Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 145553959
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145553959 elaC homolog 2 [Homo sapiens]
(826 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145553959 elaC homolog 2 [Homo sapiens] 1670 0.0
gi|8922122 elaC homolog 1 [Homo sapiens] 60 1e-08
gi|4507753 tyrosinase precursor [Homo sapiens] 35 0.37
gi|193794853 premature ovarian failure, 1B [Homo sapiens] 34 0.63
gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens] 33 0.83
gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens] 33 0.83
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 33 1.4
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 33 1.4
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 33 1.4
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 33 1.4
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 33 1.4
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 33 1.4
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 33 1.4
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 33 1.4
gi|33300633 cleavage and polyadenylation specific factor 3-like ... 33 1.4
gi|4758316 ets variant gene 5 (ets-related molecule) [Homo sapiens] 32 1.8
gi|110349719 titin isoform N2-A [Homo sapiens] 32 2.4
gi|110349717 titin isoform novex-2 [Homo sapiens] 32 2.4
gi|110349713 titin isoform novex-1 [Homo sapiens] 32 2.4
gi|110349715 titin isoform N2-B [Homo sapiens] 32 2.4
gi|71061468 centromere protein E [Homo sapiens] 32 2.4
gi|130484567 HFM1 protein [Homo sapiens] 32 2.4
gi|114688046 TBC1 domain family, member 4 [Homo sapiens] 32 3.1
gi|14717401 protocadherin alpha subfamily C, 1 isoform 1 precurs... 31 5.4
gi|14717403 protocadherin alpha subfamily C, 1 isoform 2 precurs... 31 5.4
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 30 7.0
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 30 7.0
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 30 7.0
gi|222418631 solute carrier family 36, member 2 [Homo sapiens] 30 9.2
gi|6005920 thyrotropin-releasing hormone [Homo sapiens] 30 9.2
>gi|145553959 elaC homolog 2 [Homo sapiens]
Length = 826
Score = 1670 bits (4325), Expect = 0.0
Identities = 826/826 (100%), Positives = 826/826 (100%)
Query: 1 MWALCSLLRSAAGRTMSQGRTISQAPARRERPRKDPLRHLRTREKRGPSGCSGGPNTVYL 60
MWALCSLLRSAAGRTMSQGRTISQAPARRERPRKDPLRHLRTREKRGPSGCSGGPNTVYL
Sbjct: 1 MWALCSLLRSAAGRTMSQGRTISQAPARRERPRKDPLRHLRTREKRGPSGCSGGPNTVYL 60
Query: 61 QVVAAGSRDSGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSNVGG 120
QVVAAGSRDSGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSNVGG
Sbjct: 61 QVVAAGSRDSGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSNVGG 120
Query: 121 LSGMILTLKETGLPKCVLSGPPQLEKYLEAIKIFSGPLKGIELAVRPHSAPEYEDETMTV 180
LSGMILTLKETGLPKCVLSGPPQLEKYLEAIKIFSGPLKGIELAVRPHSAPEYEDETMTV
Sbjct: 121 LSGMILTLKETGLPKCVLSGPPQLEKYLEAIKIFSGPLKGIELAVRPHSAPEYEDETMTV 180
Query: 181 YQIPIHSEQRRGKHQPWQSPERPLSRLSPERSSDSESNENEPHLPHGVSQRRGVRDSSLV 240
YQIPIHSEQRRGKHQPWQSPERPLSRLSPERSSDSESNENEPHLPHGVSQRRGVRDSSLV
Sbjct: 181 YQIPIHSEQRRGKHQPWQSPERPLSRLSPERSSDSESNENEPHLPHGVSQRRGVRDSSLV 240
Query: 241 VAFICKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHEGREILAEELCTPP 300
VAFICKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHEGREILAEELCTPP
Sbjct: 241 VAFICKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHEGREILAEELCTPP 300
Query: 301 DPGAAFVVVECPDESFIQPICENATFQRYQGKADAPVALVVHMAPASVLVDSRYQQWMER 360
DPGAAFVVVECPDESFIQPICENATFQRYQGKADAPVALVVHMAPASVLVDSRYQQWMER
Sbjct: 301 DPGAAFVVVECPDESFIQPICENATFQRYQGKADAPVALVVHMAPASVLVDSRYQQWMER 360
Query: 361 FGPDTQHLVLNENCASVHNLRSHKIQTQLNLIHPDIFPLLTSFRCKKEGPTLSVPMVQGE 420
FGPDTQHLVLNENCASVHNLRSHKIQTQLNLIHPDIFPLLTSFRCKKEGPTLSVPMVQGE
Sbjct: 361 FGPDTQHLVLNENCASVHNLRSHKIQTQLNLIHPDIFPLLTSFRCKKEGPTLSVPMVQGE 420
Query: 421 CLLKYQLRPRREWQRDAIITCNPEEFIVEALQLPNFQQSVQEYRRSAQDGPAPAEKRSQY 480
CLLKYQLRPRREWQRDAIITCNPEEFIVEALQLPNFQQSVQEYRRSAQDGPAPAEKRSQY
Sbjct: 421 CLLKYQLRPRREWQRDAIITCNPEEFIVEALQLPNFQQSVQEYRRSAQDGPAPAEKRSQY 480
Query: 481 PEIIFLGTGSAIPMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLA 540
PEIIFLGTGSAIPMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLA
Sbjct: 481 PEIIFLGTGSAIPMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLA 540
Query: 541 AVFVSHLHADHHTGLPSILLQRERALASLGKPLHPLLVVAPNQLKAWLQQYHNQCQEVLH 600
AVFVSHLHADHHTGLPSILLQRERALASLGKPLHPLLVVAPNQLKAWLQQYHNQCQEVLH
Sbjct: 541 AVFVSHLHADHHTGLPSILLQRERALASLGKPLHPLLVVAPNQLKAWLQQYHNQCQEVLH 600
Query: 601 HISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWK 660
HISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWK
Sbjct: 601 HISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWK 660
Query: 661 VVYSGDTMPCEALVRMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAISVGMRMNAEFI 720
VVYSGDTMPCEALVRMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAISVGMRMNAEFI
Sbjct: 661 VVYSGDTMPCEALVRMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAISVGMRMNAEFI 720
Query: 721 MLNHFSQRYAKVPLFSPNFSEKVGVAFDHMKVCFGDFPTMPKLIPPLKALFAGDIEEMEE 780
MLNHFSQRYAKVPLFSPNFSEKVGVAFDHMKVCFGDFPTMPKLIPPLKALFAGDIEEMEE
Sbjct: 721 MLNHFSQRYAKVPLFSPNFSEKVGVAFDHMKVCFGDFPTMPKLIPPLKALFAGDIEEMEE 780
Query: 781 RREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ 826
RREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ
Sbjct: 781 RREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ 826
>gi|8922122 elaC homolog 1 [Homo sapiens]
Length = 363
Score = 59.7 bits (143), Expect = 1e-08
Identities = 81/327 (24%), Positives = 129/327 (39%), Gaps = 81/327 (24%)
Query: 482 EIIFLGTGSAIPMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAA 541
++ FLGTG+A P R SA ++ + L DCGEGT QL + G +
Sbjct: 4 DVTFLGTGAAYPSPTRGASAVVLRCEGEC-WLFDCGEGTQTQLMKS-----QLKAGRITK 57
Query: 542 VFVSHLHADHHTGLPSILLQRERALASLGKPLHPLLVVAPNQLKAWLQQ----------Y 591
+F++HLH DH GLP +L S+ P+ + P L+ ++ + +
Sbjct: 58 IFITHLHGDHFFGLPGLLCTISLQSGSMVSK-QPIEIYGPVGLRDFIWRTMELSHTELVF 116
Query: 592 HNQCQEVLHHISMIPAKCLQEGAEI----SSPAVERLISSLLRT-------CDLEEFQTC 640
H E++ PA+ L+E A + S P E+ + LL + D E+F
Sbjct: 117 HYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEENSYLLFDDEQFVVK 176
Query: 641 LVR--HCKHAFGCALVH--------------------------TSGWKVVY-SGDTMPCE 671
R H +FG ++V +G VV +G T+ +
Sbjct: 177 AFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQ 236
Query: 672 ALVR-----------------MGKDATLLIHEATL---EDGLEEEAVEKT----HSTTSQ 707
+++ +G L EA L E L++ ++K HST
Sbjct: 237 DVLKKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLDDAQMDKAKEHGHSTPQM 296
Query: 708 AISVGMRMNAEFIMLNHFSQRYAKVPL 734
A + A+ ++L HFSQRY V L
Sbjct: 297 AATFAKLCRAKRLVLTHFSQRYKPVAL 323
Score = 45.8 bits (107), Expect = 2e-04
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 72 AALYVFSEFNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSNVGGLSGMILTL 128
+A+ + E +LF+CGEG Q + + +LK R+ IF+T +H + GL G++ T+
Sbjct: 22 SAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTI 78
>gi|4507753 tyrosinase precursor [Homo sapiens]
Length = 529
Score = 34.7 bits (78), Expect = 0.37
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 323 NATFQRYQGKADAPVALVVHMAPASVLVDSRYQQWMERFGPDTQHLVLNENCASVHNLRS 382
N T + QG A+ P+ L+ H VDS ++QW+ R P Q + N HN S
Sbjct: 371 NGTMSQVQGSANDPIFLLHH-----AFVDSIFEQWLRRHRP-LQEVYPEANAPIGHNRES 424
Query: 383 HKI 385
+ +
Sbjct: 425 YMV 427
>gi|193794853 premature ovarian failure, 1B [Homo sapiens]
Length = 589
Score = 33.9 bits (76), Expect = 0.63
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 141 PPQLEKYLEAIKIFSGPLKGIELAVRPHSAPEYED--ETMTVYQIPIHSEQRRGKHQPWQ 198
PP+ E ++ +SGP+ + A+ P ++ E +T + YQ + S+ + H
Sbjct: 42 PPEKNVVYERVRTYSGPMNKVVQALDPFNSREVLSPLKTTSSYQNLVWSDHSQELH---- 97
Query: 199 SPERPLSRLSPERSSDSESNENEPHLP 225
SP +S +P +++ E E H P
Sbjct: 98 SPTLKISTCAPSTLHITQNTEQELHSP 124
>gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]
Length = 2817
Score = 33.5 bits (75), Expect = 0.83
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 6 SLLRSAAGRTMSQGRTISQAPARRERPRKDPLRHLRTREKRGPSGCSGGPNTVYLQVVAA 65
SL S ++++ +S P+++E+ P H T + GP G S P+T L+ A
Sbjct: 786 SLANSPGSESVTKDDALSFVPSQKEKGTATPELHTATDYRDGPDGNSNEPDTRPLEDRAV 845
Query: 66 GSRDSGAA 73
G S A
Sbjct: 846 GLSTSSTA 853
>gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens]
Length = 2813
Score = 33.5 bits (75), Expect = 0.83
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 6 SLLRSAAGRTMSQGRTISQAPARRERPRKDPLRHLRTREKRGPSGCSGGPNTVYLQVVAA 65
SL S ++++ +S P+++E+ P H T + GP G S P+T L+ A
Sbjct: 786 SLANSPGSESVTKDDALSFVPSQKEKGTATPELHTATDYRDGPDGNSNEPDTRPLEDRAV 845
Query: 66 GSRDSGAA 73
G S A
Sbjct: 846 GLSTSSTA 853
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 777 EMEERREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ 826
E R + E+R VR L + E G +GE Q RA EE +A+K +AQ
Sbjct: 1444 ERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQ 1493
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 777 EMEERREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ 826
E R + E+R VR L + E G +GE Q RA EE +A+K +AQ
Sbjct: 1448 ERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQ 1497
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 777 EMEERREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ 826
E R + E+R VR L + E G +GE Q RA EE +A+K +AQ
Sbjct: 1444 ERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQ 1493
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 777 EMEERREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ 826
E R + E+R VR L + E G +GE Q RA EE +A+K +AQ
Sbjct: 1412 ERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQ 1461
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 777 EMEERREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ 826
E R + E+R VR L + E G +GE Q RA EE +A+K +AQ
Sbjct: 1581 ERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQ 1630
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 777 EMEERREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ 826
E R + E+R VR L + E G +GE Q RA EE +A+K +AQ
Sbjct: 1422 ERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQ 1471
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 777 EMEERREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ 826
E R + E+R VR L + E G +GE Q RA EE +A+K +AQ
Sbjct: 1430 ERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQ 1479
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 777 EMEERREKRELRQVRAALLSRELAGGLEDGEPQQKRAHTEEPQAKKVRAQ 826
E R + E+R VR L + E G +GE Q RA EE +A+K +AQ
Sbjct: 1471 ERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQ 1520
>gi|33300633 cleavage and polyadenylation specific factor 3-like
[Homo sapiens]
Length = 600
Score = 32.7 bits (73), Expect = 1.4
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 46/273 (16%)
Query: 500 SATLVNISPDTSLLLDCGEGTFGQLCRHYGD-----QVDRVLGTLAAVFVSHLHADHHTG 554
S LV+I+ +++LDCG R + D Q R+ L V +SH H DH
Sbjct: 18 SCILVSIA-GKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGA 76
Query: 555 LPSILLQRERALASLGKPL---HPLLVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQ 611
LP + P+ HP + P L+ + + ++ E S + C++
Sbjct: 77 LPYF-----SEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMK 131
Query: 612 EGAEISSPAVERLISSLLRTCDLEEFQTCLVRHCKHAFGCAL--VHTSGWKVVYSGD--T 667
+ + L +T +++ + H G A+ + VVY+GD
Sbjct: 132 KVVAV----------HLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNM 181
Query: 668 MPCEALVRMGKD---ATLLIHEATLEDGL-------EEEAVEKTHSTTSQAISVGM---- 713
P L D LLI E+T + E + ++K H T + V +
Sbjct: 182 TPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFA 241
Query: 714 --RMNAEFIMLNHFSQRY-AKVPL-FSPNFSEK 742
R I+L F +R KVP+ FS +EK
Sbjct: 242 LGRAQELCILLETFWERMNLKVPIYFSTGLTEK 274
>gi|4758316 ets variant gene 5 (ets-related molecule) [Homo sapiens]
Length = 510
Score = 32.3 bits (72), Expect = 1.8
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
Query: 141 PPQLEKYLEAIKIFSGPLKGIELAVRPHSAPEYEDETMTVYQIPIHSEQRRGKHQPWQSP 200
PPQ +GP++G+ A PHS PE + T + +P R HQP Q P
Sbjct: 152 PPQATLPTSGHAPAAGPVQGVGPAPAPHSLPEPGPQQQT-FAVP------RPPHQPLQMP 204
Query: 201 ERPLSRLSPERSSDSE 216
++ PE SE
Sbjct: 205 -----KMMPENQYPSE 215
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 32.0 bits (71), Expect = 2.4
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 32/131 (24%)
Query: 195 QPWQSPERPLSRLSPERSSDSESNEN------EPHLPHGVSQR----RGVRDSSLVVAFI 244
Q ++S +S++S + SD ++ E+ EP P +S + G++D+++ +
Sbjct: 32809 QAFKSIHEKVSKISETKKSDQKTTESTVTRKTEPKAPEPISSKPVIVTGLQDTTVSSDSV 32868
Query: 245 CKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHEGREILAEELCTPPDPGA 304
K +K T P KDGK+IT G+ L+E D G
Sbjct: 32869 AKFAVK----------------ATGEPRPTAIWTKDGKAITQGGKYKLSE------DKGG 32906
Query: 305 AFVVVECPDES 315
F+ + D S
Sbjct: 32907 FFLEIHKTDTS 32917
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 32.0 bits (71), Expect = 2.4
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 32/131 (24%)
Query: 195 QPWQSPERPLSRLSPERSSDSESNEN------EPHLPHGVSQR----RGVRDSSLVVAFI 244
Q ++S +S++S + SD ++ E+ EP P +S + G++D+++ +
Sbjct: 26504 QAFKSIHEKVSKISETKKSDQKTTESTVTRKTEPKAPEPISSKPVIVTGLQDTTVSSDSV 26563
Query: 245 CKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHEGREILAEELCTPPDPGA 304
K +K T P KDGK+IT G+ L+E D G
Sbjct: 26564 AKFAVK----------------ATGEPRPTAIWTKDGKAITQGGKYKLSE------DKGG 26601
Query: 305 AFVVVECPDES 315
F+ + D S
Sbjct: 26602 FFLEIHKTDTS 26612
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 32.0 bits (71), Expect = 2.4
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 32/131 (24%)
Query: 195 QPWQSPERPLSRLSPERSSDSESNEN------EPHLPHGVSQR----RGVRDSSLVVAFI 244
Q ++S +S++S + SD ++ E+ EP P +S + G++D+++ +
Sbjct: 26437 QAFKSIHEKVSKISETKKSDQKTTESTVTRKTEPKAPEPISSKPVIVTGLQDTTVSSDSV 26496
Query: 245 CKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHEGREILAEELCTPPDPGA 304
K +K T P KDGK+IT G+ L+E D G
Sbjct: 26497 AKFAVK----------------ATGEPRPTAIWTKDGKAITQGGKYKLSE------DKGG 26534
Query: 305 AFVVVECPDES 315
F+ + D S
Sbjct: 26535 FFLEIHKTDTS 26545
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 32.0 bits (71), Expect = 2.4
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 32/131 (24%)
Query: 195 QPWQSPERPLSRLSPERSSDSESNEN------EPHLPHGVSQR----RGVRDSSLVVAFI 244
Q ++S +S++S + SD ++ E+ EP P +S + G++D+++ +
Sbjct: 26312 QAFKSIHEKVSKISETKKSDQKTTESTVTRKTEPKAPEPISSKPVIVTGLQDTTVSSDSV 26371
Query: 245 CKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHEGREILAEELCTPPDPGA 304
K +K T P KDGK+IT G+ L+E D G
Sbjct: 26372 AKFAVK----------------ATGEPRPTAIWTKDGKAITQGGKYKLSE------DKGG 26409
Query: 305 AFVVVECPDES 315
F+ + D S
Sbjct: 26410 FFLEIHKTDTS 26420
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 32.0 bits (71), Expect = 2.4
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 40 LRTREKRGPSGCSGGPNTVYLQVV-------AAGSRDSGAALYVFSEFNRYLFNCGEGVQ 92
L +REK PS C G +L +V AA + +G L NR LF G+ ++
Sbjct: 211 LESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIK 270
Query: 93 RLMQEHKLKVARLDNIFLTRMHWSNVGG 120
+L + LTR+ +++GG
Sbjct: 271 KLSDGQVGGFINYRDSKLTRILQNSLGG 298
>gi|130484567 HFM1 protein [Homo sapiens]
Length = 1435
Score = 32.0 bits (71), Expect = 2.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 340 VVHMAPASVLVDSRYQQWMERFGP 363
+V+MAP L R+ W E+FGP
Sbjct: 333 IVYMAPIKALCSQRFDDWKEKFGP 356
>gi|114688046 TBC1 domain family, member 4 [Homo sapiens]
Length = 1298
Score = 31.6 bits (70), Expect = 3.1
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 758 PTMPKLIPPLKALFAG--DIEEMEERREKRELRQVRAALLSRELAGGLEDGEPQQKRAHT 815
PTM + PL +G D E++EER++ +ELR + + +++ + E Q+ A
Sbjct: 810 PTMEE--EPLVVFLSGEDDPEKIEERKKSKELRSLWRKAIHQQILLLRMEKENQKLEASR 867
Query: 816 EEPQAKKVR 824
+E Q++KV+
Sbjct: 868 DELQSRKVK 876
>gi|14717401 protocadherin alpha subfamily C, 1 isoform 1 precursor
[Homo sapiens]
Length = 963
Score = 30.8 bits (68), Expect = 5.4
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 365 TQHLVLNENCASVHNLRSHKIQTQLNLIHPDIFPL----LTSFRCKKEGPTLSVPMVQGE 420
T LVL E+ +H +R H + T N +FP L G ++P Q +
Sbjct: 96 TYDLVL-EDPLELHKIRIHVLDTNDN---SPLFPAGDVQLHIPEFLTPGARFTLPNAQDD 151
Query: 421 C-----LLKYQLRPRREWQRDAIITCNPEEF--IVEALQLPNFQQSVQEYRRSAQDGPAP 473
+L Y L P + ++ D + E+ +V L Q++ +A+DG P
Sbjct: 152 DEGSNGILSYSLSPSQHFRLDMGSRVDGSEYPELVLEKALDREQRATHLLVLTARDGGLP 211
Query: 474 AEKRSQYPEIIFLGTGSAIPMKIRNVSATLV-NISPDTSLL-----LDCGEGTFGQL 524
A II + T P+ R+V T V +P+ ++L LD EG+ G++
Sbjct: 212 ARSGDAQVTIIVVDTNDNAPVFERSVYRTKVPETAPNGTVLFRVQALDPDEGSNGEV 268
>gi|14717403 protocadherin alpha subfamily C, 1 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 30.8 bits (68), Expect = 5.4
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 365 TQHLVLNENCASVHNLRSHKIQTQLNLIHPDIFPL----LTSFRCKKEGPTLSVPMVQGE 420
T LVL E+ +H +R H + T N +FP L G ++P Q +
Sbjct: 96 TYDLVL-EDPLELHKIRIHVLDTNDN---SPLFPAGDVQLHIPEFLTPGARFTLPNAQDD 151
Query: 421 C-----LLKYQLRPRREWQRDAIITCNPEEF--IVEALQLPNFQQSVQEYRRSAQDGPAP 473
+L Y L P + ++ D + E+ +V L Q++ +A+DG P
Sbjct: 152 DEGSNGILSYSLSPSQHFRLDMGSRVDGSEYPELVLEKALDREQRATHLLVLTARDGGLP 211
Query: 474 AEKRSQYPEIIFLGTGSAIPMKIRNVSATLV-NISPDTSLL-----LDCGEGTFGQL 524
A II + T P+ R+V T V +P+ ++L LD EG+ G++
Sbjct: 212 ARSGDAQVTIIVVDTNDNAPVFERSVYRTKVPETAPNGTVLFRVQALDPDEGSNGEV 268
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 30.4 bits (67), Expect = 7.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 9 RSAAGRTMSQGRTISQAPARRERPRKDPLRHLRTREKRGP 48
R AG S+ + P RR+RPR+ P L+ KR P
Sbjct: 362 RDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRP 401
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 30.4 bits (67), Expect = 7.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 9 RSAAGRTMSQGRTISQAPARRERPRKDPLRHLRTREKRGP 48
R AG S+ + P RR+RPR+ P L+ KR P
Sbjct: 362 RDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRP 401
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 30.4 bits (67), Expect = 7.0
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 767 LKALFAGDIEEMEERREKRELRQVRAALL--SRELAGGLEDGEPQQK 811
++ L G+++ +EE EKR+L +R +LL AGG EDGE +K
Sbjct: 776 IQLLRRGEVQWVEE--EKRDLEGIRESLLRVKEARAGGDEDGEELEK 820
>gi|222418631 solute carrier family 36, member 2 [Homo sapiens]
Length = 483
Score = 30.0 bits (66), Expect = 9.2
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 204 LSRLSPERSSDSESNENEPHLPHGVSQRRGVRDSSLVVAFICKLHLKRGNF------LVL 257
L +SP S+ N++ L S+ G++ + + F +HL +GN L L
Sbjct: 18 LDLMSPPESAKKLENKDSTFLDESPSESAGLKKTKGITVFQALIHLVKGNMGTGILGLPL 77
Query: 258 KAKEMGLPVGTAAI 271
K G+ +G ++
Sbjct: 78 AVKNAGILMGPLSL 91
>gi|6005920 thyrotropin-releasing hormone [Homo sapiens]
Length = 242
Score = 30.0 bits (66), Expect = 9.2
Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 11/69 (15%)
Query: 164 AVRPHSAPE---YEDETMTVYQIPIHSEQRRGKHQPW--------QSPERPLSRLSPERS 212
AV PH EDE + H Q G+ PW Q P R L+ +RS
Sbjct: 107 AVGPHKRQHPGRREDEASWSVDVTQHKRQHPGRRSPWLAYAVPKRQHPGRRLADPKAQRS 166
Query: 213 SDSESNENE 221
+ E E E
Sbjct: 167 WEEEEEEEE 175
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,464,737
Number of Sequences: 37866
Number of extensions: 1664701
Number of successful extensions: 4741
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4678
Number of HSP's gapped (non-prelim): 86
length of query: 826
length of database: 18,247,518
effective HSP length: 111
effective length of query: 715
effective length of database: 14,044,392
effective search space: 10041740280
effective search space used: 10041740280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.