TNRC6B 4457

Name: TNRC6B	Sequence: fasta or formatted (1723aa)		NCBI GI: 148491080
Description: trinucleotide repeat containing 6B isoform 2		Referenced in: Additional Structural Proteins
Other entries for this name: alt prot [1833aa] trinucleotide repeat containing 6B isoform 1 alt prot [1029aa] trinucleotide repeat containing 6B isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 99 3 C cysteine 0.8 13 1 D aspartate 4.8 82 2 E glutamate 4.3 74 4 F phenylalanine 1.5 26 1 G glycine 11.8 203 3 H histidine 1.6 27 1 I isoleucine 1.9 33 2 K lysine 5.4 93 4 L leucine 5.4 93 3 M methionine 2.0 35 2 N asparagine 7.5 130 3 P proline 9.5 163 6 Q glutamine 7.0 121 8 R arginine 3.3 57 2 S serine 13.5 232 4 T threonine 6.2 106 2 V valine 3.6 62 2 W tryptophan 3.4 58 1 Y tyrosine 0.9 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 trinucleotide repeat containing 6B isoform 2 TNRC6B 0.975 trinucleotide repeat containing 6B isoform 1 TNRC6B 0.456 trinucleotide repeat containing 6B isoform 3 TNRC6A 0.249 trinucleotide repeat containing 6A TNRC6C 0.207 trinucleotide repeat containing 6C isoform 1 TNRC6C 0.195 trinucleotide repeat containing 6C isoform 2 DSPP 0.023 dentin sialophosphoprotein preproprotein HRNR 0.017 hornerin LOC100292655 0.016 PREDICTED: similar to armadillo repeat containing, ... FLG2 0.014 filaggrin family member 2 FLG 0.014 filaggrin MUC21 0.011 mucin 21 FOXP2 0.011 forkhead box P2 isoform I FOXP2 0.011 forkhead box P2 isoform II MED15 0.011 mediator complex subunit 15 isoform a MED15 0.011 mediator complex subunit 15 isoform b FOXP2 0.011 forkhead box P2 isoform III FGA 0.011 fibrinogen, alpha polypeptide isoform alpha prepropr... FGA 0.011 fibrinogen, alpha polypeptide isoform alpha-E preprop... LOC100133915 0.010 PREDICTED: hypothetical protein MLL2 0.009 myeloid/lymphoid or mixed-lineage leukemia 2 HNRNPUL1 0.009 heterogeneous nuclear ribonucleoprotein U-like 1 iso... HNRNPUL1 0.009 heterogeneous nuclear ribonucleoprotein U-like 1 iso... IRS4 0.009 insulin receptor substrate 4 RBMXL3 0.009 RNA binding motif protein, X-linked-like 3 PAXIP1 0.008 PAX interacting protein 1 ARID1A 0.008 AT rich interactive domain 1A isoform a ARID1A 0.008 AT rich interactive domain 1A isoform b TOX3 0.008 TOX high mobility group box family member 3 isoform... TOX3 0.008 TOX high mobility group box family member 3 isoform... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.