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Search of human proteins with 94400925
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|94400925 synaptonemal complex protein 2-like [Homo sapiens]
(812 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|94400925 synaptonemal complex protein 2-like [Homo sapiens] 1605 0.0
gi|38373673 synaptonemal complex protein 2 [Homo sapiens] 278 1e-74
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 45 4e-04
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 44 5e-04
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 44 5e-04
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 6e-04
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 6e-04
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 6e-04
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 6e-04
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 6e-04
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 44 8e-04
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 43 0.001
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 43 0.001
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 43 0.001
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 43 0.001
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 43 0.001
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 43 0.001
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 43 0.001
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 43 0.001
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 42 0.002
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 42 0.002
gi|190194423 SPARC-like 1 [Homo sapiens] 42 0.002
gi|190341024 SPARC-like 1 [Homo sapiens] 42 0.002
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 42 0.003
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 42 0.003
gi|31657123 Hermansky-Pudlak syndrome 5 isoform a [Homo sapiens] 41 0.004
gi|31657125 Hermansky-Pudlak syndrome 5 isoform b [Homo sapiens] 41 0.004
gi|31657127 Hermansky-Pudlak syndrome 5 isoform b [Homo sapiens] 41 0.004
gi|11225260 DNA topoisomerase I [Homo sapiens] 41 0.005
gi|109637791 transcription factor-like nuclear regulator [Homo s... 41 0.005
>gi|94400925 synaptonemal complex protein 2-like [Homo sapiens]
Length = 812
Score = 1605 bits (4155), Expect = 0.0
Identities = 812/812 (100%), Positives = 812/812 (100%)
Query: 1 MQAKNKDALQPIKEDRTGKAQDDAFWLQSLITDAFHDKGFQKIKEYFQQKESHFPQKYNR 60
MQAKNKDALQPIKEDRTGKAQDDAFWLQSLITDAFHDKGFQKIKEYFQQKESHFPQKYNR
Sbjct: 1 MQAKNKDALQPIKEDRTGKAQDDAFWLQSLITDAFHDKGFQKIKEYFQQKESHFPQKYNR 60
Query: 61 LLLYRLDRSINKELDKNEFQSVSLLLKCIQRFLVDGLKEDEPLLIRQGLIPKLVSWFERT 120
LLLYRLDRSINKELDKNEFQSVSLLLKCIQRFLVDGLKEDEPLLIRQGLIPKLVSWFERT
Sbjct: 61 LLLYRLDRSINKELDKNEFQSVSLLLKCIQRFLVDGLKEDEPLLIRQGLIPKLVSWFERT 120
Query: 121 TGILTSEGLASDTSLICVIEDFFDTALIISRSSSEGKIQMLDSFLLSLGFLVTEKTVNHL 180
TGILTSEGLASDTSLICVIEDFFDTALIISRSSSEGKIQMLDSFLLSLGFLVTEKTVNHL
Sbjct: 121 TGILTSEGLASDTSLICVIEDFFDTALIISRSSSEGKIQMLDSFLLSLGFLVTEKTVNHL 180
Query: 181 LQQEGLKTFNCILHAVPREERKKFPLSEGMCHLMKDLARTLLTVGDYDQQVAISEALCRL 240
LQQEGLKTFNCILHAVPREERKKFPLSEGMCHLMKDLARTLLTVGDYDQQVAISEALCRL
Sbjct: 181 LQQEGLKTFNCILHAVPREERKKFPLSEGMCHLMKDLARTLLTVGDYDQQVAISEALCRL 240
Query: 241 TIKKSRDELVHKWFDDEVIAEAFKEIKDREFETDSRRFLNHLNNRLGDQRRVYSFPCIAA 300
TIKKSRDELVHKWFDDEVIAEAFKEIKDREFETDSRRFLNHLNNRLGDQRRVYSFPCIAA
Sbjct: 241 TIKKSRDELVHKWFDDEVIAEAFKEIKDREFETDSRRFLNHLNNRLGDQRRVYSFPCIAA 300
Query: 301 FADEHEMRKPADEKLEKFWIDFNLGSQSVTFYIDNAENTLWDSVTLPKEAVMNFSITETE 360
FADEHEMRKPADEKLEKFWIDFNLGSQSVTFYIDNAENTLWDSVTLPKEAVMNFSITETE
Sbjct: 301 FADEHEMRKPADEKLEKFWIDFNLGSQSVTFYIDNAENTLWDSVTLPKEAVMNFSITETE 360
Query: 361 KIKIFIIYLKKPMIISYKEVMKIEIHFDLQFNISQVSIQALGEDKQMLPDQTKISSELFS 420
KIKIFIIYLKKPMIISYKEVMKIEIHFDLQFNISQVSIQALGEDKQMLPDQTKISSELFS
Sbjct: 361 KIKIFIIYLKKPMIISYKEVMKIEIHFDLQFNISQVSIQALGEDKQMLPDQTKISSELFS 420
Query: 421 KSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSH 480
KSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSH
Sbjct: 421 KSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSH 480
Query: 481 LQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTR 540
LQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTR
Sbjct: 481 LQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTR 540
Query: 541 SNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQDSFAFLTAEDS 600
SNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQDSFAFLTAEDS
Sbjct: 541 SNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQDSFAFLTAEDS 600
Query: 601 AQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDIPEGSFAK 660
AQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDIPEGSFAK
Sbjct: 601 AQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDIPEGSFAK 660
Query: 661 SQQSRLEEEVASGSPFSITEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKY 720
SQQSRLEEEVASGSPFSITEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKY
Sbjct: 661 SQQSRLEEEVASGSPFSITEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKY 720
Query: 721 ELRYRKRPFNSENAKKAPDCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHL 780
ELRYRKRPFNSENAKKAPDCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHL
Sbjct: 721 ELRYRKRPFNSENAKKAPDCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHL 780
Query: 781 EKEVLEFWGKQSADLQSFCDLQVLRFNSTQTS 812
EKEVLEFWGKQSADLQSFCDLQVLRFNSTQTS
Sbjct: 781 EKEVLEFWGKQSADLQSFCDLQVLRFNSTQTS 812
>gi|38373673 synaptonemal complex protein 2 [Homo sapiens]
Length = 1530
Score = 278 bits (712), Expect = 1e-74
Identities = 158/386 (40%), Positives = 240/386 (62%), Gaps = 10/386 (2%)
Query: 27 LQSLITDAFHDKGFQKIKEYFQQKESHFPQ-KYNRLLLYRLDRSINKELDKNEFQSVSLL 85
L+ I DA F+ +K Q + K ++ +++D I +EL+K + +VS +
Sbjct: 10 LEKCIDDALRKNDFKPLKTLLQIDICEDVKIKCSKQFFHKVDNLICRELNKEDIHNVSAI 69
Query: 86 L----KCIQRFLVDGLKEDEPLLIRQGLIPKLVSWFERTTGILTSEGLASDTSLICVIED 141
L +C + V G + +I+QGLI K+V+WFE++ I+ S+G + D +++ +IED
Sbjct: 70 LVSVGRCGKNISVLG-QAGLLTMIKQGLIQKMVAWFEKSKDIIQSQGNSKDEAVLNMIED 128
Query: 142 FFDTALIISRSSSEGKIQMLDSFLLSLGFLVTEKTVNHLLQQEGLKTFNCILHAVPREER 201
D L+I S EGK Q+++SF+ + LV + VN +QQE +K N +L +P++ R
Sbjct: 129 LVDLLLVIHDVSDEGKKQVVESFVPRICSLVIDSRVNICIQQEIIKKMNAMLDKMPQDAR 188
Query: 202 KKFPLSEGMCHLMKDLARTLLTVGDYDQQVAISEALCRLTIKKSRDELVHKWFDDEVIAE 261
K E M LM + +L GDYD QV I EALCR+T +K R EL H+WF + IA+
Sbjct: 189 KILSNQE-MLILMSSMGERILDAGDYDLQVGIVEALCRMTTEKQRQELAHQWFSMDFIAK 247
Query: 262 AFKEIKDREFETDSRRFLNHLNNRLGDQRRVYSFPCIAAFADEHEMRKPADEKLEKFWID 321
AFK IKD EFETD R FLN +N LGD+RRV++FPC++AF D++E++ P+DEKLE+FWID
Sbjct: 248 AFKRIKDSEFETDCRIFLNLVNGMLGDKRRVFTFPCLSAFLDKYELQIPSDEKLEEFWID 307
Query: 322 FNLGSQSVTFYI--DNAENTLWDSVTLPKEAVMNFSITETEKIKIFIIYLKKPMIISYKE 379
FNLGSQ+++FYI DN ++ W++VT+P+E V +SI E K+ I LK + IS +E
Sbjct: 308 FNLGSQTLSFYIAGDNDDHQ-WEAVTVPEEKVQIYSIEVRESKKLLTIILKNTVKISKRE 366
Query: 380 VMKIEIHFDLQFNISQVSIQALGEDK 405
++ ++FD I+ V+ + G K
Sbjct: 367 GKELLLYFDASLEITNVTQKIFGATK 392
Score = 61.6 bits (148), Expect = 3e-09
Identities = 93/408 (22%), Positives = 174/408 (42%), Gaps = 43/408 (10%)
Query: 434 ERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFP 493
E E E +++ N A D CL D S + G P+S + + DF
Sbjct: 1074 ETEKELSKQWKNSSLLKDAIRDNCL------DLSPRSLSGSPSSIEVTRCIEKITEKDFT 1127
Query: 494 Q------QPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRI-L 546
Q + S Y K ES +S S + T K + K++ ++ + + L
Sbjct: 1128 QDYDCITKSISPYPKTSSLESL--NSNSGVGGTIKSPKNNEKNFLCASESCSPIPRPLFL 1185
Query: 547 PVFPPSSGSG--HEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQDSFAFLTAEDSAQKT 604
P P+ + + K + L+ E + + S +SE++F + + E+ Q +
Sbjct: 1186 PRHTPTKSNTIVNRKKISSLVLTQETQNSNSYSDVSSYSSEERFMEIESPHINENYIQ-S 1244
Query: 605 ELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDIP-EGSFAKSQQ 663
+ ++ H S LS K SE EK + ++T + ++L K I E + + S +
Sbjct: 1245 KREESHLASSLS--KSSEGREKTWF---DMPCDATHVSGPTQHLSRKRIYIEDNLSNSNE 1299
Query: 664 SRLEEEV---ASGSPFSITEERELPEGISTSSLEVVPENLNGSAI--------------- 705
+EE+ A+ P + + + I S V + N +I
Sbjct: 1300 VEMEEKGERRANLLPKKLCKIEDADHHIHKMSESVSSLSTNDFSIPWETWQNEFAGIEMT 1359
Query: 706 LPTFENFTKKRKRKYELRYRKRP-FNSENAKKAPDCLIKLLNQMQLFRLNKLERFQNLVL 764
T+E + KR+ +R++ F +++ K A L + +Q Q R+ KL++FQ +++
Sbjct: 1360 YETYERLNSEFKRRNNIRHKMLSYFTTQSWKTAQQHLRTMNHQSQDSRIKKLDKFQFIII 1419
Query: 765 QELSSLKQDIQALEHLEKEVLEFWGKQSADLQSFCDLQVLRFNSTQTS 812
+EL + ++D Q+L+ LEKE ++FW K ++ + R + +TS
Sbjct: 1420 EELENFEKDSQSLKDLEKEFVDFWEKIFQKFSAYQKSEQQRLHLLKTS 1467
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 44.7 bits (104), Expect = 4e-04
Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 36/304 (11%)
Query: 415 SSELFSKSDKEDRESPSGLERETEQAEE----------STNMVEFMSAEDDRCLITLHLN 464
SS S SD + E + ++T ++ +T + S+ED +
Sbjct: 220 SSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDS----SSDEE 275
Query: 465 DQSEPPVIGEPASDSHLQP--VPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSN 522
++ + P+ +P S + P PP Q PK K ES++DSS S +
Sbjct: 276 EEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEE 335
Query: 523 QKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSP- 581
+KK K+ S+ T+ + SS S +D +PS+ +N++ P
Sbjct: 336 EKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDE---APSKPAGTTKNSSNKPA 392
Query: 582 -KTSEQKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTS 640
T + + A QK + S S SE+E+ K+V + T+ +
Sbjct: 393 VTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMV---ATTKPKA 449
Query: 641 LKHKLRNLEDKDIPEGSFAKSQQSRLEEEVASGSPFSITEERELPEGISTSSLEVVPENL 700
+L K P+GS + +S S S +EE E E S S+++ P+ +
Sbjct: 450 TAKAALSLPAKQAPQGS----------RDSSSDSDSSSSEEEE--EKTSKSAVKKKPQKV 497
Query: 701 NGSA 704
G A
Sbjct: 498 AGGA 501
Score = 36.2 bits (82), Expect = 0.13
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 23/184 (12%)
Query: 508 SNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSP 567
S SS S+ S + +++K+ KS +K + G + +
Sbjct: 466 SRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDS 525
Query: 568 SEKEIPEQNNTTSPKTSEQKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKP 627
SE+E + SP+ K + A LTA++ + K+SE+EE+
Sbjct: 526 SEEEEEKLKGKGSPRPQAPKANGTSA-LTAQNG---------------KAAKNSEEEEEE 569
Query: 628 KIVNQESLTESTSLKHKLRN--LEDKDIPEGSFAKSQ-----QSRLEEEVASGSPFSITE 680
K +++S SLK + +N ++ + P+ K Q R + E + SPF
Sbjct: 570 KKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKKIKLQTPNTFPKRKKGEKRASSPFRRVR 629
Query: 681 EREL 684
E E+
Sbjct: 630 EEEI 633
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 44.3 bits (103), Expect = 5e-04
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 21/259 (8%)
Query: 429 SPSGLERETEQAEESTNMVEFMSA-----EDDRCLITLHLNDQSEPPVIGEPASDSHLQP 483
SP G E +E+ EE+ ++ + M A + + L L + + P + + A+++ Q
Sbjct: 2256 SPPGGEGASERIEETMSVHDIMKAFQSGRDPSKELAGLFEHKSAVSPDVHKSAAETSAQH 2315
Query: 484 VPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLKSYSSRKK-TRTRSN 542
D +PK + E + +E+ +K + Y +K +R N
Sbjct: 2316 AEK----DNQMKPKLERIIEVHIEKGNQAEPTEVIIRETKKHPEKEMYVYQKDLSRGDIN 2371
Query: 543 LR-ILP----VFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQDSFAFLTA 597
L+ LP FP S G ++++ S E + +P + E+ + S A L +
Sbjct: 2372 LKDFLPEKHDAFPCSEEQGQQEEEELTAEESLPSYLESSRVNTPVSQEEDSRPSSAQLIS 2431
Query: 598 EDSAQKTELQDPHSL----SELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDI 653
+DS + +L HS+ ELS L+ K++ E L S S + ++ D
Sbjct: 2432 DDSYKTLKLLSQHSIEYHDDELSELRGESYRFAEKMLLSEKLDVSHSDTEE--SVTDHAG 2489
Query: 654 PEGSFAKSQQSRLEEEVAS 672
P S + R E++A+
Sbjct: 2490 PPSSELQGSDKRSREKIAT 2508
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 44.3 bits (103), Expect = 5e-04
Identities = 51/235 (21%), Positives = 91/235 (38%), Gaps = 26/235 (11%)
Query: 506 SESNQDSSTSELSWT--SNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAK 563
+ S+ ++S S+ WT SN+ KK K+ KK + SSGS + A+
Sbjct: 91 ASSDSETSDSDDEWTFGSNKNKKKGKARKIEKKGTMKKQANKTA----SSGSSDKDSSAE 146
Query: 564 LLSPSEKEIPEQNNTTSPKTS-------EQKFQDSFAFLTAEDSAQKTELQDPHSLSELS 616
+P E E+ + ++ +S +S +++F D + D + L E
Sbjct: 147 SSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARL-------EQM 199
Query: 617 SLKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDIPEGSFAKSQQSRLEEEVASGSPF 676
+ K E E +I +E L +K KL+ + K+ K ++ + EEE
Sbjct: 200 TEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKE------KKEKKKKQEEEQEKKKLT 253
Query: 677 SITEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNS 731
I E + S + A+ K++ R EL +K+P +
Sbjct: 254 QIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKT 308
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 43.9 bits (102), Expect = 6e-04
Identities = 68/327 (20%), Positives = 126/327 (38%), Gaps = 68/327 (20%)
Query: 417 ELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPA 476
E + + +R+ + + EQ E E + R ++ H E +
Sbjct: 158 EQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMRED--YSDKV 215
Query: 477 SDSHLQPVPPFGVPDFPQQPKSHY-----RKHLFSESNQDSST-SELSWTSNQKKKSLKS 530
SH PP + P+ + RK + E ++ S+L S+ ++K+ +
Sbjct: 216 KASHWSRSPP-------RPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSA 268
Query: 531 YSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQD 590
SS + SGSG E+++ E+E E+ +TS ++ E++ ++
Sbjct: 269 ESSSAE----------------SGSGSEEEE------EEEEEEEEEGSTSEESEEEEEEE 306
Query: 591 SFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLED 650
E++ +E S E+S + SEDEE+ N+ L
Sbjct: 307 EEE---EEETGSNSEEASEQSAEEVSEEEMSEDEERE---NENHLLV------------- 347
Query: 651 KDIPEGSFAK--SQQSRLEEEVASGSPFS--ITEERELPEGISTSSLEVVPE------NL 700
+PE F + + EEEV G+P S +TE +P+ + S +E+ E L
Sbjct: 348 --VPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPAL 405
Query: 701 NGSAILPTFENFTKKRKRKYELRYRKR 727
G + F+ + + Y + YR +
Sbjct: 406 QGCRSVEEFQCLNRIEEGTYGVVYRAK 432
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 43.9 bits (102), Expect = 6e-04
Identities = 68/327 (20%), Positives = 126/327 (38%), Gaps = 68/327 (20%)
Query: 417 ELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPA 476
E + + +R+ + + EQ E E + R ++ H E +
Sbjct: 167 EQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMRED--YSDKV 224
Query: 477 SDSHLQPVPPFGVPDFPQQPKSHY-----RKHLFSESNQDSST-SELSWTSNQKKKSLKS 530
SH PP + P+ + RK + E ++ S+L S+ ++K+ +
Sbjct: 225 KASHWSRSPP-------RPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSA 277
Query: 531 YSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQD 590
SS + SGSG E+++ E+E E+ +TS ++ E++ ++
Sbjct: 278 ESSSAE----------------SGSGSEEEE------EEEEEEEEEGSTSEESEEEEEEE 315
Query: 591 SFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLED 650
E++ +E S E+S + SEDEE+ N+ L
Sbjct: 316 EEE---EEETGSNSEEASEQSAEEVSEEEMSEDEERE---NENHLLV------------- 356
Query: 651 KDIPEGSFAK--SQQSRLEEEVASGSPFS--ITEERELPEGISTSSLEVVPE------NL 700
+PE F + + EEEV G+P S +TE +P+ + S +E+ E L
Sbjct: 357 --VPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPAL 414
Query: 701 NGSAILPTFENFTKKRKRKYELRYRKR 727
G + F+ + + Y + YR +
Sbjct: 415 QGCRSVEEFQCLNRIEEGTYGVVYRAK 441
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 43.9 bits (102), Expect = 6e-04
Identities = 68/327 (20%), Positives = 126/327 (38%), Gaps = 68/327 (20%)
Query: 417 ELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPA 476
E + + +R+ + + EQ E E + R ++ H E +
Sbjct: 135 EQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMRED--YSDKV 192
Query: 477 SDSHLQPVPPFGVPDFPQQPKSHY-----RKHLFSESNQDSST-SELSWTSNQKKKSLKS 530
SH PP + P+ + RK + E ++ S+L S+ ++K+ +
Sbjct: 193 KASHWSRSPP-------RPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSA 245
Query: 531 YSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQD 590
SS + SGSG E+++ E+E E+ +TS ++ E++ ++
Sbjct: 246 ESSSAE----------------SGSGSEEEE------EEEEEEEEEGSTSEESEEEEEEE 283
Query: 591 SFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLED 650
E++ +E S E+S + SEDEE+ N+ L
Sbjct: 284 EEE---EEETGSNSEEASEQSAEEVSEEEMSEDEERE---NENHLLV------------- 324
Query: 651 KDIPEGSFAK--SQQSRLEEEVASGSPFS--ITEERELPEGISTSSLEVVPE------NL 700
+PE F + + EEEV G+P S +TE +P+ + S +E+ E L
Sbjct: 325 --VPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPAL 382
Query: 701 NGSAILPTFENFTKKRKRKYELRYRKR 727
G + F+ + + Y + YR +
Sbjct: 383 QGCRSVEEFQCLNRIEEGTYGVVYRAK 409
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 43.9 bits (102), Expect = 6e-04
Identities = 68/327 (20%), Positives = 126/327 (38%), Gaps = 68/327 (20%)
Query: 417 ELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPA 476
E + + +R+ + + EQ E E + R ++ H E +
Sbjct: 124 EQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMRED--YSDKV 181
Query: 477 SDSHLQPVPPFGVPDFPQQPKSHY-----RKHLFSESNQDSST-SELSWTSNQKKKSLKS 530
SH PP + P+ + RK + E ++ S+L S+ ++K+ +
Sbjct: 182 KASHWSRSPP-------RPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSA 234
Query: 531 YSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQD 590
SS + SGSG E+++ E+E E+ +TS ++ E++ ++
Sbjct: 235 ESSSAE----------------SGSGSEEEE------EEEEEEEEEGSTSEESEEEEEEE 272
Query: 591 SFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLED 650
E++ +E S E+S + SEDEE+ N+ L
Sbjct: 273 EEE---EEETGSNSEEASEQSAEEVSEEEMSEDEERE---NENHLLV------------- 313
Query: 651 KDIPEGSFAK--SQQSRLEEEVASGSPFS--ITEERELPEGISTSSLEVVPE------NL 700
+PE F + + EEEV G+P S +TE +P+ + S +E+ E L
Sbjct: 314 --VPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPAL 371
Query: 701 NGSAILPTFENFTKKRKRKYELRYRKR 727
G + F+ + + Y + YR +
Sbjct: 372 QGCRSVEEFQCLNRIEEGTYGVVYRAK 398
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 43.9 bits (102), Expect = 6e-04
Identities = 68/327 (20%), Positives = 126/327 (38%), Gaps = 68/327 (20%)
Query: 417 ELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPA 476
E + + +R+ + + EQ E E + R ++ H E +
Sbjct: 169 EQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMRED--YSDKV 226
Query: 477 SDSHLQPVPPFGVPDFPQQPKSHY-----RKHLFSESNQDSST-SELSWTSNQKKKSLKS 530
SH PP + P+ + RK + E ++ S+L S+ ++K+ +
Sbjct: 227 KASHWSRSPP-------RPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSA 279
Query: 531 YSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQD 590
SS + SGSG E+++ E+E E+ +TS ++ E++ ++
Sbjct: 280 ESSSAE----------------SGSGSEEEE------EEEEEEEEEGSTSEESEEEEEEE 317
Query: 591 SFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLED 650
E++ +E S E+S + SEDEE+ N+ L
Sbjct: 318 EEE---EEETGSNSEEASEQSAEEVSEEEMSEDEERE---NENHLLV------------- 358
Query: 651 KDIPEGSFAK--SQQSRLEEEVASGSPFS--ITEERELPEGISTSSLEVVPE------NL 700
+PE F + + EEEV G+P S +TE +P+ + S +E+ E L
Sbjct: 359 --VPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPAL 416
Query: 701 NGSAILPTFENFTKKRKRKYELRYRKR 727
G + F+ + + Y + YR +
Sbjct: 417 QGCRSVEEFQCLNRIEEGTYGVVYRAK 443
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 43.5 bits (101), Expect = 8e-04
Identities = 43/198 (21%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 600 SAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQ--ESLTESTSLKH-KLRNLEDKDIPEG 656
S+ + +LQ E K ++ EE+ +I+ Q E+L++ T ++H +L N + E
Sbjct: 782 SSTRLDLQKKSEALESIKQKLTKQEEEKQILKQDFETLSQETKIQHEELNNRIQTTVTEL 841
Query: 657 SFAKSQQSRLEEEVASGSPFSITEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKR 716
K ++ L E+++ + ++ + + S E EN G A + E K+
Sbjct: 842 QKVKMEKEALMTELSTVK----DKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKEL 897
Query: 717 KRKYELRYRKRPFNSENAKKAPDCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQA 776
K + +++ + KK+ + + +Q++L +L Q ++Q ++LKQ+ +
Sbjct: 898 KHQLQVQMENTLKEQKELKKSLEKEKEASHQLKL----ELNSMQEQLIQAQNTLKQNEKE 953
Query: 777 LEHLEKEVLEFWGKQSAD 794
+ L+ + E KQS++
Sbjct: 954 EQQLQGNINEL--KQSSE 969
Score = 38.5 bits (88), Expect = 0.025
Identities = 129/607 (21%), Positives = 241/607 (39%), Gaps = 86/607 (14%)
Query: 216 DLARTLLTVGDYDQQVAISEALCRLTIKKSRDELVHKWFDDEVIAEAFKEIKDREFETDS 275
DL + L +GD DQ++ EAL L K L+ K +D + +I+ E ET
Sbjct: 510 DLEQVLRQIGDKDQKIQNLEAL--LQKSKENISLLEKERED-----LYAKIQAGEGETAV 562
Query: 276 RRFLNHLNNRLGDQRRVYSFPCIAAFADEHEMRKPADEKLEKFWIDFNLGSQSVTFYIDN 335
L N+ L +Q + ++ E K A E L Q ++
Sbjct: 563 LNQLQEKNHTLQEQVTQLT----EKLKNQSESHKQAQENLHD-------QVQEQKAHLRA 611
Query: 336 AENTLWDSVTLPKEAVMNFSITET-EKIKIFIIYLK-KPMIISYKEVMKIEIHFDLQFNI 393
A++ + T E +N + E+ EK+ I +K K ++ E K DLQ ++
Sbjct: 612 AQDRVLSLETSVNE--LNSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHL 669
Query: 394 SQVSIQALGEDKQMLPDQTKISSELFSKSDK--EDRESPSGLERETEQAEESTNMVEFMS 451
+ Q +DKQ + KI+++L + K + +E S LE ++ +E +++S
Sbjct: 670 D--TAQNALQDKQQ--ELNKITTQLDQVTAKLQDKQEHCSQLESHLKEYKE-----KYLS 720
Query: 452 AEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQD 511
E ++ E + A ++ + D QQ + + ++ +
Sbjct: 721 LEQK--------TEELEGQIKKLEADSLEVKASKEQALQDLQQQRQLN--------TDLE 764
Query: 512 SSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLL-SPSEK 570
+ELS +K+ + S TR +L+ E + KL EK
Sbjct: 765 LRATELSKQLEMEKEIVSS--------TRLDLQ-------KKSEALESIKQKLTKQEEEK 809
Query: 571 EIPEQN-NTTSPKTSEQKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKI 629
+I +Q+ T S +T Q + + T QK +++ ++ELS++K + +
Sbjct: 810 QILKQDFETLSQETKIQHEELNNRIQTTVTELQKVKMEKEALMTELSTVKDKLSKVSDSL 869
Query: 630 VNQESLTESTSLKHKLRNLE-DKDIPEGSFAKSQQSRLEEEVASGSPFSITEERELPEGI 688
N +S E + K K L+ +K E Q + S+ +E+E +
Sbjct: 870 KNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQMENTLKEQKELKKSLEKEKEASHQL 929
Query: 689 STSSLEVVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKAPDCL-----IK 743
+ + + L E K +++ + + +SE KK + L I
Sbjct: 930 KLELNSMQEQLIQAQNTLKQNE----KEEQQLQGNINELKQSSEQKKKQIEALQGELKIA 985
Query: 744 LLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHLEKEVLE--------FWGKQSADL 795
+L + +L NKL++ QEL++ K+ I L++ ++ E F+G++S L
Sbjct: 986 VLQKTEL--ENKLQQQLTQAAQELAAEKEKISVLQNNYEKSQETFKQLQSDFYGRESELL 1043
Query: 796 QSFCDLQ 802
+ DL+
Sbjct: 1044 ATRQDLK 1050
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 42.7 bits (99), Expect = 0.001
Identities = 79/409 (19%), Positives = 152/409 (37%), Gaps = 62/409 (15%)
Query: 395 QVSIQALGEDKQMLPDQTKISSELFSKSDKEDRES--------PSGLERETEQAEESTNM 446
+ I ++ E+K L D T + L S + D++ + L ++ ++
Sbjct: 316 KAEISSIRENKDRLSDSTTGADSLLDISSEADQQDLLSLLQAKVASLTLHNKELQDKLQA 375
Query: 447 VEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFS 506
AE D + H P +G+P S PD P S
Sbjct: 376 KSPKEAEADLSFDSYHSTQTDLGPSLGKPGETSP---------PDSKSSPSVLIHSLGKS 426
Query: 507 ESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLS 566
++ D +L +K L+S + +K L++ + +A+L+
Sbjct: 427 TTDNDVRIQQLQEILQDLQKRLESSEAERK-----QLQV----------ELQSRRAELVC 471
Query: 567 PSEKEIPEQNNTTSPKTSE--QKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSE-D 623
+ EI E ++ S K E K++++ + + K L P S+ S
Sbjct: 472 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 531
Query: 624 EEKPKIVNQE---SLTESTSLKHKLRNLEDK--DIPEGSFAKSQQSRLEEEVASGSPFSI 678
EE+ ++ Q+ +L ES K K+R LE+K + +G+ K EE
Sbjct: 532 EEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEE---------- 581
Query: 679 TEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKAP 738
SS V EN+N FE + + ++ +L+ + ++ A
Sbjct: 582 ----------MKSSYCSVIENMNKEKAF-LFEKYQEAQEEIMKLKDTLKSQMTQEASDEA 630
Query: 739 DCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHLEKEVLEF 787
+ + + +N+M + LNK + + +E + +D + + LE E+
Sbjct: 631 EDMKEAMNRM-IDELNKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEY 678
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 42.7 bits (99), Expect = 0.001
Identities = 79/409 (19%), Positives = 152/409 (37%), Gaps = 62/409 (15%)
Query: 395 QVSIQALGEDKQMLPDQTKISSELFSKSDKEDRES--------PSGLERETEQAEESTNM 446
+ I ++ E+K L D T + L S + D++ + L ++ ++
Sbjct: 305 KAEISSIRENKDRLSDSTTGADSLLDISSEADQQDLLSLLQAKVASLTLHNKELQDKLQA 364
Query: 447 VEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFS 506
AE D + H P +G+P S PD P S
Sbjct: 365 KSPKEAEADLSFDSYHSTQTDLGPSLGKPGETSP---------PDSKSSPSVLIHSLGKS 415
Query: 507 ESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLS 566
++ D +L +K L+S + +K L++ + +A+L+
Sbjct: 416 TTDNDVRIQQLQEILQDLQKRLESSEAERK-----QLQV----------ELQSRRAELVC 460
Query: 567 PSEKEIPEQNNTTSPKTSE--QKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSE-D 623
+ EI E ++ S K E K++++ + + K L P S+ S
Sbjct: 461 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 520
Query: 624 EEKPKIVNQE---SLTESTSLKHKLRNLEDK--DIPEGSFAKSQQSRLEEEVASGSPFSI 678
EE+ ++ Q+ +L ES K K+R LE+K + +G+ K EE
Sbjct: 521 EEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEE---------- 570
Query: 679 TEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKAP 738
SS V EN+N FE + + ++ +L+ + ++ A
Sbjct: 571 ----------MKSSYCSVIENMNKEKAF-LFEKYQEAQEEIMKLKDTLKSQMTQEASDEA 619
Query: 739 DCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHLEKEVLEF 787
+ + + +N+M + LNK + + +E + +D + + LE E+
Sbjct: 620 EDMKEAMNRM-IDELNKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEY 667
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 42.7 bits (99), Expect = 0.001
Identities = 79/409 (19%), Positives = 152/409 (37%), Gaps = 62/409 (15%)
Query: 395 QVSIQALGEDKQMLPDQTKISSELFSKSDKEDRES--------PSGLERETEQAEESTNM 446
+ I ++ E+K L D T + L S + D++ + L ++ ++
Sbjct: 284 KAEISSIRENKDRLSDSTTGADSLLDISSEADQQDLLSLLQAKVASLTLHNKELQDKLQA 343
Query: 447 VEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFS 506
AE D + H P +G+P S PD P S
Sbjct: 344 KSPKEAEADLSFDSYHSTQTDLGPSLGKPGETSP---------PDSKSSPSVLIHSLGKS 394
Query: 507 ESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLS 566
++ D +L +K L+S + +K L++ + +A+L+
Sbjct: 395 TTDNDVRIQQLQEILQDLQKRLESSEAERK-----QLQV----------ELQSRRAELVC 439
Query: 567 PSEKEIPEQNNTTSPKTSE--QKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSE-D 623
+ EI E ++ S K E K++++ + + K L P S+ S
Sbjct: 440 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 499
Query: 624 EEKPKIVNQE---SLTESTSLKHKLRNLEDK--DIPEGSFAKSQQSRLEEEVASGSPFSI 678
EE+ ++ Q+ +L ES K K+R LE+K + +G+ K EE
Sbjct: 500 EEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEE---------- 549
Query: 679 TEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKAP 738
SS V EN+N FE + + ++ +L+ + ++ A
Sbjct: 550 ----------MKSSYCSVIENMNKEKAF-LFEKYQEAQEEIMKLKDTLKSQMTQEASDEA 598
Query: 739 DCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHLEKEVLEF 787
+ + + +N+M + LNK + + +E + +D + + LE E+
Sbjct: 599 EDMKEAMNRM-IDELNKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEY 646
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 42.7 bits (99), Expect = 0.001
Identities = 79/409 (19%), Positives = 152/409 (37%), Gaps = 62/409 (15%)
Query: 395 QVSIQALGEDKQMLPDQTKISSELFSKSDKEDRES--------PSGLERETEQAEESTNM 446
+ I ++ E+K L D T + L S + D++ + L ++ ++
Sbjct: 313 KAEISSIRENKDRLSDSTTGADSLLDISSEADQQDLLSLLQAKVASLTLHNKELQDKLQA 372
Query: 447 VEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFS 506
AE D + H P +G+P S PD P S
Sbjct: 373 KSPKEAEADLSFDSYHSTQTDLGPSLGKPGETSP---------PDSKSSPSVLIHSLGKS 423
Query: 507 ESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLS 566
++ D +L +K L+S + +K L++ + +A+L+
Sbjct: 424 TTDNDVRIQQLQEILQDLQKRLESSEAERK-----QLQV----------ELQSRRAELVC 468
Query: 567 PSEKEIPEQNNTTSPKTSE--QKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSE-D 623
+ EI E ++ S K E K++++ + + K L P S+ S
Sbjct: 469 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 528
Query: 624 EEKPKIVNQE---SLTESTSLKHKLRNLEDK--DIPEGSFAKSQQSRLEEEVASGSPFSI 678
EE+ ++ Q+ +L ES K K+R LE+K + +G+ K EE
Sbjct: 529 EEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEE---------- 578
Query: 679 TEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKAP 738
SS V EN+N FE + + ++ +L+ + ++ A
Sbjct: 579 ----------MKSSYCSVIENMNKEKAF-LFEKYQEAQEEIMKLKDTLKSQMTQEASDEA 627
Query: 739 DCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHLEKEVLEF 787
+ + + +N+M + LNK + + +E + +D + + LE E+
Sbjct: 628 EDMKEAMNRM-IDELNKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEY 675
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 42.7 bits (99), Expect = 0.001
Identities = 79/409 (19%), Positives = 152/409 (37%), Gaps = 62/409 (15%)
Query: 395 QVSIQALGEDKQMLPDQTKISSELFSKSDKEDRES--------PSGLERETEQAEESTNM 446
+ I ++ E+K L D T + L S + D++ + L ++ ++
Sbjct: 313 KAEISSIRENKDRLSDSTTGADSLLDISSEADQQDLLSLLQAKVASLTLHNKELQDKLQA 372
Query: 447 VEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFS 506
AE D + H P +G+P S PD P S
Sbjct: 373 KSPKEAEADLSFDSYHSTQTDLGPSLGKPGETSP---------PDSKSSPSVLIHSLGKS 423
Query: 507 ESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLS 566
++ D +L +K L+S + +K L++ + +A+L+
Sbjct: 424 TTDNDVRIQQLQEILQDLQKRLESSEAERK-----QLQV----------ELQSRRAELVC 468
Query: 567 PSEKEIPEQNNTTSPKTSE--QKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSE-D 623
+ EI E ++ S K E K++++ + + K L P S+ S
Sbjct: 469 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 528
Query: 624 EEKPKIVNQE---SLTESTSLKHKLRNLEDK--DIPEGSFAKSQQSRLEEEVASGSPFSI 678
EE+ ++ Q+ +L ES K K+R LE+K + +G+ K EE
Sbjct: 529 EEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEE---------- 578
Query: 679 TEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKAP 738
SS V EN+N FE + + ++ +L+ + ++ A
Sbjct: 579 ----------MKSSYCSVIENMNKEKAF-LFEKYQEAQEEIMKLKDTLKSQMTQEASDEA 627
Query: 739 DCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHLEKEVLEF 787
+ + + +N+M + LNK + + +E + +D + + LE E+
Sbjct: 628 EDMKEAMNRM-IDELNKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEY 675
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 42.7 bits (99), Expect = 0.001
Identities = 79/409 (19%), Positives = 152/409 (37%), Gaps = 62/409 (15%)
Query: 395 QVSIQALGEDKQMLPDQTKISSELFSKSDKEDRES--------PSGLERETEQAEESTNM 446
+ I ++ E+K L D T + L S + D++ + L ++ ++
Sbjct: 313 KAEISSIRENKDRLSDSTTGADSLLDISSEADQQDLLSLLQAKVASLTLHNKELQDKLQA 372
Query: 447 VEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFS 506
AE D + H P +G+P S PD P S
Sbjct: 373 KSPKEAEADLSFDSYHSTQTDLGPSLGKPGETSP---------PDSKSSPSVLIHSLGKS 423
Query: 507 ESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLS 566
++ D +L +K L+S + +K L++ + +A+L+
Sbjct: 424 TTDNDVRIQQLQEILQDLQKRLESSEAERK-----QLQV----------ELQSRRAELVC 468
Query: 567 PSEKEIPEQNNTTSPKTSE--QKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSE-D 623
+ EI E ++ S K E K++++ + + K L P S+ S
Sbjct: 469 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 528
Query: 624 EEKPKIVNQE---SLTESTSLKHKLRNLEDK--DIPEGSFAKSQQSRLEEEVASGSPFSI 678
EE+ ++ Q+ +L ES K K+R LE+K + +G+ K EE
Sbjct: 529 EEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEE---------- 578
Query: 679 TEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKAP 738
SS V EN+N FE + + ++ +L+ + ++ A
Sbjct: 579 ----------MKSSYCSVIENMNKEKAF-LFEKYQEAQEEIMKLKDTLKSQMTQEASDEA 627
Query: 739 DCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQALEHLEKEVLEF 787
+ + + +N+M + LNK + + +E + +D + + LE E+
Sbjct: 628 EDMKEAMNRM-IDELNKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEY 675
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 42.7 bits (99), Expect = 0.001
Identities = 49/221 (22%), Positives = 83/221 (37%), Gaps = 6/221 (2%)
Query: 412 TKISSELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAED-DRCLITLHLNDQSEPP 470
T S + S SD + SGL+R+T + S + ++ D D+ ++ + SE
Sbjct: 134 TAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESS 193
Query: 471 VIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLKS 530
E SD P V + P +K ++ S ++ + +S
Sbjct: 194 SESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARS 253
Query: 531 YSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQD 590
SS + + S+ + PP EK K K PE+ ++S S+ D
Sbjct: 254 ASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPK--PRGRKPKPERPPSSSSSDSDSDEVD 311
Query: 591 SFAFLTAEDSAQKTELQ---DPHSLSELSSLKHSEDEEKPK 628
+ D A++ EL+ EL L+ E EEK +
Sbjct: 312 RISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKER 352
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 42.7 bits (99), Expect = 0.001
Identities = 49/221 (22%), Positives = 83/221 (37%), Gaps = 6/221 (2%)
Query: 412 TKISSELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAED-DRCLITLHLNDQSEPP 470
T S + S SD + SGL+R+T + S + ++ D D+ ++ + SE
Sbjct: 134 TAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESS 193
Query: 471 VIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLKS 530
E SD P V + P +K ++ S ++ + +S
Sbjct: 194 SESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARS 253
Query: 531 YSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQD 590
SS + + S+ + PP EK K K PE+ ++S S+ D
Sbjct: 254 ASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPK--PRGRKPKPERPPSSSSSDSDSDEVD 311
Query: 591 SFAFLTAEDSAQKTELQ---DPHSLSELSSLKHSEDEEKPK 628
+ D A++ EL+ EL L+ E EEK +
Sbjct: 312 RISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKER 352
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 42.4 bits (98), Expect = 0.002
Identities = 103/473 (21%), Positives = 191/473 (40%), Gaps = 88/473 (18%)
Query: 344 VTLPKEAV---MNFSITETEKIKIFIIYLKKPMIISYKEVMKIEIHFDLQFNISQVSIQA 400
+T KEA+ ++ + E EKIK + K +I ++ + I+
Sbjct: 312 LTSEKEALQEQLDERLQELEKIKDLHMAEKTKLITQLRDAKNL--------------IEQ 357
Query: 401 LGEDKQMLPDQTKISSELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLIT 460
L +DK M+ +TK R+ LE + E+ + + ++ M+ + +
Sbjct: 358 LEQDKGMVIAETK-------------RQMHETLEMKEEEIAQLRSRIKQMTTQGEE---- 400
Query: 461 LHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWT 520
L +Q E E A+ L+ Q R+ L +E ++ T E T
Sbjct: 401 --LREQKEK---SERAAFEELEKALSTA------QKTEEARRKLKAEMDEQIKTIEK--T 447
Query: 521 SNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEI--PEQNNT 578
S +++ SL+ SR K ++ V SS E+ AKL EKE+ EQ T
Sbjct: 448 SEEERISLQQELSRVKQE------VVDVMKKSS----EEQIAKLQKLHEKELARKEQELT 497
Query: 579 TSPKTSEQKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTES 638
+T E++FQ+ A + +Q L+ + SL E E + K + LTES
Sbjct: 498 KKLQTREREFQEQMK--VALEKSQSEYLKISQEKEQQESLALEELELQKKAI----LTES 551
Query: 639 TSLKHKLRNLEDKDIPEGSFAKSQQSRLEEEVASGSPFSITEERELPEGISTSSLEVVPE 698
++KLR+L+ + A++ ++R+ E+ S S+ E + + ++ LE
Sbjct: 552 ---ENKLRDLQQE-------AETYRTRI-LELESSLEKSLQENKNQSKDLAV-HLEAEKN 599
Query: 699 NLNGSAILPTFENFTKKRKRKYE--------LRYRKRPFNSENAKKAPDCLIK---LLNQ 747
N + ++ T+ K++ L+ K+ + +E K C + LL
Sbjct: 600 KHNKEITVMVEKHKTELESLKHQQDALWTEKLQVLKQQYQTEMEKLREKCEQEKETLLKD 659
Query: 748 MQLFRLNKLERFQNLVLQELSSLKQDIQALEHLEKEVLEFWGKQSADLQSFCD 800
++ +E L++L + ++++L EVL+ K +L D
Sbjct: 660 KEIIFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHKLEEELSVLKD 712
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
3 [Homo sapiens]
Length = 526
Score = 42.4 bits (98), Expect = 0.002
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 37/185 (20%)
Query: 553 SGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQDSFAFLTAEDSAQKTELQDPHSL 612
SGSG E+++ E+E E+ +TS ++ E++ ++ E++ +E S
Sbjct: 30 SGSGSEEEE------EEEEEEEEEGSTSEESEEEEEEEEEE---EEETGSNSEEASEQSA 80
Query: 613 SELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDIPEGSFAK--SQQSRLEEEV 670
E+S + SEDEE+ N+ L +PE F + + EEEV
Sbjct: 81 EEVSEEEMSEDEERE---NENHLLV---------------VPESRFDRDSGESEEAEEEV 122
Query: 671 ASGSPFS--ITEERELPEGISTSSLEVVPE------NLNGSAILPTFENFTKKRKRKYEL 722
G+P S +TE +P+ + S +E+ E L G + F+ + + Y +
Sbjct: 123 GEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPALQGCRSVEEFQCLNRIEEGTYGV 182
Query: 723 RYRKR 727
YR +
Sbjct: 183 VYRAK 187
>gi|190194423 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 42.0 bits (97), Expect = 0.002
Identities = 55/280 (19%), Positives = 104/280 (37%), Gaps = 30/280 (10%)
Query: 378 KEVMKIEIHFDLQFNISQVSIQALGEDKQMLPDQTKISSELFSKSDKEDRESPSG----- 432
+ + K E + + N S + + Q L DQ + + +E+ E G
Sbjct: 155 ESITKREENQEQPRNYSHHQLNRSSKHSQGLRDQGNQEQDPNISNGEEEEEKEPGEVGTH 214
Query: 433 ---LERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGV 489
ER+TE E N + E+D L + +P + + D F
Sbjct: 215 NDNQERKTELPREHANSKQ----EEDNTQSDDILEESDQPTQVSKMQEDE-------FDQ 263
Query: 490 PDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVF 549
+ Q+ S+ + SN + E W S + K L++ S+ K+T ++ L +
Sbjct: 264 GNQEQEDNSNAEMEEENASNVNKHIQETEWQSQEGKTGLEAISNHKETEEKTVSEALLME 323
Query: 550 PPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPK--TSEQKFQDSFAFLTAEDSAQ----- 602
P G+ ++ + + + T P+ S+ F S AFL AE +
Sbjct: 324 PTDDGNTTPRNHG--VDDDGDDDGDDGGTDGPRHSASDDYFIPSQAFLEAERAQSIAYHL 381
Query: 603 --KTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTS 640
+ + + H + + + E +E K N + E++S
Sbjct: 382 KIEEQREKVHENENIGTTEPGEHQEAKKAENSSNEEETSS 421
>gi|190341024 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 42.0 bits (97), Expect = 0.002
Identities = 55/280 (19%), Positives = 104/280 (37%), Gaps = 30/280 (10%)
Query: 378 KEVMKIEIHFDLQFNISQVSIQALGEDKQMLPDQTKISSELFSKSDKEDRESPSG----- 432
+ + K E + + N S + + Q L DQ + + +E+ E G
Sbjct: 155 ESITKREENQEQPRNYSHHQLNRSSKHSQGLRDQGNQEQDPNISNGEEEEEKEPGEVGTH 214
Query: 433 ---LERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPFGV 489
ER+TE E N + E+D L + +P + + D F
Sbjct: 215 NDNQERKTELPREHANSKQ----EEDNTQSDDILEESDQPTQVSKMQEDE-------FDQ 263
Query: 490 PDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVF 549
+ Q+ S+ + SN + E W S + K L++ S+ K+T ++ L +
Sbjct: 264 GNQEQEDNSNAEMEEENASNVNKHIQETEWQSQEGKTGLEAISNHKETEEKTVSEALLME 323
Query: 550 PPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPK--TSEQKFQDSFAFLTAEDSAQ----- 602
P G+ ++ + + + T P+ S+ F S AFL AE +
Sbjct: 324 PTDDGNTTPRNHG--VDDDGDDDGDDGGTDGPRHSASDDYFIPSQAFLEAERAQSIAYHL 381
Query: 603 --KTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTS 640
+ + + H + + + E +E K N + E++S
Sbjct: 382 KIEEQREKVHENENIGTTEPGEHQEAKKAENSSNEEETSS 421
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 41.6 bits (96), Expect = 0.003
Identities = 67/327 (20%), Positives = 125/327 (38%), Gaps = 68/327 (20%)
Query: 417 ELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPA 476
E + + +R+ + + EQ E E + R ++ H E +
Sbjct: 157 EQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMRED--YSDKV 214
Query: 477 SDSHLQPVPPFGVPDFPQQPKSHY-----RKHLFSESNQDSST-SELSWTSNQKKKSLKS 530
SH PP + P+ + RK + E ++ S+L S+ ++K+ +
Sbjct: 215 KASHWSRSPP-------RPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSA 267
Query: 531 YSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQD 590
SS + SGSG E+++ E+E E+ +TS ++ E++ ++
Sbjct: 268 ESSSAE----------------SGSGSEEEE------EEEEEEEEEGSTSEESEEEEEEE 305
Query: 591 SFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLED 650
E++ +E S E+S + SEDEE+ N+ L
Sbjct: 306 EEE---EEETGSNSEEASEQSAEEVSEEEMSEDEERE---NENHLLV------------- 346
Query: 651 KDIPEGSFAK--SQQSRLEEEVASGSPFS--ITEERELPEGISTSSLEVVPE------NL 700
+PE F + + EEEV G+P S +TE +P+ + +E+ E L
Sbjct: 347 --VPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALLPIELKQELPKYLPAL 404
Query: 701 NGSAILPTFENFTKKRKRKYELRYRKR 727
G + F+ + + Y + YR +
Sbjct: 405 QGCRSVEEFQCLNRIEEGTYGVVYRAK 431
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 41.6 bits (96), Expect = 0.003
Identities = 67/327 (20%), Positives = 125/327 (38%), Gaps = 68/327 (20%)
Query: 417 ELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPA 476
E + + +R+ + + EQ E E + R ++ H E +
Sbjct: 167 EQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMRED--YSDKV 224
Query: 477 SDSHLQPVPPFGVPDFPQQPKSHY-----RKHLFSESNQDSST-SELSWTSNQKKKSLKS 530
SH PP + P+ + RK + E ++ S+L S+ ++K+ +
Sbjct: 225 KASHWSRSPP-------RPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSA 277
Query: 531 YSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQD 590
SS + SGSG E+++ E+E E+ +TS ++ E++ ++
Sbjct: 278 ESSSAE----------------SGSGSEEEE------EEEEEEEEEGSTSEESEEEEEEE 315
Query: 591 SFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLED 650
E++ +E S E+S + SEDEE+ N+ L
Sbjct: 316 EEE---EEETGSNSEEASEQSAEEVSEEEMSEDEERE---NENHLLV------------- 356
Query: 651 KDIPEGSFAK--SQQSRLEEEVASGSPFS--ITEERELPEGISTSSLEVVPE------NL 700
+PE F + + EEEV G+P S +TE +P+ + +E+ E L
Sbjct: 357 --VPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALLPIELKQELPKYLPAL 414
Query: 701 NGSAILPTFENFTKKRKRKYELRYRKR 727
G + F+ + + Y + YR +
Sbjct: 415 QGCRSVEEFQCLNRIEEGTYGVVYRAK 441
>gi|31657123 Hermansky-Pudlak syndrome 5 isoform a [Homo sapiens]
Length = 1129
Score = 41.2 bits (95), Expect = 0.004
Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 414 ISSELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAED--DRCLITLHLNDQ--SEP 469
ISS S+SD++ S E E+ +E T+ E ED D+C + H N+ S
Sbjct: 455 ISSRRGSQSDEDSCSLHSQTLSEDERFKEFTSQQE----EDLPDQCCGS-HGNEDNVSHA 509
Query: 470 PVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLK 529
PV+ E + + PFG+P + P L S S S + +K +L
Sbjct: 510 PVMFETDKN---ETFLPFGIPLPFRSPSP-----LVSLQAVKESVSSFVRKTTEKIGTL- 560
Query: 530 SYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQ 589
T +L++ P S E+D + P E++ E+ TSP E +FQ
Sbjct: 561 --------HTSPDLKVRPELRGDEQSC-EEDVSSDTCPKEEDTEEEKEVTSPPPEEDRFQ 611
Query: 590 DSFAFLTAEDSAQKTELQDPHSLSELSSLK--------HSEDEEKPKIVNQESLTESTSL 641
+ L + T+LQDP L E SL+ H E K + S T+++S+
Sbjct: 612 E----LKVATAEAMTKLQDPLVLFESESLRMVLQEWLSHLEKTFAMKDFSGVSDTDNSSM 667
Query: 642 K 642
K
Sbjct: 668 K 668
>gi|31657125 Hermansky-Pudlak syndrome 5 isoform b [Homo sapiens]
Length = 1015
Score = 41.2 bits (95), Expect = 0.004
Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 414 ISSELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAED--DRCLITLHLNDQ--SEP 469
ISS S+SD++ S E E+ +E T+ E ED D+C + H N+ S
Sbjct: 341 ISSRRGSQSDEDSCSLHSQTLSEDERFKEFTSQQE----EDLPDQCCGS-HGNEDNVSHA 395
Query: 470 PVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLK 529
PV+ E + + PFG+P + P L S S S + +K +L
Sbjct: 396 PVMFETDKN---ETFLPFGIPLPFRSPSP-----LVSLQAVKESVSSFVRKTTEKIGTL- 446
Query: 530 SYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQ 589
T +L++ P S E+D + P E++ E+ TSP E +FQ
Sbjct: 447 --------HTSPDLKVRPELRGDEQSC-EEDVSSDTCPKEEDTEEEKEVTSPPPEEDRFQ 497
Query: 590 DSFAFLTAEDSAQKTELQDPHSLSELSSLK--------HSEDEEKPKIVNQESLTESTSL 641
+ L + T+LQDP L E SL+ H E K + S T+++S+
Sbjct: 498 E----LKVATAEAMTKLQDPLVLFESESLRMVLQEWLSHLEKTFAMKDFSGVSDTDNSSM 553
Query: 642 K 642
K
Sbjct: 554 K 554
>gi|31657127 Hermansky-Pudlak syndrome 5 isoform b [Homo sapiens]
Length = 1015
Score = 41.2 bits (95), Expect = 0.004
Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 414 ISSELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAED--DRCLITLHLNDQ--SEP 469
ISS S+SD++ S E E+ +E T+ E ED D+C + H N+ S
Sbjct: 341 ISSRRGSQSDEDSCSLHSQTLSEDERFKEFTSQQE----EDLPDQCCGS-HGNEDNVSHA 395
Query: 470 PVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLK 529
PV+ E + + PFG+P + P L S S S + +K +L
Sbjct: 396 PVMFETDKN---ETFLPFGIPLPFRSPSP-----LVSLQAVKESVSSFVRKTTEKIGTL- 446
Query: 530 SYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQ 589
T +L++ P S E+D + P E++ E+ TSP E +FQ
Sbjct: 447 --------HTSPDLKVRPELRGDEQSC-EEDVSSDTCPKEEDTEEEKEVTSPPPEEDRFQ 497
Query: 590 DSFAFLTAEDSAQKTELQDPHSLSELSSLK--------HSEDEEKPKIVNQESLTESTSL 641
+ L + T+LQDP L E SL+ H E K + S T+++S+
Sbjct: 498 E----LKVATAEAMTKLQDPLVLFESESLRMVLQEWLSHLEKTFAMKDFSGVSDTDNSSM 553
Query: 642 K 642
K
Sbjct: 554 K 554
>gi|11225260 DNA topoisomerase I [Homo sapiens]
Length = 765
Score = 40.8 bits (94), Expect = 0.005
Identities = 51/261 (19%), Positives = 98/261 (37%), Gaps = 21/261 (8%)
Query: 501 RKHLFSESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKD 560
R+H E ++ + ++++ K S K + ++KT+ + ++
Sbjct: 31 REHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHKDKHKDRDKEKRK 90
Query: 561 QAKLLSPSEKEIPEQNN---TTSPKTSEQKFQDSFAFLTAEDSAQKTELQDPHSLSELSS 617
+ K+ + + +I ++ ++ P+ ++ D + ED +D
Sbjct: 91 EEKVRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPK 150
Query: 618 LKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDIPEGSFAKSQQSRLEEEVASGSPFS 677
+ED +K K E E LK +DK +PE K + + EE+ +
Sbjct: 151 KIKTEDTKKEKKRKLEE-EEDGKLKKPKNKDKDKKVPEPDNKKKKPKKEEEQ-----KWK 204
Query: 678 ITEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKA 737
EE PEGI LE G P +E + K Y+ + K S A++
Sbjct: 205 WWEEERYPEGIKWKFLE-----HKGPVFAPPYEPLPENVKFYYDGKVMKL---SPKAEEV 256
Query: 738 PDCLIKLLNQ----MQLFRLN 754
K+L+ ++FR N
Sbjct: 257 ATFFAKMLDHEYTTKEIFRKN 277
>gi|109637791 transcription factor-like nuclear regulator [Homo
sapiens]
Length = 2624
Score = 40.8 bits (94), Expect = 0.005
Identities = 64/291 (21%), Positives = 108/291 (37%), Gaps = 42/291 (14%)
Query: 468 EPPVIGEPASDSHLQPVPPFGVP--DF----PQQPKSHYRKHLFSESNQDSSTSELSWTS 521
E P +PA+DS +P P VP DF PQ+ N +S S T
Sbjct: 32 ESPRPPDPATDSASKPAEPTDVPTVDFGGAEPQEKAPRSSTEKTGGDNDVEESSRSSSTV 91
Query: 522 NQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSP 581
+Q++K + S SS K S++ + P S E Q S EK+ S
Sbjct: 92 SQRRKRISSTSSLVK----SSVSVPSESHPLSTINQEAPQPTATSTKEKQ------PCSD 141
Query: 582 KTSEQKFQDSFAFLTAEDSAQKTELQDPHSLSE-----------LSSLKHSEDEEKP--K 628
+ K Q L E +K + ++ ++++E + + + P
Sbjct: 142 RYRIYKAQKLREMLKEELRKEKKQWKNKYAINESQRPPDRSKMTMRDFIYYLPDNNPMTS 201
Query: 629 IVNQESLTESTSLKHKLRNLEDKDIPEGSFAKSQQSRLEEEVASGSPFSITEERELPEG- 687
+ QE TE S + R E K P ++ + +EEE G P + + +G
Sbjct: 202 SLEQEKKTEKPSTPVQTREQEGKSTP-----NAEDNEMEEETDDG-PLLVPRVKVAEDGS 255
Query: 688 --ISTSSLEVVPENLNGSAIL----PTFENFTKKRKRKYELRYRKRPFNSE 732
+ SL V G ++ P FE + + Y +P++++
Sbjct: 256 IILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYYSKPWSNK 306
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,584,254
Number of Sequences: 37866
Number of extensions: 1376258
Number of successful extensions: 5563
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 5274
Number of HSP's gapped (non-prelim): 536
length of query: 812
length of database: 18,247,518
effective HSP length: 111
effective length of query: 701
effective length of database: 14,044,392
effective search space: 9845118792
effective search space used: 9845118792
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.