.28
gi|21361331 carbamoyl-phosphate synthetase 1 isoform b precursor... 35 0.28
gi|27363458 leucine rich repeat and fibronectin type III domain ... 33 1.4
gi|110618240 CD1E antigen isoform a precursor [Homo sapiens] 32 2.4
gi|110618234 CD1E antigen isoform d precursor [Homo sapiens] 32 2.4
gi|110618232 CD1E antigen isoform c precursor [Homo sapiens] 32 2.4
gi|110618230 CD1E antigen isoform b precursor [Homo sapiens] 32 2.4
gi|239754293 PREDICTED: hypothetical protein [Homo sapiens] 32 3.1
gi|239748830 PREDICTED: hypothetical protein XP_002346814 [Homo ... 32 3.1
gi|239742861 PREDICTED: hypothetical protein XP_002342683 [Homo ... 32 3.1
gi|239740877 PREDICTED: hypothetical protein XP_002344062 [Homo ... 32 3.1
gi|239740811 PREDICTED: hypothetical protein [Homo sapiens] 32 3.1
gi|239740707 PREDICTED: hypothetical protein [Homo sapiens] 32 3.1
gi|239513969 PREDICTED: hypothetical protein [Homo sapiens] 32 3.1
gi|126352608 elastin isoform e precursor [Homo sapiens] 31 4.1
gi|126352446 elastin isoform d precursor [Homo sapiens] 31 4.1
gi|126352322 elastin isoform c precursor [Homo sapiens] 31 4.1
gi|126352700 elastin isoform b precursor [Homo sapiens] 31 4.1
gi|126352440 elastin isoform a precursor [Homo sapiens] 31 4.1
gi|98986457 host cell factor 1 [Homo sapiens] 31 4.1
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 31 4.1
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 31 4.1
gi|166999783 FBJ murine osteosarcoma viral oncogene homolog B is... 31 5.4
gi|239755909 PREDICTED: hypothetical protein [Homo sapiens] 31 5.4
gi|239750423 PREDICTED: hypothetical protein XP_002347390 [Homo ... 31 5.4
gi|45439352 suppressor of cytokine signaling 3 [Homo sapiens] 31 5.4
gi|4502649 CD1D antigen precursor [Homo sapiens] 31 5.4
>gi|148839342 ATP-grasp domain containing 1 [Homo sapiens]
Length = 827
Score = 1662 bits (4305), Expect = 0.0
Identities = 827/827 (100%), Positives = 827/827 (100%)
Query: 1 MLLCLSPAWLMKVPAPGQPGEAALLVSKAVSFHPGGLTFLDDFVPPRRATYFLAGLGLGP 60
MLLCLSPAWLMKVPAPGQPGEAALLVSKAVSFHPGGLTFLDDFVPPRRATYFLAGLGLGP
Sbjct: 1 MLLCLSPAWLMKVPAPGQPGEAALLVSKAVSFHPGGLTFLDDFVPPRRATYFLAGLGLGP 60
Query: 61 GRGREAAELARDLTCPTGASAELARLLEDRLLTRQLLAQQGGVAVPATLAFTYKPPGLLR 120
GRGREAAELARDLTCPTGASAELARLLEDRLLTRQLLAQQGGVAVPATLAFTYKPPGLLR
Sbjct: 61 GRGREAAELARDLTCPTGASAELARLLEDRLLTRQLLAQQGGVAVPATLAFTYKPPGLLR 120
Query: 121 GGDASLGLRLVELSGKEGQETLVKEEVEAFLRSEALGDILQVAVKLSGWRWRGRQAWRLH 180
GGDASLGLRLVELSGKEGQETLVKEEVEAFLRSEALGDILQVAVKLSGWRWRGRQAWRLH
Sbjct: 121 GGDASLGLRLVELSGKEGQETLVKEEVEAFLRSEALGDILQVAVKLSGWRWRGRQAWRLH 180
Query: 181 PRAELGAVVDTVLALLEKLEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAVVCRTQ 240
PRAELGAVVDTVLALLEKLEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAVVCRTQ
Sbjct: 181 PRAELGAVVDTVLALLEKLEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAVVCRTQ 240
Query: 241 GDRPLLSKVVCGVGRGDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAAL 300
GDRPLLSKVVCGVGRGDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAAL
Sbjct: 241 GDRPLLSKVVCGVGRGDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAAL 300
Query: 301 AAVLALEAGLSAEQRGGRRAHTDFLGVDFALTAAGGVLTPVALELNGGLCLEACGALEGL 360
AAVLALEAGLSAEQRGGRRAHTDFLGVDFALTAAGGVLTPVALELNGGLCLEACGALEGL
Sbjct: 301 AAVLALEAGLSAEQRGGRRAHTDFLGVDFALTAAGGVLTPVALELNGGLCLEACGALEGL 360
Query: 361 WAAPRLGPAADEAVAAPLVETMLRRSARCLMEGKQLLVVGAGGVSKKFVWEAARDYGLQL 420
WAAPRLGPAADEAVAAPLVETMLRRSARCLMEGKQLLVVGAGGVSKKFVWEAARDYGLQL
Sbjct: 361 WAAPRLGPAADEAVAAPLVETMLRRSARCLMEGKQLLVVGAGGVSKKFVWEAARDYGLQL 420
Query: 421 HLVESDPNHFASQLVQTFIHFDMTEHRRDEENARLLAELVRARGLKLDGCFSYWDDCLVL 480
HLVESDPNHFASQLVQTFIHFDMTEHRRDEENARLLAELVRARGLKLDGCFSYWDDCLVL
Sbjct: 421 HLVESDPNHFASQLVQTFIHFDMTEHRRDEENARLLAELVRARGLKLDGCFSYWDDCLVL 480
Query: 481 TALLCQELGLPCSSPAAMRLAKQKSLTQLHLLHHHGPPWPAPSLHAVPCCPLESEADVER 540
TALLCQELGLPCSSPAAMRLAKQKSLTQLHLLHHHGPPWPAPSLHAVPCCPLESEADVER
Sbjct: 481 TALLCQELGLPCSSPAAMRLAKQKSLTQLHLLHHHGPPWPAPSLHAVPCCPLESEADVER 540
Query: 541 AVHQVPLPGVMKLEFGAGAVGVRLVEDAPQCHEHFSRITRDLQGEADHPGIGLGWGNAML 600
AVHQVPLPGVMKLEFGAGAVGVRLVEDAPQCHEHFSRITRDLQGEADHPGIGLGWGNAML
Sbjct: 541 AVHQVPLPGVMKLEFGAGAVGVRLVEDAPQCHEHFSRITRDLQGEADHPGIGLGWGNAML 600
Query: 601 LMEFVEGTEHDVDLVLFGGRLLAAFVSDNGPTRLPGFTETAACMPTGLAPEQEAQMVQAA 660
LMEFVEGTEHDVDLVLFGGRLLAAFVSDNGPTRLPGFTETAACMPTGLAPEQEAQMVQAA
Sbjct: 601 LMEFVEGTEHDVDLVLFGGRLLAAFVSDNGPTRLPGFTETAACMPTGLAPEQEAQMVQAA 660
Query: 661 FRCCLGCGLLDGVFNVELKLTGAGPRLIEINPRMGGFYLRDWILELYGVDLLLAAVMVAC 720
FRCCLGCGLLDGVFNVELKLTGAGPRLIEINPRMGGFYLRDWILELYGVDLLLAAVMVAC
Sbjct: 661 FRCCLGCGLLDGVFNVELKLTGAGPRLIEINPRMGGFYLRDWILELYGVDLLLAAVMVAC 720
Query: 721 GLRPALPTRPRARGHLVGVMCLVSQHLQALSSTASRETLQALHDRGLLRLNLLEEALVPG 780
GLRPALPTRPRARGHLVGVMCLVSQHLQALSSTASRETLQALHDRGLLRLNLLEEALVPG
Sbjct: 721 GLRPALPTRPRARGHLVGVMCLVSQHLQALSSTASRETLQALHDRGLLRLNLLEEALVPG 780
Query: 781 EYEEPYCSVACAGPSPTEARLRLLGLCQGLGIDGPSYPVAHFLSHFK 827
EYEEPYCSVACAGPSPTEARLRLLGLCQGLGIDGPSYPVAHFLSHFK
Sbjct: 781 EYEEPYCSVACAGPSPTEARLRLLGLCQGLGIDGPSYPVAHFLSHFK 827
>gi|4506431 RAS p21 protein activator 1 isoform 1 [Homo sapiens]
Length = 1047
Score = 36.2 bits (82), Expect = 0.13
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 280 GEEAQVAAVRQRVKAAAEAALAAVLAL-EAGLSAEQRGGRRAHTDFLGVDFALTAAGGVL 338
G A A R ++ AA A A L E G++ GG ++FLG A GG
Sbjct: 26 GSSAYPAVCRVKIPAALPVAAAPYPGLVETGVAGTLGGGAALGSEFLGAGSVAGALGG-- 83
Query: 339 TPVALELNGGLCLEACGALEGLWAAPRLGPAADEAV 374
A GG GA G+ A GP+ D A+
Sbjct: 84 ---AGLTGGGTAAGVAGAAAGVAGAAVAGPSGDMAL 116
>gi|170295797 carbamoyl-phosphate synthetase 1 isoform c [Homo
sapiens]
Length = 1049
Score = 35.0 bits (79), Expect = 0.28
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 599 MLLMEFVEGT-EHDVDLVLFGGRLLAAFVSDNGPTRLPGFTETAACMPTGLAPEQEAQMV 657
++L +FVEG E ++D V GR+++ +S++ + +PT + + V
Sbjct: 713 VVLTKFVEGAREVEMDAVGKDGRVISHAISEHVEDAGVHSGDATLMLPTQTISQGAIEKV 772
Query: 658 QAAFRCCLGCGLLDGVFNVELKLTGAGPRLIEINPRMGGFYLRDWILELYGVDLLLAAVM 717
+ A R + G FNV+ + G +IE N R + ++ + GVD + A
Sbjct: 773 KDATRKIAKAFAISGPFNVQFLVKGNDVLVIECNLRASRSF--PFVSKTLGVDFIDVATK 830
Query: 718 VACG 721
V G
Sbjct: 831 VMIG 834
>gi|169790915 carbamoyl-phosphate synthetase 1 isoform a precursor
[Homo sapiens]
Length = 1506
Score = 35.0 bits (79), Expect = 0.28
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 599 MLLMEFVEGT-EHDVDLVLFGGRLLAAFVSDNGPTRLPGFTETAACMPTGLAPEQEAQMV 657
++L +FVEG E ++D V GR+++ +S++ + +PT + + V
Sbjct: 1170 VVLTKFVEGAREVEMDAVGKDGRVISHAISEHVEDAGVHSGDATLMLPTQTISQGAIEKV 1229
Query: 658 QAAFRCCLGCGLLDGVFNVELKLTGAGPRLIEINPRMGGFYLRDWILELYGVDLLLAAVM 717
+ A R + G FNV+ + G +IE N R + ++ + GVD + A
Sbjct: 1230 KDATRKIAKAFAISGPFNVQFLVKGNDVLVIECNLRASRSF--PFVSKTLGVDFIDVATK 1287
Query: 718 VACG 721
V G
Sbjct: 1288 VMIG 1291
>gi|21361331 carbamoyl-phosphate synthetase 1 isoform b precursor
[Homo sapiens]
Length = 1500
Score = 35.0 bits (79), Expect = 0.28
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 599 MLLMEFVEGT-EHDVDLVLFGGRLLAAFVSDNGPTRLPGFTETAACMPTGLAPEQEAQMV 657
++L +FVEG E ++D V GR+++ +S++ + +PT + + V
Sbjct: 1164 VVLTKFVEGAREVEMDAVGKDGRVISHAISEHVEDAGVHSGDATLMLPTQTISQGAIEKV 1223
Query: 658 QAAFRCCLGCGLLDGVFNVELKLTGAGPRLIEINPRMGGFYLRDWILELYGVDLLLAAVM 717
+ A R + G FNV+ + G +IE N R + ++ + GVD + A
Sbjct: 1224 KDATRKIAKAFAISGPFNVQFLVKGNDVLVIECNLRASRSF--PFVSKTLGVDFIDVATK 1281
Query: 718 VACG 721
V G
Sbjct: 1282 VMIG 1285
>gi|27363458 leucine rich repeat and fibronectin type III domain
containing 4 [Homo sapiens]
Length = 635
Score = 32.7 bits (73), Expect = 1.4
Identities = 39/136 (28%), Positives = 51/136 (37%), Gaps = 10/136 (7%)
Query: 7 PAWLMKVPAPGQPGEAALLVSKAVSFHPGGLTFLDDFVPPRRATYFLAGLGLGPGRGREA 66
P W+ ++ E + S H L VP A Y L L L P G
Sbjct: 431 PVWMFQIQYNSSEDETLIYRIVPASSHH---FLLKHLVPG--ADYDLCLLALSPAAGPSD 485
Query: 67 AELARDLTCP---TGASAELARLLEDRLLTRQLLAQQGGVAVPATLAFTYKPPGLLRGGD 123
R L C T ++ L L+ +L L GGV V A L FT L+RG
Sbjct: 486 LTATRLLGCAHFSTLPASPLCHALQAHVLGGTLTVAVGGVLVAALLVFTVAL--LVRGRG 543
Query: 124 ASLGLRLVELSGKEGQ 139
A G ++LS + Q
Sbjct: 544 AGNGRLPLKLSHVQSQ 559
>gi|110618240 CD1E antigen isoform a precursor [Homo sapiens]
Length = 388
Score = 32.0 bits (71), Expect = 2.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 199 LEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAV 235
+E ES L V P A L C GPSPGPG +C V
Sbjct: 198 MEAGESELKRKVKPEAWLSC--GPSPGPGRLQLVCHV 232
>gi|110618234 CD1E antigen isoform d precursor [Homo sapiens]
Length = 321
Score = 32.0 bits (71), Expect = 2.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 199 LEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAV 235
+E ES L V P A L C GPSPGPG +C V
Sbjct: 198 MEAGESELKRKVKPEAWLSC--GPSPGPGRLQLVCHV 232
>gi|110618232 CD1E antigen isoform c precursor [Homo sapiens]
Length = 290
Score = 32.0 bits (71), Expect = 2.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 199 LEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAV 235
+E ES L V P A L C GPSPGPG +C V
Sbjct: 198 MEAGESELKRKVKPEAWLSC--GPSPGPGRLQLVCHV 232
>gi|110618230 CD1E antigen isoform b precursor [Homo sapiens]
Length = 376
Score = 32.0 bits (71), Expect = 2.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 199 LEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAV 235
+E ES L V P A L C GPSPGPG +C V
Sbjct: 198 MEAGESELKRKVKPEAWLSC--GPSPGPGRLQLVCHV 232
>gi|239754293 PREDICTED: hypothetical protein [Homo sapiens]
Length = 110
Score = 31.6 bits (70), Expect = 3.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 256 GDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQR 315
G RPL H R + ++QCG G A R+KAA A + E L E R
Sbjct: 18 GVRPLAHFAEAGRGTKRLISQCGAG-----APRGYRLKAAWRAPAGLTVYTEIELRVEVR 72
Query: 316 GGRR 319
GRR
Sbjct: 73 PGRR 76
>gi|239748830 PREDICTED: hypothetical protein XP_002346814 [Homo
sapiens]
Length = 110
Score = 31.6 bits (70), Expect = 3.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 256 GDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQR 315
G RPL H R + ++QCG G A R+KAA A + E L E R
Sbjct: 18 GVRPLAHFAEAGRGTKRLISQCGAG-----APRGYRLKAAWRAPAGLTVYTEIELRVEVR 72
Query: 316 GGRR 319
GRR
Sbjct: 73 PGRR 76
>gi|239742861 PREDICTED: hypothetical protein XP_002342683 [Homo
sapiens]
Length = 110
Score = 31.6 bits (70), Expect = 3.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 256 GDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQR 315
G RPL H R + ++QCG G A R+KAA A + E L E R
Sbjct: 18 GVRPLAHFAEAGRGTKRLISQCGAG-----APRGYRLKAAWRAPAGLTVYTEIELRVEVR 72
Query: 316 GGRR 319
GRR
Sbjct: 73 PGRR 76
>gi|239740877 PREDICTED: hypothetical protein XP_002344062 [Homo
sapiens]
Length = 110
Score = 31.6 bits (70), Expect = 3.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 256 GDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQR 315
G RPL H R + ++QCG G A R+KAA A + E L E R
Sbjct: 18 GVRPLAHFAEAGRGTKRLISQCGAG-----APRGYRLKAAWRAPAGLTVYTEIELRVEVR 72
Query: 316 GGRR 319
GRR
Sbjct: 73 PGRR 76
>gi|239740811 PREDICTED: hypothetical protein [Homo sapiens]
Length = 110
Score = 31.6 bits (70), Expect = 3.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 256 GDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQR 315
G RPL H R + ++QCG G A R+KAA A + E L E R
Sbjct: 18 GVRPLAHFAEAGRGTKRLISQCGAG-----APRGYRLKAAWRAPAGLTVYTEIELRVEVR 72
Query: 316 GGRR 319
GRR
Sbjct: 73 PGRR 76
>gi|239740707 PREDICTED: hypothetical protein [Homo sapiens]
Length = 110
Score = 31.6 bits (70), Expect = 3.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 256 GDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQR 315
G RPL H R + ++QCG G A R+KAA A + E L E R
Sbjct: 18 GVRPLAHFAEAGRGTKRLISQCGAG-----APRGYRLKAAWRAPAGLTVYTEIELRVEVR 72
Query: 316 GGRR 319
GRR
Sbjct: 73 PGRR 76
>gi|239513969 PREDICTED: hypothetical protein [Homo sapiens]
Length = 110
Score = 31.6 bits (70), Expect = 3.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 256 GDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQR 315
G RPL H R + ++QCG G A R+KAA A + E L E R
Sbjct: 18 GVRPLAHFAEAGRGTKRLISQCGAG-----APRGYRLKAAWRAPAGLTVYTEIELRVEVR 72
Query: 316 GGRR 319
GRR
Sbjct: 73 PGRR 76
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 31.2 bits (69), Expect = 4.1
Identities = 36/133 (27%), Positives = 48/133 (36%), Gaps = 9/133 (6%)
Query: 278 GLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQRG------GRRAHTDFLGVDFAL 331
G+G AA + K AA+A L A L AG+ G G A LGV +
Sbjct: 499 GIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGV 558
Query: 332 TAAGGVLTPVALELNGGLCLEACGALEGLWAAPRLGPAADEAVAAPLVETMLRRSARCLM 391
G V +A G L GL A +G A P +A+
Sbjct: 559 PGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAA---AAAKAAA 615
Query: 392 EGKQLLVVGAGGV 404
+ Q +VGA G+
Sbjct: 616 KAAQFGLVGAAGL 628
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 31.2 bits (69), Expect = 4.1
Identities = 36/133 (27%), Positives = 48/133 (36%), Gaps = 9/133 (6%)
Query: 278 GLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQRG------GRRAHTDFLGVDFAL 331
G+G AA + K AA+A L A L AG+ G G A LGV +
Sbjct: 523 GIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGV 582
Query: 332 TAAGGVLTPVALELNGGLCLEACGALEGLWAAPRLGPAADEAVAAPLVETMLRRSARCLM 391
G V +A G L GL A +G A P +A+
Sbjct: 583 PGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAA---AAAKAAA 639
Query: 392 EGKQLLVVGAGGV 404
+ Q +VGA G+
Sbjct: 640 KAAQFGLVGAAGL 652
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 31.2 bits (69), Expect = 4.1
Identities = 36/133 (27%), Positives = 48/133 (36%), Gaps = 9/133 (6%)
Query: 278 GLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQRG------GRRAHTDFLGVDFAL 331
G+G AA + K AA+A L A L AG+ G G A LGV +
Sbjct: 504 GIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGV 563
Query: 332 TAAGGVLTPVALELNGGLCLEACGALEGLWAAPRLGPAADEAVAAPLVETMLRRSARCLM 391
G V +A G L GL A +G A P +A+
Sbjct: 564 PGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAA---AAAKAAA 620
Query: 392 EGKQLLVVGAGGV 404
+ Q +VGA G+
Sbjct: 621 KAAQFGLVGAAGL 633
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 31.2 bits (69), Expect = 4.1
Identities = 36/133 (27%), Positives = 48/133 (36%), Gaps = 9/133 (6%)
Query: 278 GLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQRG------GRRAHTDFLGVDFAL 331
G+G AA + K AA+A L A L AG+ G G A LGV +
Sbjct: 489 GIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGV 548
Query: 332 TAAGGVLTPVALELNGGLCLEACGALEGLWAAPRLGPAADEAVAAPLVETMLRRSARCLM 391
G V +A G L GL A +G A P +A+
Sbjct: 549 PGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAA---AAAKAAA 605
Query: 392 EGKQLLVVGAGGV 404
+ Q +VGA G+
Sbjct: 606 KAAQFGLVGAAGL 618
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 31.2 bits (69), Expect = 4.1
Identities = 36/133 (27%), Positives = 48/133 (36%), Gaps = 9/133 (6%)
Query: 278 GLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQRG------GRRAHTDFLGVDFAL 331
G+G AA + K AA+A L A L AG+ G G A LGV +
Sbjct: 518 GIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGV 577
Query: 332 TAAGGVLTPVALELNGGLCLEACGALEGLWAAPRLGPAADEAVAAPLVETMLRRSARCLM 391
G V +A G L GL A +G A P +A+
Sbjct: 578 PGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAA---AAAKAAA 634
Query: 392 EGKQLLVVGAGGV 404
+ Q +VGA G+
Sbjct: 635 KAAQFGLVGAAGL 647
>gi|98986457 host cell factor 1 [Homo sapiens]
Length = 2035
Score = 31.2 bits (69), Expect = 4.1
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 18/101 (17%)
Query: 217 PCSDGPSPGPGLAVRICAVVCRTQGDR--------PLLSKV-VCGVGRGDRPLRHHNSLP 267
PCS GP GP +A R G R PL SKV + D P H+
Sbjct: 1186 PCSAGPLLGPSMA--------REPGGRSPAFVQLAPLSSKVRLSSPSIKDLPAGRHSHAV 1237
Query: 268 RTLEVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEA 308
T + + G G E ++A V + ++ + + V ALEA
Sbjct: 1238 STAAMTRSSVGAG-EPRMAPVCESLQGGSPSTTVTVTALEA 1277
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 31.2 bits (69), Expect = 4.1
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 252 GVGRGDRPLR---HHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEA 308
GV GDRPL+ +N++ + E+ E + VR+ A++ ++A + E+
Sbjct: 243 GVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVRE-----AQSFISAAIEPES 297
Query: 309 GLSAEQRGGR-RAHT 322
G S E++GGR R+HT
Sbjct: 298 GKSNERKGGRSRSHT 312
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 31.2 bits (69), Expect = 4.1
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 252 GVGRGDRPLR---HHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEA 308
GV GDRPL+ +N++ + E+ E + VR+ A++ ++A + E+
Sbjct: 127 GVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVRE-----AQSFISAAIEPES 181
Query: 309 GLSAEQRGGR-RAHT 322
G S E++GGR R+HT
Sbjct: 182 GKSNERKGGRSRSHT 196
>gi|166999783 FBJ murine osteosarcoma viral oncogene homolog B
isoform 2 [Homo sapiens]
Length = 302
Score = 30.8 bits (68), Expect = 5.4
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 172 RGRQAWRLHPRAELGAVVDTVLALLEKLEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVR 231
R R+ E A +++ +A L+K +E ++ A P ++P +GP PGP VR
Sbjct: 144 RPREETETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVR 203
>gi|239755909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 30.8 bits (68), Expect = 5.4
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 692 PRMGGFYLRDWILELYGVDLLLAAVMVACGLRPALPTRPRARGHLVGVMCLVSQHLQALS 751
PR G YL W+ EL + A A PALP P G LVG + LQ L
Sbjct: 17 PRAGLTYL-GWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLG 75
Query: 752 STASR 756
S A R
Sbjct: 76 SPAER 80
>gi|239750423 PREDICTED: hypothetical protein XP_002347390 [Homo
sapiens]
Length = 212
Score = 30.8 bits (68), Expect = 5.4
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 692 PRMGGFYLRDWILELYGVDLLLAAVMVACGLRPALPTRPRARGHLVGVMCLVSQHLQALS 751
PR G YL W+ EL + A A PALP P G LVG + LQ L
Sbjct: 17 PRAGLTYL-GWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLG 75
Query: 752 STASR 756
S A R
Sbjct: 76 SPAER 80
>gi|45439352 suppressor of cytokine signaling 3 [Homo sapiens]
Length = 225
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 509 LHLLHHHGPPWPAPSLHAVPCCPLESEADVERAVHQVPLPG 549
L L+HH+ PP APS P P E ++V PLPG
Sbjct: 121 LKLVHHYMPPPGAPSF---PSPPTEPSSEVPEQPSAQPLPG 158
>gi|4502649 CD1D antigen precursor [Homo sapiens]
Length = 335
Score = 30.8 bits (68), Expect = 5.4
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 199 LEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAV 235
LE +S L + V P A L S GPSPGPG + +C V
Sbjct: 192 LESGKSELKKQVKPKAWL--SRGPSPGPGRLLLVCHV 226
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,718,486
Number of Sequences: 37866
Number of extensions: 1702275
Number of successful extensions: 4665
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 4645
Number of HSP's gapped (non-prelim): 46
length of query: 827
length of database: 18,247,518
effective HSP length: 111
effective length of query: 716
effective length of database: 14,044,392
effective search space: 10055784672
effective search space used: 10055784672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.