Guide to the Human Genome
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Name: DIRC2 Sequence: fasta or formatted (478aa) NCBI GI: 14249552
Description:

disrupted in renal carcinoma 2

Referenced in:

Kidney
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         45           5
 C cysteine            2.5         12           1
 D aspartate           2.1         10           1
 E glutamate           2.7         13           3
 F phenylalanine       6.7         32           2
 G glycine             8.6         41           2
 H histidine           1.0          5           1
 I isoleucine          5.2         25           1
 K lysine              0.8          4           1
 L leucine            16.5         79           4
 M methionine          2.3         11           1
 N asparagine          2.1         10           1
 P proline             6.1         29           2
 Q glutamine           1.5          7           1
 R arginine            5.4         26           2
 S serine              8.4         40           2
 T threonine           5.2         25           2
 V valine              7.7         37           3
 W tryptophan          3.1         15           1
 Y tyrosine            2.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   disrupted in renal carcinoma 2 
FLVCR1                0.141   feline leukemia virus subgroup C cellular receptor 1 ...
FLVCR2                0.112   feline leukemia virus subgroup C cellular receptor ...
MFSD7                 0.106   major facilitator superfamily domain containing 7 [H...
SLC22A18              0.018   tumor suppressing subtransferable candidate 5 [Homo...
SLC22A18              0.018   tumor suppressing subtransferable candidate 5 [Homo...
ALPK3                 0.009   alpha-kinase 3 
HAS1                  0.009   hyaluronan synthase 1 
TPRX1                 0.007   tetra-peptide repeat homeobox 
LOC100130503          0.006   PREDICTED: hypothetical protein 
LOC100130503          0.006   PREDICTED: hypothetical protein 
LOC100130503          0.006   PREDICTED: hypothetical protein 
SRF                   0.006   serum response factor (c-fos serum response element-b...
CNTROB                0.006   centrobin, centrosomal BRCA2 interacting protein is...
CNTROB                0.006   centrobin, centrosomal BRCA2 interacting protein iso...
LOC100289952          0.006   PREDICTED: hypothetical protein XP_002348279 
LOC100287574          0.006   PREDICTED: hypothetical protein XP_002343901 
PPP1R3A               0.006   protein phosphatase 1, regulatory (inhibitor) subun...
GRIN2D                0.006   N-methyl-D-aspartate receptor subunit 2D precursor ...
NRG2                  0.005   neuregulin 2 isoform 2 
NRG2                  0.005   neuregulin 2 isoform 4 
NRG2                  0.005   neuregulin 2 isoform 3 
NRG2                  0.005   neuregulin 2 isoform 1 
LOC100293087          0.005   PREDICTED: hypothetical protein 
LOC729312             0.005   PREDICTED: hypothetical protein 
LOC729312             0.005   PREDICTED: hypothetical protein 
FBXL6                 0.005   F-box and leucine-rich repeat protein 6 isoform 2 [H...
FBXL6                 0.005   F-box and leucine-rich repeat protein 6 isoform 1 [H...
MFSD8                 0.005   major facilitator superfamily domain containing 8 [H...
OR6C3                 0.005   olfactory receptor, family 6, subfamily C, member 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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