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Search of human proteins with 9910352
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9910352 SH3-domain GRB2-like endophilin B2 [Homo sapiens]
(395 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9910352 SH3-domain GRB2-like endophilin B2 [Homo sapiens] 780 0.0
gi|7705773 SH3-containing protein SH3GLB1 [Homo sapiens] 466 e-131
gi|4506929 SH3-domain GRB2-like 1 [Homo sapiens] 101 1e-21
gi|4506931 SH3-domain GRB2-like 2 [Homo sapiens] 97 3e-20
gi|223468657 SH3-domain GRB2-like 3 [Homo sapiens] 90 4e-18
gi|50843948 Rho GTPase activating protein 10 [Homo sapiens] 50 4e-06
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 49 1e-05
gi|197304715 vav 2 guanine nucleotide exchange factor isoform 1 ... 48 1e-05
gi|208022687 GTPase regulator associated with the focal adhesion... 48 2e-05
gi|20149528 proline-serine-threonine phosphatase interacting pro... 47 2e-05
gi|193083145 SH3 domain containing 19 isoform c [Homo sapiens] 47 4e-05
gi|193083143 SH3 domain containing 19 isoform b [Homo sapiens] 47 4e-05
gi|193083141 SH3 domain containing 19 isoform a [Homo sapiens] 47 4e-05
gi|4507249 signal transducing adaptor molecule 1 [Homo sapiens] 45 9e-05
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 45 1e-04
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H... 45 1e-04
gi|157412249 RUN and SH3 domain containing 1 isoform c [Homo sap... 42 7e-04
gi|157412247 RUN and SH3 domain containing 1 isoform b [Homo sap... 42 7e-04
gi|157412245 RUN and SH3 domain containing 1 isoform a [Homo sap... 42 7e-04
gi|42476123 RUN and SH3 domain containing 1 isoform d [Homo sapi... 42 7e-04
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 42 7e-04
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 42 0.001
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 42 0.001
gi|5453710 LIM and SH3 protein 1 [Homo sapiens] 41 0.002
gi|145309326 laminin, gamma 1 precursor [Homo sapiens] 41 0.002
gi|4758476 GRB2-related adaptor protein 2 [Homo sapiens] 41 0.002
gi|40549448 vav 2 guanine nucleotide exchange factor isoform 2 [... 41 0.002
gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo ... 41 0.002
gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo ... 41 0.002
gi|224586849 sorbin and SH3 domain containing 2 isoform 5 [Homo ... 41 0.002
>gi|9910352 SH3-domain GRB2-like endophilin B2 [Homo sapiens]
Length = 395
Score = 780 bits (2013), Expect = 0.0
Identities = 395/395 (100%), Positives = 395/395 (100%)
Query: 1 MDFNMKKLASDAGIFFTRAVQFTEEKFGQAEKTELDAHFENLLARADSTKNWTEKILRQT 60
MDFNMKKLASDAGIFFTRAVQFTEEKFGQAEKTELDAHFENLLARADSTKNWTEKILRQT
Sbjct: 1 MDFNMKKLASDAGIFFTRAVQFTEEKFGQAEKTELDAHFENLLARADSTKNWTEKILRQT 60
Query: 61 EVLLQPNPSARVEEFLYEKLDRKVPSRVTNGELLAQYMADAASELGPTTPYGKTLIKVAE 120
EVLLQPNPSARVEEFLYEKLDRKVPSRVTNGELLAQYMADAASELGPTTPYGKTLIKVAE
Sbjct: 61 EVLLQPNPSARVEEFLYEKLDRKVPSRVTNGELLAQYMADAASELGPTTPYGKTLIKVAE 120
Query: 121 AEKQLGAAERDFIHTASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAK 180
AEKQLGAAERDFIHTASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAK
Sbjct: 121 AEKQLGAAERDFIHTASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAK 180
Query: 181 AAEAKATTVPDFQETRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLE 240
AAEAKATTVPDFQETRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLE
Sbjct: 181 AAEAKATTVPDFQETRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLE 240
Query: 241 GISSTHVNHLRCLHEFVKSQTTYYAQCYRHMLDLQKQLGRFPGTFVGTTEPASPPLSSTS 300
GISSTHVNHLRCLHEFVKSQTTYYAQCYRHMLDLQKQLGRFPGTFVGTTEPASPPLSSTS
Sbjct: 241 GISSTHVNHLRCLHEFVKSQTTYYAQCYRHMLDLQKQLGRFPGTFVGTTEPASPPLSSTS 300
Query: 301 PTTAAATMPVVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLADE 360
PTTAAATMPVVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLADE
Sbjct: 301 PTTAAATMPVVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLADE 360
Query: 361 LITVYSLPGMDPDWLIGERGNKKGKVPVTYLELLS 395
LITVYSLPGMDPDWLIGERGNKKGKVPVTYLELLS
Sbjct: 361 LITVYSLPGMDPDWLIGERGNKKGKVPVTYLELLS 395
>gi|7705773 SH3-containing protein SH3GLB1 [Homo sapiens]
Length = 365
Score = 466 bits (1198), Expect = e-131
Identities = 237/396 (59%), Positives = 295/396 (74%), Gaps = 35/396 (8%)
Query: 1 MDFNMKKLASDAGIFFTRAVQFTEEKFGQAEKTELDAHFENLLARADSTKNWTEKILRQT 60
MDFN+KKLA+DAG F +RAVQFTEEK GQAEKTELDAH ENLL++A+ TK WTEKI++QT
Sbjct: 4 MDFNVKKLAADAGTFLSRAVQFTEEKLGQAEKTELDAHLENLLSKAECTKIWTEKIMKQT 63
Query: 61 EVLLQPNPSARVEEFLYEKLDRKVPSRVTNGELLAQYMADAASELGPTTPYGKTLIKVAE 120
EVLLQPNP+AR+EEF+YEKLDRK PSR+ N ELL QYM DA +E GP T YG LIK E
Sbjct: 64 EVLLQPNPNARIEEFVYEKLDRKAPSRINNPELLGQYMIDAGTEFGPGTAYGNALIKCGE 123
Query: 121 AEKQLGAAERDFIHTASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAK 180
+K++G A+R+ I T++++FLTPLRNF+EGD+KTI+KER+LLQN+RLDLDA K RLKKAK
Sbjct: 124 TQKRIGTADRELIQTSALNFLTPLRNFIEGDYKTIAKERKLLQNKRLDLDAAKTRLKKAK 183
Query: 181 AAEAKATTVPDFQETRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLE 240
AAE + + +EQELR+ Q+EFDRQAE+TRLLLE
Sbjct: 184 AAETR-----------------------------NSSEQELRITQSEFDRQAEITRLLLE 214
Query: 241 GISSTHVNHLRCLHEFVKSQTTYYAQCYRHMLDLQKQLGRFPGTFVGTTEPAS-PPLSST 299
GISSTH +HLRCL++FV++Q TYYAQCY++MLDLQKQLG FP ++ S P+ S
Sbjct: 215 GISSTHAHHLRCLNDFVEAQMTYYAQCYQYMLDLQKQLGSFPSNYLSNNNQTSVTPVPSV 274
Query: 300 SPTTAAATMPVVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLAD 359
P ++ S + P S E SG+RKARVLYDY+AA+S+EL+LLAD
Sbjct: 275 LPNAIGSSAMASTSGLVITSPSNLSDLKE-----CSGSRKARVLYDYDAANSTELSLLAD 329
Query: 360 ELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELLS 395
E+ITV+S+ GMD DWL+GERGN+KGKVP+TYLELL+
Sbjct: 330 EVITVFSVVGMDSDWLMGERGNQKGKVPITYLELLN 365
>gi|4506929 SH3-domain GRB2-like 1 [Homo sapiens]
Length = 368
Score = 101 bits (251), Expect = 1e-21
Identities = 95/400 (23%), Positives = 156/400 (39%), Gaps = 67/400 (16%)
Query: 16 FTRAVQFTEEKFGQAEKTELDAHFENLLARADSTKNWTEKILRQTEVLLQPNPSARVEEF 75
F +A Q EK G AE T+LD F+ + + D T ++L +T LQPNP++R +
Sbjct: 10 FYKASQLVSEKVGGAEGTKLDDDFKEMEKKVDVTSKAVTEVLARTIEYLQPNPASRAKLT 69
Query: 76 LYEKLDR-----KVPSRVTNGELLAQYMADAASELGPTTPYGKTLIKVAEAEKQLGAAER 130
+ + + K P + LL + M ELG + +G L+ E+ K+L +
Sbjct: 70 MLNTVSKIRGQVKNPGYPQSEGLLGECMIRHGKELGGESNFGDALLDAGESMKRLAEVKD 129
Query: 131 DFIHTASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKAAEAKATTVP 190
+F+ PL+N E D K I + L+ RRLD D K R K +P
Sbjct: 130 SLDIEVKQNFIDPLQNLCEKDLKEIQHHLKKLEGRRLDFDYKKKRQGK----------IP 179
Query: 191 DFQETRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLEGISSTHVNHL 250
D +ELR A +F+ EV + + T + +
Sbjct: 180 D---------------------------EELRQALEKFEESKEVAETSMHNLLETDIEQV 212
Query: 251 RCLHEFVKSQTTYYAQCYRHMLDLQKQLGRFPGTFVGTTEPASPPLSSTSPTT------- 303
L V +Q Y+ Q + + +L ++L R E +S P P
Sbjct: 213 SQLSALVDAQLDYHRQAVQILDELAEKLKR------RMREASSRPKREYKPKPREPFDLG 266
Query: 304 ---------AAATMPVVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSEL 354
T P + + +S + PP + LYD+E + EL
Sbjct: 267 EPEQSNGGFPCTTAPKIAASSSFRSSDKPIRTPSRSMPPLD-QPSCKALYDFEPENDGEL 325
Query: 355 ALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELL 394
++IT+ + +D +W G + G P++Y+E+L
Sbjct: 326 GFHEGDVITLTN--QIDENWYEGMLDGQSGFFPLSYVEVL 363
>gi|4506931 SH3-domain GRB2-like 2 [Homo sapiens]
Length = 352
Score = 97.1 bits (240), Expect = 3e-20
Identities = 95/388 (24%), Positives = 153/388 (39%), Gaps = 59/388 (15%)
Query: 16 FTRAVQFTEEKFGQAEKTELDAHFENLLARADSTKNWTEKILRQTEVLLQPNPSARVEEF 75
F +A Q EK G AE T+LD F+ + + D T +I+ +T LQPNP++R +
Sbjct: 10 FHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLS 69
Query: 76 LYEKLDR-----KVPSRVTNGELLAQYMADAASELGPTTPYGKTLIKVAEAEKQLGAAER 130
+ + + K P LLA+ M ELG +G L +V EA ++L +
Sbjct: 70 MINTMSKIRGQEKGPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKD 129
Query: 131 DFIHTASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKAAEAKATTVP 190
+F+ PL+N + D + I + L+ RRLD D K R K +P
Sbjct: 130 SLDIEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFDYKKKRQGK----------IP 179
Query: 191 DFQETRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLEGISSTHVNHL 250
D +ELR A +FD E+ + + + +
Sbjct: 180 D---------------------------EELRQALEKFDESKEIAESSMFNLLEMDIEQV 212
Query: 251 RCLHEFVKSQTTYYAQCYRHMLDLQKQLGRFPGTFVGTTEPASPPLSSTSPTTAAATMPV 310
L V++Q Y+ Q + + + +L + +S P P +
Sbjct: 213 SQLSALVQAQLEYHKQAVQILQQVTVRLEE------RIRQASSQPRREYQPKPRMSL--E 264
Query: 311 VPSVASLAPPGEASLCLEEVAPPASGTRK----ARVLYDYEAADSSELALLADELITVYS 366
P+ S P G S P SG + R LYD+E + EL ++IT+ +
Sbjct: 265 FPTGDSTQPNGGLS---HTGTPKPSGVQMDQPCCRALYDFEPENEGELGFKEGDIITLTN 321
Query: 367 LPGMDPDWLIGERGNKKGKVPVTYLELL 394
+D +W G G P+ Y+E+L
Sbjct: 322 --QIDENWYEGMLHGHSGFFPINYVEIL 347
>gi|223468657 SH3-domain GRB2-like 3 [Homo sapiens]
Length = 347
Score = 89.7 bits (221), Expect = 4e-18
Identities = 92/387 (23%), Positives = 151/387 (39%), Gaps = 62/387 (16%)
Query: 16 FTRAVQFTEEKFGQAEKTELDAHFENLLARADSTKNWTEKILRQTEVLLQPNPSARVEEF 75
F +A Q EK AE T+LD F ++ + D T +IL +T LQPNP+ R +
Sbjct: 10 FHKASQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYRAKLG 69
Query: 76 LYEKLDRKVPSRVTNGE-----LLAQYMADAASELGPTTPYGKTLIKVAEAEKQLGAAER 130
+ + + T G LL M ELG + +G LI+V E+ K + +
Sbjct: 70 MLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGNALIEVGESMKLMAEVKD 129
Query: 131 DFIHTASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKAAEAKATTVP 190
+F+ PL+ + D K I + L+ RRLD D K R+ K +P
Sbjct: 130 SLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKKRVGK----------IP 179
Query: 191 DFQETRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLEGISSTHVNHL 250
D +E+R A +F+ E+ + V +
Sbjct: 180 D---------------------------EEVRQAVEKFEESKELAERSMFNFLENDVEQV 212
Query: 251 RCLHEFVKSQTTYYAQCYRHMLDLQK--QLGRFPGTFVGTTEPASPPLS-STSPTTAAAT 307
L F+++ Y+ Q + +LQ Q+ + V E P+ S+S +T
Sbjct: 213 SQLAVFIEAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVST 272
Query: 308 MPVVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLADELITVYSL 367
VV + S P + R LYD+E + EL ++IT+ +
Sbjct: 273 TSVVKTTGSNIPMDQPC---------------CRGLYDFEPENQGELGFKEGDIITLTN- 316
Query: 368 PGMDPDWLIGERGNKKGKVPVTYLELL 394
+D +W G + G P+ Y+E++
Sbjct: 317 -QIDENWYEGMIHGESGFFPINYVEVI 342
>gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]
Length = 786
Score = 50.1 bits (118), Expect = 4e-06
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 270 HMLDLQKQLGRFPGTFVGTTEPASPP-LSSTSPTTAAATMPVVPSVASLAP-PGEASLCL 327
H+L G + T G T + L+ SPTT ++ V P +P P +
Sbjct: 661 HLLADGGSFGDWASTIPGQTRSSMVQWLNPQSPTTTSSNSAVTPLSPGSSPFPFSPPATV 720
Query: 328 EEVAPPASGTRKARVLYDYEAADSSELALLADELITVYS--LPGMDPDWLIGERGNKKGK 385
+ P + +RKAR +Y EA SSEL+ E+ ++ +P WL G K+G
Sbjct: 721 ADKPPESIRSRKARAVYPCEAEHSSELSF---EIGAIFEDVQTSREPGWLEGTLNGKRGL 777
Query: 386 VPVTYLELL 394
+P Y++LL
Sbjct: 778 IPQNYVKLL 786
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 48.5 bits (114), Expect = 1e-05
Identities = 69/341 (20%), Positives = 126/341 (36%), Gaps = 33/341 (9%)
Query: 16 FTRAVQFTEEKFGQAEKTELDAHFENLLA---RADSTKNWTEKILRQTEVLLQPNPSARV 72
F R Q + G+AEKTE+ + E+LL R + K + ++ LQ A
Sbjct: 5 FNRMRQLANQTVGRAEKTEVLS--EDLLQVEKRLELVKQVSHSTHKKLTACLQGQQGAEA 62
Query: 73 EEFLYEKLDRKVPSRVTNGELLAQYMADAASELGPTTPYGKTLIKVAEAEKQLGAAERDF 132
+ K +K+P LAQ + + ++ LG T GK L E E +L F
Sbjct: 63 D-----KRSKKLPLTT-----LAQCLMEGSAILGDDTLLGKMLKLCGETEDKLAQELIHF 112
Query: 133 IHTASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKAAEAKATTVPDF 192
+ PL E + I K+R+ L LD+D+ + R ++ + ++++
Sbjct: 113 ELQVERDVIEPLFLLAEVEIPNIQKQRKHLAKLVLDMDSSRTRWQQTSKSSGLSSSLQP- 171
Query: 193 QETRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLEGISSTHVNHLRC 252
A A AL +E+++A + + + + + + +++
Sbjct: 172 ---------AGAKADAL-REEMEEAANRVEICRDQLSAD-------MYSFVAKEIDYANY 214
Query: 253 LHEFVKSQTTYYAQCYRHMLDLQKQLGRFPGTFVGTTEPASPPLSSTSPTTAAATMPVVP 312
++ Q Y+ + + + Q+ +V P + + P+
Sbjct: 215 FQTLIEVQAEYHRKSLTLLQAVLPQIKAQQEAWVEKPSFGKPLEEHLTISGREIAFPIEA 274
Query: 313 SVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSE 353
V L G L VAP AS +K + D D E
Sbjct: 275 CVTMLLECGMQEEGLFRVAPSASKLKKLKAALDCCVVDVQE 315
>gi|197304715 vav 2 guanine nucleotide exchange factor isoform 1
[Homo sapiens]
Length = 878
Score = 48.1 bits (113), Expect = 1e-05
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 25/262 (9%)
Query: 148 LEGDWKTISKERRLLQNRRL------DLDAC----KARLKKAKAAEAKATTVPDF---QE 194
L GD ++ E RL+Q R+ + C + + + + E T P F E
Sbjct: 620 LRGDPESPWWEGRLVQTRKSGYFPSSSVKPCPVDGRPPISRPPSREIDYTAYPWFAGNME 679
Query: 195 TRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLEG--ISSTHVNHLRC 252
+ + +L + AS + AE E +F+ + + +++ + I T
Sbjct: 680 RQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDS 739
Query: 253 LHEFVKSQTTYYAQCYRHMLDLQKQLGRFPGTFVGTTEPASPPLSSTSPTTAAAT--MPV 310
L E V+ Y QC+ + + KQL + E ++ SS SP + A+ +
Sbjct: 740 LLELVE-----YYQCHS-LKESFKQLDTTLKYPYKSRERSASRASSRSPASCASYNFSFL 793
Query: 311 VPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLADELITVYSLPGM 370
P S A G ++ P GT AR Y++ A D EL+L +++ +YS G
Sbjct: 794 SPQGLSFASQGPSAPFWSVFTPRVIGTAVAR--YNFAARDMRELSLREGDVVRIYSRIGG 851
Query: 371 DPDWLIGERGNKKGKVPVTYLE 392
D W GE + G P TY+E
Sbjct: 852 DQGWWKGETNGRIGWFPSTYVE 873
>gi|208022687 GTPase regulator associated with the focal adhesion
kinase pp125 isoform b [Homo sapiens]
Length = 759
Score = 47.8 bits (112), Expect = 2e-05
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 286 VGTTEPASPPLSSTSPTTAAATMPVVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYD 345
+ +P P +P+ + P P ++ + P S + +P ++ RKA+ LY
Sbjct: 652 LAVVKPTRPNSLPPNPSPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPVSTPFRKAKALYA 711
Query: 346 YEAADSSELALLADELITVYS--LPGMDPDWLIGERGNKKGKVPVTYLELL 394
+A SEL+ A TV+ P +P WL G K G +P Y+E L
Sbjct: 712 CKAEHDSELSFTAG---TVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL 759
>gi|20149528 proline-serine-threonine phosphatase interacting
protein 1 [Homo sapiens]
Length = 416
Score = 47.4 bits (111), Expect = 2e-05
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 280 RFPGTFVGTTEPASPPLSSTSPTTAAATMPVVPSVASLAPPGEASLCLEEVAPPASGTRK 339
RF G G+ P +++ +AA+T + P+ A E PAS ++
Sbjct: 310 RFSGLLHGS------PKTTSLAASAASTETLTPTPERNEGVYTAIAVQEIQGNPASPAQE 363
Query: 340 ARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELL 394
R LYDY A + EL L A +++ V L G D W + ER ++G VP +YLE L
Sbjct: 364 YRALYDYTAQNPDELDLSAGDILEVI-LEGEDGWWTV-ERNGQRGFVPGSYLEKL 416
>gi|193083145 SH3 domain containing 19 isoform c [Homo sapiens]
Length = 731
Score = 46.6 bits (109), Expect = 4e-05
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 310 VVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLADELITVYSLPG 369
+ P+V P EA L + P RKA+ LYD+ + EL+ A ++IT L
Sbjct: 650 IFPAVFVRPCPAEAKSMLA-IVPKG---RKAKALYDFRGENEDELSFKAGDIIT--ELES 703
Query: 370 MDPDWLIGERGNKKGKVPVTYLELL 394
+D DW+ GE K G P Y++ L
Sbjct: 704 VDDDWMSGELMGKSGIFPKNYIQFL 728
>gi|193083143 SH3 domain containing 19 isoform b [Homo sapiens]
Length = 767
Score = 46.6 bits (109), Expect = 4e-05
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 310 VVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLADELITVYSLPG 369
+ P+V P EA L + P RKA+ LYD+ + EL+ A ++IT L
Sbjct: 686 IFPAVFVRPCPAEAKSMLA-IVPKG---RKAKALYDFRGENEDELSFKAGDIIT--ELES 739
Query: 370 MDPDWLIGERGNKKGKVPVTYLELL 394
+D DW+ GE K G P Y++ L
Sbjct: 740 VDDDWMSGELMGKSGIFPKNYIQFL 764
>gi|193083141 SH3 domain containing 19 isoform a [Homo sapiens]
Length = 790
Score = 46.6 bits (109), Expect = 4e-05
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 310 VVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLADELITVYSLPG 369
+ P+V P EA L + P RKA+ LYD+ + EL+ A ++IT L
Sbjct: 709 IFPAVFVRPCPAEAKSMLA-IVPKG---RKAKALYDFRGENEDELSFKAGDIIT--ELES 762
Query: 370 MDPDWLIGERGNKKGKVPVTYLELL 394
+D DW+ GE K G P Y++ L
Sbjct: 763 VDDDWMSGELMGKSGIFPKNYIQFL 787
>gi|4507249 signal transducing adaptor molecule 1 [Homo sapiens]
Length = 540
Score = 45.4 bits (106), Expect = 9e-05
Identities = 41/133 (30%), Positives = 56/133 (42%), Gaps = 16/133 (12%)
Query: 273 DLQKQLGRFP--GTFVGTTEPASPPLSSTSPTTAAATMPVVPSVA----SLAPPGEASLC 326
+L++Q FP G+ ASP L + P T A SL + S
Sbjct: 134 NLKEQGVTFPAIGSQAAEQAKASPALVAKDPGTVANKKEEEDLAKAIELSLKEQRQQSTT 193
Query: 327 LEEVAPPASGT--------RKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGE 378
L + P S RK R +YD+EAA+ +EL A E+ITV L DP+W GE
Sbjct: 194 LSTLYPSTSSLLTNHQHEGRKVRAIYDFEAAEDNELTFKAGEIITV--LDDSDPNWWKGE 251
Query: 379 RGNKKGKVPVTYL 391
G P ++
Sbjct: 252 THQGIGLFPSNFV 264
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 45.1 bits (105), Expect = 1e-04
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 11/118 (9%)
Query: 277 QLGRFPGTFVGTTEPASPPLSSTSPTTAAATMPVVPSVASLA---PPGEASLCLEEVAPP 333
QLG FP FV + P L + + + P ++SLA PP L+ V+ P
Sbjct: 128 QLGAFPSNFVELLDSGPPSLGNPDMPSVSPGPQRPPKLSSLAYDSPPDY----LQTVSHP 183
Query: 334 ASGTRKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYL 391
RVL+DY+ ELAL +++ V S D W GE ++G P ++
Sbjct: 184 ----EVYRVLFDYQPEAPDELALRRGDVVKVLSKTTEDKGWWEGECQGRRGVFPDNFV 237
Score = 31.6 bits (70), Expect = 1.3
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 326 CLEEVAPPASGTRKAR---VLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNK 382
C PA R R V + Y + EL L A E++ + + ++ W +G++ +
Sbjct: 71 CARRRGHPAKHPRPQRWCKVNFSYSPEQADELKLQAGEIVEM--IKEIEDGWWLGKKNGQ 128
Query: 383 KGKVPVTYLELL 394
G P ++ELL
Sbjct: 129 LGAFPSNFVELL 140
>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
sapiens]
Length = 645
Score = 45.1 bits (105), Expect = 1e-04
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 11/118 (9%)
Query: 277 QLGRFPGTFVGTTEPASPPLSSTSPTTAAATMPVVPSVASLA---PPGEASLCLEEVAPP 333
QLG FP FV + P L + + + P ++SLA PP L+ V+ P
Sbjct: 17 QLGAFPSNFVELLDSGPPSLGNPDMPSVSPGPQRPPKLSSLAYDSPPDY----LQTVSHP 72
Query: 334 ASGTRKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYL 391
RVL+DY+ ELAL +++ V S D W GE ++G P ++
Sbjct: 73 ----EVYRVLFDYQPEAPDELALRRGDVVKVLSKTTEDKGWWEGECQGRRGVFPDNFV 126
>gi|157412249 RUN and SH3 domain containing 1 isoform c [Homo
sapiens]
Length = 492
Score = 42.4 bits (98), Expect = 7e-04
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 278 LGRFPGTFVGTTEPASPPLSSTSPTT-AAATMPVVPSVASLAPPGEASLC-LEEVAPPAS 335
LGR G G E + L S P++ T+ V+ V APP S LE AP
Sbjct: 374 LGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAPRMV 433
Query: 336 GTRKA-RVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELL 394
T +A R L D+ AA +L+ E++ V + +D DWL R +G VPV Y L+
Sbjct: 434 QTHRAVRALCDHTAARPDQLSFRRGEVLRVITT--VDEDWLRCGRDGMEGLVPVGYTSLV 491
>gi|157412247 RUN and SH3 domain containing 1 isoform b [Homo
sapiens]
Length = 796
Score = 42.4 bits (98), Expect = 7e-04
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 278 LGRFPGTFVGTTEPASPPLSSTSPTT-AAATMPVVPSVASLAPPGEASLC-LEEVAPPAS 335
LGR G G E + L S P++ T+ V+ V APP S LE AP
Sbjct: 678 LGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAPRMV 737
Query: 336 GTRKA-RVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELL 394
T +A R L D+ AA +L+ E++ V + +D DWL R +G VPV Y L+
Sbjct: 738 QTHRAVRALCDHTAARPDQLSFRRGEVLRVITT--VDEDWLRCGRDGMEGLVPVGYTSLV 795
>gi|157412245 RUN and SH3 domain containing 1 isoform a [Homo
sapiens]
Length = 902
Score = 42.4 bits (98), Expect = 7e-04
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 278 LGRFPGTFVGTTEPASPPLSSTSPTT-AAATMPVVPSVASLAPPGEASLC-LEEVAPPAS 335
LGR G G E + L S P++ T+ V+ V APP S LE AP
Sbjct: 784 LGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAPRMV 843
Query: 336 GTRKA-RVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELL 394
T +A R L D+ AA +L+ E++ V + +D DWL R +G VPV Y L+
Sbjct: 844 QTHRAVRALCDHTAARPDQLSFRRGEVLRVITT--VDEDWLRCGRDGMEGLVPVGYTSLV 901
>gi|42476123 RUN and SH3 domain containing 1 isoform d [Homo
sapiens]
Length = 433
Score = 42.4 bits (98), Expect = 7e-04
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 278 LGRFPGTFVGTTEPASPPLSSTSPTT-AAATMPVVPSVASLAPPGEASLC-LEEVAPPAS 335
LGR G G E + L S P++ T+ V+ V APP S LE AP
Sbjct: 315 LGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAPRMV 374
Query: 336 GTRKA-RVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELL 394
T +A R L D+ AA +L+ E++ V + +D DWL R +G VPV Y L+
Sbjct: 375 QTHRAVRALCDHTAARPDQLSFRRGEVLRVITT--VDEDWLRCGRDGMEGLVPVGYTSLV 432
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 42.4 bits (98), Expect = 7e-04
Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 8/145 (5%)
Query: 43 LARADSTKNWTEKILRQTEVLLQP------NPSARVEEFLYEKLDRKVPSRVTNGELLA- 95
L R T + + L Q E L+P N R++ L + + RV L+A
Sbjct: 18 LGRTPETAEFLGEDLLQVEQRLEPAKRAAHNIHKRLQACLQGQSGADMDKRVKKLPLMAL 77
Query: 96 -QYMADAASELGPTTPYGKTLIKVAEAEKQLGAAERDFIHTASISFLTPLRNFLEGDWKT 154
MA++ EL P + GK L + QL +F T L PL E +
Sbjct: 78 STTMAESFKELDPDSSMGKALEMSCAIQNQLARILAEFEMTLERDVLQPLSRLSEEELPA 137
Query: 155 ISKERRLLQNRRLDLDACKARLKKA 179
I K ++ LQ D + K+RL +A
Sbjct: 138 ILKHKKSLQKLVSDWNTLKSRLSQA 162
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 42.0 bits (97), Expect = 0.001
Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 29/119 (24%)
Query: 275 QKQLGRFPGTFVGTTEPASPPLSSTSPTTAAATMPVVPSVASLAPPGEASLCLEEVAPPA 334
++Q+G FP +V P + ++ T P + A V +
Sbjct: 1122 KRQIGWFPANYVKLLSPGTSKITPTEPPKSTALAAVCQVIG------------------- 1162
Query: 335 SGTRKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLEL 393
+YDY A + ELA ++I V L DPDW GE + G P Y++L
Sbjct: 1163 --------MYDYTAQNDDELAFNKGQIINV--LNKEDPDWWKGEVNGQVGLFPSNYVKL 1211
Score = 38.5 bits (88), Expect = 0.011
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 16/121 (13%)
Query: 273 DLQKQLGRFPGTFVGTTEPASPPLSSTSPTTAAATMPVVPSVASLAPPGEASLCLEEVAP 332
++Q Q G FP ++V + P STS + ++ P S+ +A P A
Sbjct: 953 EVQGQKGWFPKSYVKLI--SGPIRKSTSMDSGSSESPA--SLKRVASPA---------AK 999
Query: 333 PASGTRKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLE 392
P + +Y YE+++ +L ++I V G DW G G+K G P Y+
Sbjct: 1000 PVVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDG---DWWTGTVGDKAGVFPSNYVR 1056
Query: 393 L 393
L
Sbjct: 1057 L 1057
Score = 32.0 bits (71), Expect = 1.00
Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 29/136 (21%)
Query: 286 VGTTEPASPP-----LSSTSPTTA-----AATMPVVPSVASLAPPGEASLCLEEVAPPAS 335
V ++EP++ P SST PT+ + SL P L PA+
Sbjct: 838 VTSSEPSTTPNNWADFSSTWPTSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPAT 897
Query: 336 GTR----------------KARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGER 379
T +A+ LY + A + L +++ITV M W GE
Sbjct: 898 ATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDM---WWFGEV 954
Query: 380 GNKKGKVPVTYLELLS 395
+KG P +Y++L+S
Sbjct: 955 QGQKGWFPKSYVKLIS 970
Score = 28.9 bits (63), Expect = 8.5
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 341 RVLYDYEAADSSELALLADELITVY------SLPGMDPDWLIGERGNKKGKVPVTYLE 392
R LY +E+ E+ + +++ V S G +P WL GE K G P Y E
Sbjct: 746 RALYPFESRSHDEITIQPGDIVMVKGEWVDESQTG-EPGWLGGELKGKTGWFPANYAE 802
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 42.0 bits (97), Expect = 0.001
Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 29/119 (24%)
Query: 275 QKQLGRFPGTFVGTTEPASPPLSSTSPTTAAATMPVVPSVASLAPPGEASLCLEEVAPPA 334
++Q+G FP +V P + ++ T P + A V +
Sbjct: 1122 KRQIGWFPANYVKLLSPGTSKITPTEPPKSTALAAVCQVIG------------------- 1162
Query: 335 SGTRKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLEL 393
+YDY A + ELA ++I V L DPDW GE + G P Y++L
Sbjct: 1163 --------MYDYTAQNDDELAFNKGQIINV--LNKEDPDWWKGEVNGQVGLFPSNYVKL 1211
Score = 38.5 bits (88), Expect = 0.011
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 16/121 (13%)
Query: 273 DLQKQLGRFPGTFVGTTEPASPPLSSTSPTTAAATMPVVPSVASLAPPGEASLCLEEVAP 332
++Q Q G FP ++V + P STS + ++ P S+ +A P A
Sbjct: 953 EVQGQKGWFPKSYVKLI--SGPIRKSTSMDSGSSESPA--SLKRVASPA---------AK 999
Query: 333 PASGTRKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLE 392
P + +Y YE+++ +L ++I V G DW G G+K G P Y+
Sbjct: 1000 PVVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDG---DWWTGTVGDKAGVFPSNYVR 1056
Query: 393 L 393
L
Sbjct: 1057 L 1057
Score = 32.0 bits (71), Expect = 1.00
Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 29/136 (21%)
Query: 286 VGTTEPASPP-----LSSTSPTTA-----AATMPVVPSVASLAPPGEASLCLEEVAPPAS 335
V ++EP++ P SST PT+ + SL P L PA+
Sbjct: 838 VTSSEPSTTPNNWADFSSTWPTSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPAT 897
Query: 336 GTR----------------KARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGER 379
T +A+ LY + A + L +++ITV M W GE
Sbjct: 898 ATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDM---WWFGEV 954
Query: 380 GNKKGKVPVTYLELLS 395
+KG P +Y++L+S
Sbjct: 955 QGQKGWFPKSYVKLIS 970
Score = 28.9 bits (63), Expect = 8.5
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 341 RVLYDYEAADSSELALLADELITVY------SLPGMDPDWLIGERGNKKGKVPVTYLE 392
R LY +E+ E+ + +++ V S G +P WL GE K G P Y E
Sbjct: 746 RALYPFESRSHDEITIQPGDIVMVKGEWVDESQTG-EPGWLGGELKGKTGWFPANYAE 802
>gi|5453710 LIM and SH3 protein 1 [Homo sapiens]
Length = 261
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 309 PVVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLADELITVYSLP 368
PV S P A + ++ AP G R R +YDY AAD E++ + T+ ++
Sbjct: 178 PVAQSYGGYKEPA-APVSIQRSAPGGGGKRY-RAVYDYSAADEDEVSFQDGD--TIVNVQ 233
Query: 369 GMDPDWLIG--ERGNKKGKVPVTYLELL 394
+D W+ G ER G +P Y+E +
Sbjct: 234 QIDDGWMYGTVERTGDTGMLPANYVEAI 261
>gi|145309326 laminin, gamma 1 precursor [Homo sapiens]
Length = 1609
Score = 41.2 bits (95), Expect = 0.002
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 6/147 (4%)
Query: 135 TASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKAAEAKATTVPDFQE 194
++ IS L +RN +E + R ++N ++ L+KAK A A +
Sbjct: 1111 SSQISRLQNIRNTIEETGNLAEQARAHVENTERLIEIASRELEKAKVAAANVSVTQPEST 1170
Query: 195 TRPRNY-ILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLEGISSTHVNHLRCL 253
P N +L+ A L +A+ +RVA+T D E LLL ++ +
Sbjct: 1171 GDPNNMTLLAEEARKLAERHKQEADDIVRVAKTANDTSTEAYNLLLRTLAGENQTAFE-- 1228
Query: 254 HEFVKSQTTYYAQCYRHMLDLQKQLGR 280
++ Y Q DL+KQ R
Sbjct: 1229 ---IEELNRKYEQAKNISQDLEKQAAR 1252
>gi|4758476 GRB2-related adaptor protein 2 [Homo sapiens]
Length = 330
Score = 41.2 bits (95), Expect = 0.002
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 334 ASGTRKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYL 391
A R AR LYD+EA + EL + E++ V L +P W G NK G P Y+
Sbjct: 270 AGRVRWARALYDFEALEDDELGFHSGEVVEV--LDSSNPSWWTGRLHNKLGLFPANYV 325
>gi|40549448 vav 2 guanine nucleotide exchange factor isoform 2
[Homo sapiens]
Length = 839
Score = 41.2 bits (95), Expect = 0.002
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 332 PPASGTRKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYL 391
P GT AR Y++ A D EL+L +++ +YS G D W GE + G P TY+
Sbjct: 776 PRVIGTAVAR--YNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYV 833
Query: 392 E 392
E
Sbjct: 834 E 834
>gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo
sapiens]
Length = 492
Score = 40.8 bits (94), Expect = 0.002
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 289 TEPASPPLSSTSPTTAAATMPVVPSVASLAPPGEA----SLCLEEVAPPASGTRK----- 339
T P L +S T + PS S A E+ S L ++ A R+
Sbjct: 196 TSPGRVDLPGSSTTLTKSFTSSSPSSPSRAKDRESPRSYSSTLTDMGRSAPRERRGTPEK 255
Query: 340 ----ARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELLS 395
A+ +YD++A S EL+ + TVY L +D +W GE + G P++Y+E L+
Sbjct: 256 EKLPAKAVYDFKAQTSKELSFKKGD--TVYILRKIDQNWYEGEHHGRVGIFPISYVEKLT 313
>gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo
sapiens]
Length = 824
Score = 40.8 bits (94), Expect = 0.002
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 289 TEPASPPLSSTSPTTAAATMPVVPSVASLAPPGEA----SLCLEEVAPPASGTRK----- 339
T P L +S T + PS S A E+ S L ++ A R+
Sbjct: 528 TSPGRVDLPGSSTTLTKSFTSSSPSSPSRAKDRESPRSYSSTLTDMGRSAPRERRGTPEK 587
Query: 340 ----ARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELLS 395
A+ +YD++A S EL+ + TVY L +D +W GE + G P++Y+E L+
Sbjct: 588 EKLPAKAVYDFKAQTSKELSFKKGD--TVYILRKIDQNWYEGEHHGRVGIFPISYVEKLT 645
>gi|224586849 sorbin and SH3 domain containing 2 isoform 5 [Homo
sapiens]
Length = 661
Score = 40.8 bits (94), Expect = 0.002
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 289 TEPASPPLSSTSPTTAAATMPVVPSVASLAPPGEA----SLCLEEVAPPASGTRK----- 339
T P L +S T + PS S A E+ S L ++ A R+
Sbjct: 365 TSPGRVDLPGSSTTLTKSFTSSSPSSPSRAKDRESPRSYSSTLTDMGRSAPRERRGTPEK 424
Query: 340 ----ARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELLS 395
A+ +YD++A S EL+ + TVY L +D +W GE + G P++Y+E L+
Sbjct: 425 EKLPAKAVYDFKAQTSKELSFKKGD--TVYILRKIDQNWYEGEHHGRVGIFPISYVEKLT 482
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,637,773
Number of Sequences: 37866
Number of extensions: 642859
Number of successful extensions: 4151
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 3807
Number of HSP's gapped (non-prelim): 478
length of query: 395
length of database: 18,247,518
effective HSP length: 104
effective length of query: 291
effective length of database: 14,309,454
effective search space: 4164051114
effective search space used: 4164051114
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.