Guide to the Human Genome
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Name: SH3GLB2 Sequence: fasta or formatted (395aa) NCBI GI: 9910352
Description:

SH3-domain GRB2-like endophilin B2

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         45           3
 C cysteine            1.0          4           1
 D aspartate           5.1         20           1
 E glutamate           8.9         35           2
 F phenylalanine       3.8         15           2
 G glycine             4.3         17           1
 H histidine           1.5          6           1
 I isoleucine          2.5         10           1
 K lysine              6.3         25           2
 L leucine            11.9         47           3
 M methionine          1.5          6           1
 N asparagine          2.8         11           1
 P proline             5.6         22           2
 Q glutamine           3.8         15           1
 R arginine            6.1         24           2
 S serine              6.6         26           2
 T threonine           7.8         31           2
 V valine              5.3         21           2
 W tryptophan          1.0          4           1
 Y tyrosine            2.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-domain GRB2-like endophilin B2 
SH3GLB1               0.584   SH3-containing protein SH3GLB1 
SH3GL1                0.101   SH3-domain GRB2-like 1 
SH3GL2                0.095   SH3-domain GRB2-like 2 
SH3GL3                0.086   SH3-domain GRB2-like 3 
ARHGAP10              0.033   Rho GTPase activating protein 10 
RICH2                 0.032   Rho GTPase-activating protein RICH2 
VAV2                  0.030   vav 2 guanine nucleotide exchange factor isoform 1 ...
ARHGAP26              0.030   GTPase regulator associated with the focal adhesion...
PSTPIP1               0.029   proline-serine-threonine phosphatase interacting pro...
SH3D19                0.029   SH3 domain containing 19 isoform c 
SH3D19                0.029   SH3 domain containing 19 isoform b 
SH3D19                0.029   SH3 domain containing 19 isoform a 
STAM                  0.026   signal transducing adaptor molecule 1 
C1orf113              0.026   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.026   SH3 domain-containing protein C1orf113 isoform 2 [H...
RUSC1                 0.023   RUN and SH3 domain containing 1 isoform c 
RUSC1                 0.023   RUN and SH3 domain containing 1 isoform b 
RUSC1                 0.023   RUN and SH3 domain containing 1 isoform a 
RUSC1                 0.023   RUN and SH3 domain containing 1 isoform d 
SH3BP1                0.023   SH3-domain binding protein 1 
ITSN1                 0.023   intersectin 1 isoform ITSN-s 
ITSN1                 0.023   intersectin 1 isoform ITSN-l 
LASP1                 0.021   LIM and SH3 protein 1 
LAMC1                 0.021   laminin, gamma 1 precursor 
GRAP2                 0.021   GRB2-related adaptor protein 2 
VAV2                  0.021   vav 2 guanine nucleotide exchange factor isoform 2 [...
SORBS2                0.021   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.021   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.021   sorbin and SH3 domain containing 2 isoform 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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