CCDC11 37566

Name: CCDC11	Sequence: fasta or formatted (514aa)		NCBI GI: 94721321
Description: coiled-coil domain containing 11		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 37 2 C cysteine 1.4 7 1 D aspartate 3.9 20 1 E glutamate 16.1 83 3 F phenylalanine 1.9 10 1 G glycine 1.4 7 1 H histidine 2.3 12 2 I isoleucine 4.7 24 2 K lysine 12.5 64 3 L leucine 9.5 49 2 M methionine 2.5 13 1 N asparagine 3.5 18 2 P proline 1.8 9 2 Q glutamine 10.5 54 3 R arginine 9.7 50 2 S serine 3.1 16 2 T threonine 2.3 12 1 V valine 3.9 20 2 W tryptophan 0.4 2 1 Y tyrosine 1.4 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 11 TCHH 0.109 trichohyalin TCHP 0.107 trichoplein TCHP 0.107 trichoplein LOC283767 0.084 golgi autoantigen, golgin subfamily a-like LOC727832 0.082 golgi autoantigen, golgin subfamily a-like LOC440243 0.081 PREDICTED: Putative golgin subfamily A member 6-lik... LOC283685 0.080 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC645202 0.074 PREDICTED: hypothetical protein LOC645202 LOC283685 0.073 PREDICTED: golgi autoantigen, golgin subfamily a-li... MNS1 0.071 meiosis-specific nuclear structural 1 INCENP 0.068 inner centromere protein antigens 135/155kDa isofor... MYH10 0.068 myosin, heavy polypeptide 10, non-muscle PLEC1 0.068 plectin 1 isoform 11 PLEC1 0.068 plectin 1 isoform 10 PLEC1 0.068 plectin 1 isoform 8 PLEC1 0.068 plectin 1 isoform 7 PLEC1 0.068 plectin 1 isoform 6 PLEC1 0.068 plectin 1 isoform 3 PLEC1 0.068 plectin 1 isoform 2 PLEC1 0.068 plectin 1 isoform 1 INCENP 0.068 inner centromere protein antigens 135/155kDa isofor... HMMR 0.066 hyaluronan-mediated motility receptor isoform d [Ho... HMMR 0.066 hyaluronan-mediated motility receptor isoform a [Ho... HMMR 0.066 hyaluronan-mediated motility receptor isoform c [Ho... HMMR 0.066 hyaluronan-mediated motility receptor isoform b [Ho... MYH9 0.065 myosin, heavy polypeptide 9, non-muscle LOC100286959 0.064 PREDICTED: hypothetical protein XP_002343921 LOC400352 0.064 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.064 PREDICTED: similar to Putative golgin subfamily A m... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.