Guide to the Human Genome
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Name: FLVCR1 Sequence: fasta or formatted (555aa) NCBI GI: 7661708
Description:

feline leukemia virus subgroup C cellular receptor 1

Referenced in:

Hematopoiesis and Erythrocytes
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         49           3
 C cysteine            1.4          8           1
 D aspartate           2.5         14           2
 E glutamate           4.1         23           3
 F phenylalanine       5.2         29           2
 G glycine             9.0         50           2
 H histidine           0.7          4           1
 I isoleucine          7.0         39           3
 K lysine              3.2         18           2
 L leucine            13.3         74           3
 M methionine          2.2         12           1
 N asparagine          3.4         19           1
 P proline             6.5         36           2
 Q glutamine           3.6         20           2
 R arginine            2.7         15           2
 S serine              6.7         37           2
 T threonine           7.2         40           2
 V valine              7.0         39           2
 W tryptophan          1.4          8           1
 Y tyrosine            3.8         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   feline leukemia virus subgroup C cellular receptor 1 ... 
FLVCR2                0.494   feline leukemia virus subgroup C cellular receptor ...
DIRC2                 0.122   disrupted in renal carcinoma 2 
MFSD7                 0.121   major facilitator superfamily domain containing 7 [H...
PHF15                 0.013   PHD finger protein 15 
SLC37A4               0.012   solute carrier family 37 (glucose-6-phosphate transpo...
DCAF10                0.011   WD repeat domain 32 
LOC100292723          0.010   PREDICTED: hypothetical protein 
NACA                  0.009   nascent polypeptide-associated complex alpha subuni...
ANKHD1                0.009   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.009   ANKHD1-EIF4EBP3 protein 
SLC16A10              0.008   solute carrier family 16, member 10 
SLC17A4               0.008   solute carrier family 17 (sodium phosphate), member 4...
TENC1                 0.008   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.008   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.008   tensin like C1 domain containing phosphatase isoform...
COL15A1               0.007   alpha 1 type XV collagen precursor 
SALL3                 0.007   sal-like 3 
IQSEC3                0.007   IQ motif and Sec7 domain 3 
LOC100134152          0.006   PREDICTED: similar to synaptotagmin XV-b 
FAM83A                0.006   hypothetical protein LOC84985 isoform a 
TAF4                  0.006   TBP-associated factor 4 
SLC17A5               0.006   sialin 
PAK4                  0.006   p21-activated kinase 4 isoform 2 
PAK4                  0.006   p21-activated kinase 4 isoform 2 
RERE                  0.006   atrophin-1 like protein isoform b 
RERE                  0.006   atrophin-1 like protein isoform a 
RERE                  0.006   atrophin-1 like protein isoform a 
LOC100127930          0.006   PREDICTED: hypothetical protein 
HUWE1                 0.006   HECT, UBA and WWE domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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