Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MAP3K7IP3 Sequence: fasta or formatted (712aa) NCBI GI: 98991767
Description:

mitogen-activated protein kinase kinase kinase 7 interacting protein 3

Referenced in:

MAP Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         36           4
 C cysteine            1.8         13           2
 D aspartate           3.2         23           2
 E glutamate           4.4         31           2
 F phenylalanine       1.4         10           2
 G glycine             4.6         33           2
 H histidine           3.4         24           1
 I isoleucine          4.4         31           1
 K lysine              3.1         22           2
 L leucine             6.0         43           3
 M methionine          2.5         18           1
 N asparagine          4.9         35           4
 P proline            13.5         96           6
 Q glutamine           9.1         65           3
 R arginine            5.6         40           2
 S serine             12.6         90           4
 T threonine           5.9         42           2
 V valine              4.2         30           2
 W tryptophan          0.4          3           1
 Y tyrosine            3.8         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase kinase kinase 7 int... 
MAP3K7IP2             0.248   mitogen-activated protein kinase kinase kinase 7 int...
RBM33                 0.038   RNA binding motif protein 33 
POLR2A                0.036   DNA-directed RNA polymerase II A 
MUC2                  0.035   mucin 2 precursor 
FLJ22184              0.031   PREDICTED: hypothetical protein FLJ22184 
PCLO                  0.030   piccolo isoform 2 
PCLO                  0.030   piccolo isoform 1 
NACA                  0.030   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.030   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.030   PREDICTED: hypothetical protein LOC80164 
SHANK1                0.030   SH3 and multiple ankyrin repeat domains 1 
MED15                 0.029   mediator complex subunit 15 isoform b 
CHD7                  0.028   chromodomain helicase DNA binding protein 7 
ARID1A                0.028   AT rich interactive domain 1A isoform a 
ARID1A                0.028   AT rich interactive domain 1A isoform b 
ATN1                  0.028   atrophin-1 
ATN1                  0.028   atrophin-1 
PTPN23                0.028   protein tyrosine phosphatase, non-receptor type 23 [...
RAPH1                 0.027   Ras association and pleckstrin homology domains 1 is...
MED15                 0.027   mediator complex subunit 15 isoform a 
RERE                  0.026   atrophin-1 like protein isoform b 
RERE                  0.026   atrophin-1 like protein isoform a 
RERE                  0.026   atrophin-1 like protein isoform a 
MLL5                  0.026   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.026   myeloid/lymphoid or mixed-lineage leukemia 5 
WNK4                  0.025   WNK lysine deficient protein kinase 4 
LOC284297             0.024   hypothetical protein LOC284297 
ZMIZ1                 0.024   retinoic acid induced 17 
ARHGAP17              0.023   nadrin isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press