INA 3921

Name: INA	Sequence: fasta or formatted (499aa)		NCBI GI: 14249342
Description: internexin neuronal intermediate filament protein, alpha		Referenced in: Cytoskeleton Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.6 58 3 C cysteine 0.6 3 1 D aspartate 3.4 17 1 E glutamate 13.2 66 6 F phenylalanine 2.0 10 1 G glycine 5.2 26 2 H histidine 1.4 7 1 I isoleucine 4.0 20 2 K lysine 4.8 24 2 L leucine 12.0 60 2 M methionine 0.6 3 1 N asparagine 3.0 15 1 P proline 1.8 9 2 Q glutamine 5.4 27 2 R arginine 9.0 45 2 S serine 11.4 57 4 T threonine 4.2 21 2 V valine 3.8 19 1 W tryptophan 0.2 1 1 Y tyrosine 2.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 internexin neuronal intermediate filament protein, a... NEFM 0.420 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFL 0.407 neurofilament, light polypeptide 68kDa PRPH 0.385 peripherin VIM 0.383 vimentin DES 0.376 desmin NEFH 0.348 neurofilament, heavy polypeptide 200kDa GFAP 0.339 glial fibrillary acidic protein isoform 2 GFAP 0.339 glial fibrillary acidic protein isoform 1 KRT8 0.207 keratin 8 KRT7 0.202 keratin 7 KRT75 0.200 keratin 75 KRT5 0.198 keratin 5 KRT85 0.191 keratin 85 LOC100293351 0.189 PREDICTED: hypothetical protein isoform 2 LOC100293351 0.189 PREDICTED: hypothetical protein isoform 1 LOC100293351 0.189 PREDICTED: hypothetical protein isoform 3 KRT86 0.189 keratin 86 KRT81 0.188 keratin, hair, basic, 1 KRT83 0.188 keratin 83 KRT6A 0.188 keratin 6A KRT6C 0.188 keratin 6C KRT17 0.187 keratin 17 KRT6B 0.186 keratin 6B KRT3 0.185 keratin 3 KRT73 0.185 keratin 73 KRT84 0.185 keratin, hair, basic, 4 KRT16 0.185 keratin 16 KRT76 0.182 keratin 76 KRT13 0.182 keratin 13 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.