Guide to the Human Genome
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Name: KIAA0146 Sequence: fasta or formatted (915aa) NCBI GI: 145301598
Description:

hypothetical protein LOC23514

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         60           3
 C cysteine            3.6         33           1
 D aspartate           5.1         47           2
 E glutamate           7.2         66           2
 F phenylalanine       2.3         21           2
 G glycine             6.6         60           2
 H histidine           1.7         16           1
 I isoleucine          4.4         40           2
 K lysine              5.1         47           3
 L leucine            11.0        101           4
 M methionine          1.2         11           1
 N asparagine          1.7         16           2
 P proline             6.3         58           3
 Q glutamine           4.8         44           2
 R arginine            6.4         59           2
 S serine             10.1         92           3
 T threonine           6.4         59           3
 V valine              6.6         60           3
 W tryptophan          1.2         11           1
 Y tyrosine            1.5         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23514 
LOC100289549          0.174   PREDICTED: hypothetical protein XP_002344492 
PCDH15                0.010   protocadherin 15 isoform CD2-1 precursor 
MYT1                  0.009   myelin transcription factor 1 
DSPP                  0.008   dentin sialophosphoprotein preproprotein 
TOP2A                 0.007   DNA topoisomerase II, alpha isozyme 
WDFY3                 0.007   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.007   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
DENND4A               0.006   DENN/MADD domain containing 4A isoform 2 
NAV3                  0.006   neuron navigator 3 
DMD                   0.006   dystrophin Dp427c isoform 
DMD                   0.006   dystrophin Dp116 isoform 
DMD                   0.006   dystrophin Dp260-2 isoform 
DMD                   0.006   dystrophin Dp260-1 isoform 
DMD                   0.006   dystrophin Dp427p2 isoform 
DMD                   0.006   dystrophin Dp427p1 isoform 
DMD                   0.006   dystrophin Dp140ab isoform 
DMD                   0.006   dystrophin Dp140b isoform 
DMD                   0.006   dystrophin Dp71ab isoform 
DMD                   0.006   dystrophin Dp71a isoform 
DMD                   0.006   dystrophin Dp71b isoform 
DMD                   0.006   dystrophin Dp71 isoform 
DMD                   0.006   dystrophin Dp140 isoform 
DMD                   0.006   dystrophin Dp427l isoform 
DMD                   0.006   dystrophin Dp427m isoform 
IWS1                  0.006   IWS1 homolog 
DENND4A               0.004   DENN/MADD domain containing 4A isoform 1 
HUWE1                 0.004   HECT, UBA and WWE domain containing 1 
WDR60                 0.004   WD repeat domain 60 
CHD6                  0.004   chromodomain helicase DNA binding protein 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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