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Search of human proteins with 89274169
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89274169 cytokine induced apoptosis inhibitor 1 [Homo
sapiens]
(312 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89274169 cytokine induced apoptosis inhibitor 1 [Homo sapiens] 618 e-177
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens] 34 0.19
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens] 34 0.19
gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens] 34 0.19
gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens] 34 0.19
gi|54792782 C-type lectin domain family 16, member A [Homo sapiens] 33 0.42
gi|239582759 Acr formation associated factor isoform 2 [Homo sap... 32 0.55
gi|66529203 hypothetical protein LOC57714 [Homo sapiens] 32 0.55
gi|164663805 methyltransferase like 7B [Homo sapiens] 32 0.95
gi|4501915 ADAM metallopeptidase domain 9 isoform 1 precursor [H... 31 1.6
gi|87299628 biorientation of chromosomes in cell division 1-like... 31 1.6
gi|89145417 methyltransferase like 7A [Homo sapiens] 31 1.6
gi|18780285 mucosal vascular addressin cell adhesion molecule 1 ... 30 2.1
gi|21361348 UTP14, U3 small nucleolar ribonucleoprotein, homolog... 30 2.1
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 30 2.1
gi|189163495 ataxin 3 isoform 4 [Homo sapiens] 30 2.8
gi|22748823 Bardet-Biedl syndrome 5 [Homo sapiens] 30 2.8
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens] 30 2.8
gi|221136814 coiled-coil domain containing 154 [Homo sapiens] 29 4.7
gi|30023820 hypothetical protein LOC162427 [Homo sapiens] 29 6.1
gi|134142826 pericentriolar material 1 [Homo sapiens] 29 6.1
gi|194239731 eukaryotic translation elongation factor 1 delta is... 29 6.1
gi|194239727 eukaryotic translation elongation factor 1 delta is... 29 6.1
gi|194239725 eukaryotic translation elongation factor 1 delta is... 29 6.1
gi|194239723 eukaryotic translation elongation factor 1 delta is... 29 6.1
gi|25453472 eukaryotic translation elongation factor 1 delta iso... 29 6.1
gi|25453474 eukaryotic translation elongation factor 1 delta iso... 29 6.1
gi|194239729 eukaryotic translation elongation factor 1 delta is... 29 6.1
gi|110735439 Werner syndrome protein [Homo sapiens] 28 8.0
gi|169218196 PREDICTED: similar to Werner syndrome ATP-dependent... 28 8.0
>gi|89274169 cytokine induced apoptosis inhibitor 1 [Homo sapiens]
Length = 312
Score = 618 bits (1593), Expect = e-177
Identities = 312/312 (100%), Positives = 312/312 (100%)
Query: 1 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF 60
MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF
Sbjct: 1 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF 60
Query: 61 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT 120
DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT
Sbjct: 61 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT 120
Query: 121 LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK 180
LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK
Sbjct: 121 LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK 180
Query: 181 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG 240
KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG
Sbjct: 181 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG 240
Query: 241 KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGE 300
KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGE
Sbjct: 241 KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGE 300
Query: 301 KVLLSDSNLHDA 312
KVLLSDSNLHDA
Sbjct: 301 KVLLSDSNLHDA 312
>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
Length = 1863
Score = 33.9 bits (76), Expect = 0.19
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 16/237 (6%)
Query: 43 SVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETA 102
SV K+ L + + SS + + + V S L +A+ L+P G +P ET
Sbjct: 983 SVLGGKKKLPAENGSSSAETLNAKAVESSKPLSNAQPSGP----LKPVGNA---KPAETL 1035
Query: 103 --VDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 160
+ N +T + +A L + + + +V R H G +DN +
Sbjct: 1036 KPMGNAKPAETLKPMGNAKPDENLKSASKEELKKDVKNDVNCKRGHAG-TTDNEKRSESQ 1094
Query: 161 GKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLD 220
G P F+ + + ++ KK + + DP A +WTL+ ++ ++ + L
Sbjct: 1095 GTAPAFKQ-KLQDVHVAEGKKLLLQCQVSSDPPATIIWTLNGKTLKTTKFIILSQEGSLC 1153
Query: 221 PEDLKKPDPASLRAASCGEGKKRKACKNCTCGL----AEELEKEKSREQMSSQPKSA 273
++K P C K C+C + A E K+ E S +PKS+
Sbjct: 1154 SVSIEKALPEDRGLYKC-VAKNDAGQAECSCQVTVDDAPASENTKAPEMKSRRPKSS 1209
>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
Length = 1914
Score = 33.9 bits (76), Expect = 0.19
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 16/237 (6%)
Query: 43 SVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETA 102
SV K+ L + + SS + + + V S L +A+ L+P G +P ET
Sbjct: 983 SVLGGKKKLPAENGSSSAETLNAKAVESSKPLSNAQPSGP----LKPVGNA---KPAETL 1035
Query: 103 --VDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 160
+ N +T + +A L + + + +V R H G +DN +
Sbjct: 1036 KPMGNAKPAETLKPMGNAKPDENLKSASKEELKKDVKNDVNCKRGHAG-TTDNEKRSESQ 1094
Query: 161 GKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLD 220
G P F+ + + ++ KK + + DP A +WTL+ ++ ++ + L
Sbjct: 1095 GTAPAFKQ-KLQDVHVAEGKKLLLQCQVSSDPPATIIWTLNGKTLKTTKFIILSQEGSLC 1153
Query: 221 PEDLKKPDPASLRAASCGEGKKRKACKNCTCGL----AEELEKEKSREQMSSQPKSA 273
++K P C K C+C + A E K+ E S +PKS+
Sbjct: 1154 SVSIEKALPEDRGLYKC-VAKNDAGQAECSCQVTVDDAPASENTKAPEMKSRRPKSS 1209
>gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]
Length = 1794
Score = 33.9 bits (76), Expect = 0.19
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 16/237 (6%)
Query: 43 SVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETA 102
SV K+ L + + SS + + + V S L +A+ L+P G +P ET
Sbjct: 914 SVLGGKKKLPAENGSSSAETLNAKAVESSKPLSNAQPSGP----LKPVGNA---KPAETL 966
Query: 103 --VDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 160
+ N +T + +A L + + + +V R H G +DN +
Sbjct: 967 KPMGNAKPAETLKPMGNAKPDENLKSASKEELKKDVKNDVNCKRGHAG-TTDNEKRSESQ 1025
Query: 161 GKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLD 220
G P F+ + + ++ KK + + DP A +WTL+ ++ ++ + L
Sbjct: 1026 GTAPAFKQ-KLQDVHVAEGKKLLLQCQVSSDPPATIIWTLNGKTLKTTKFIILSQEGSLC 1084
Query: 221 PEDLKKPDPASLRAASCGEGKKRKACKNCTCGL----AEELEKEKSREQMSSQPKSA 273
++K P C K C+C + A E K+ E S +PKS+
Sbjct: 1085 SVSIEKALPEDRGLYKC-VAKNDAGQAECSCQVTVDDAPASENTKAPEMKSRRPKSS 1140
>gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]
Length = 1845
Score = 33.9 bits (76), Expect = 0.19
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 16/237 (6%)
Query: 43 SVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETA 102
SV K+ L + + SS + + + V S L +A+ L+P G +P ET
Sbjct: 914 SVLGGKKKLPAENGSSSAETLNAKAVESSKPLSNAQPSGP----LKPVGNA---KPAETL 966
Query: 103 --VDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 160
+ N +T + +A L + + + +V R H G +DN +
Sbjct: 967 KPMGNAKPAETLKPMGNAKPDENLKSASKEELKKDVKNDVNCKRGHAG-TTDNEKRSESQ 1025
Query: 161 GKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLD 220
G P F+ + + ++ KK + + DP A +WTL+ ++ ++ + L
Sbjct: 1026 GTAPAFKQ-KLQDVHVAEGKKLLLQCQVSSDPPATIIWTLNGKTLKTTKFIILSQEGSLC 1084
Query: 221 PEDLKKPDPASLRAASCGEGKKRKACKNCTCGL----AEELEKEKSREQMSSQPKSA 273
++K P C K C+C + A E K+ E S +PKS+
Sbjct: 1085 SVSIEKALPEDRGLYKC-VAKNDAGQAECSCQVTVDDAPASENTKAPEMKSRRPKSS 1140
>gi|54792782 C-type lectin domain family 16, member A [Homo sapiens]
Length = 1053
Score = 32.7 bits (73), Expect = 0.42
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 149 HESDNLLFVQIT--GKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDME 206
H D L+ V T KP+ V S ++ T SPS+ PA P + L +A+ +
Sbjct: 947 HLPDQLVIVNETEADSKPSKNVARSAAVE---TASLSPSLVPARQPTISLLCEDTADTLS 1003
Query: 207 DDSMDLIDSDELLDPEDLKK---PDPASLRAASCGEGKKRKACKNCTCGLAEE 256
+S+ L+ +DP L+ P S AA+C E +A G AE+
Sbjct: 1004 VESLTLVPP---VDPHSLRSLTGMPPLSTPAAACTEPVGEEAACAEPVGTAED 1053
>gi|239582759 Acr formation associated factor isoform 2 [Homo
sapiens]
Length = 265
Score = 32.3 bits (72), Expect = 0.55
Identities = 28/129 (21%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 93 LFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESD 152
LF+ P ++ +++ T L + L L+ V +E + E TP + ++ + D
Sbjct: 5 LFIFIPGVFSLKSSTLKPTIEALPNVLPLNEDVNKQEEKNEDHTPNYAPANEKNGNYYKD 64
Query: 153 NLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDL 212
+V T + PN G+ ++ + T + ++K P WT+ A + ++ +
Sbjct: 65 IKQYV-FTTQNPN---GTESEISVRATTDLNFALKNGSTPNVPAFWTMLAKAINGTAVVM 120
Query: 213 IDSDELLDP 221
D D+L P
Sbjct: 121 DDKDQLFHP 129
>gi|66529203 hypothetical protein LOC57714 [Homo sapiens]
Length = 1063
Score = 32.3 bits (72), Expect = 0.55
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 124 LVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK-KS 182
L E K EP T E+Q+ + G + + V + N G+ +++K + K
Sbjct: 243 LPESKGGSSEPGT--ELQTTEQQAGASAS--MAVDAVAEPANAVKGAGKEMKEKTQRMKQ 298
Query: 183 SPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKK 242
P+ P + T + ++M + + + +E +PEDLKKP+ + AA+ K+
Sbjct: 299 PPATTPPFKTHCQEAETKTKDEMAA-AEEKVGKNEQGEPEDLKKPEGKNRSAAAVKNEKE 357
Query: 243 RK 244
+K
Sbjct: 358 QK 359
>gi|164663805 methyltransferase like 7B [Homo sapiens]
Length = 244
Score = 31.6 bits (70), Expect = 0.95
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 45 ENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 99
E+++QL + S D+++ LV S ++L E+ R+LRPGG LF E V
Sbjct: 128 EDMRQLA-----DGSMDVVVCTLVLCSVQ-SPRKVLQEVRRVLRPGGVLFFWEHV 176
>gi|4501915 ADAM metallopeptidase domain 9 isoform 1 precursor [Homo
sapiens]
Length = 819
Score = 30.8 bits (68), Expect = 1.6
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 223 DLKKPDPASLRAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDA 282
++ KPD A A SCG K A + C CG +E E + E + + KS C GD
Sbjct: 404 NIPKPDEA-YSAPSCGN-KLVDAGEECDCGTPKECELDPCCEGSTCKLKS-FAECAYGDC 460
Query: 283 FRCASCPYL 291
C C +L
Sbjct: 461 --CKDCRFL 467
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 30.8 bits (68), Expect = 1.6
Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 22/160 (13%)
Query: 127 VKELQREPLTPEEVQSVR-------EHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSIT 179
+ ELQREPL E +V E + ES N + +G+K N E S ++
Sbjct: 2701 IAELQREPLLVNESLNVENSGFRTNEEIHSESYNKGEIS-SGRKDNAEAISGHSVEAD-- 2757
Query: 180 KKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSD--------ELLDPEDLKKPDPAS 231
K + + K LS+ D DD+ D++DS +P D K+ +
Sbjct: 2758 PKEVEEEERHMPKRKRKQHYLSSEDEPDDNPDVLDSRIETAQRQCPETEPHDTKEENSRD 2817
Query: 232 LRAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQPK 271
L K + T + EE ++ S E +P+
Sbjct: 2818 LEELP----KTSSETNSTTSRVMEEKDEYSSSETTGEKPE 2853
>gi|89145417 methyltransferase like 7A [Homo sapiens]
Length = 244
Score = 30.8 bits (68), Expect = 1.6
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 57 ESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 99
+ S D+++ LV S + IL E+ R+LRPGG + E V
Sbjct: 135 DGSVDVVVCTLVLCSVK-NQERILREVCRVLRPGGAFYFMEHV 176
>gi|18780285 mucosal vascular addressin cell adhesion molecule 1
isoform b precursor [Homo sapiens]
Length = 295
Score = 30.4 bits (67), Expect = 2.1
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 126 EVKELQREPLTPEEVQ-SVREH-----LGHESDNLLFVQITGKKPNFEVGSSRQLKLSIT 179
EV+E + EP E+V V E LG L+ Q T + P E+
Sbjct: 167 EVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLELSH--------- 217
Query: 180 KKSSPSVKPAVDPAAAKLWTLSA 202
+++ P+ KPA D A LWT SA
Sbjct: 218 RQAIPASKPAGDQLPAALWTSSA 240
>gi|21361348 UTP14, U3 small nucleolar ribonucleoprotein, homolog A
[Homo sapiens]
Length = 771
Score = 30.4 bits (67), Expect = 2.1
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 11/166 (6%)
Query: 109 VKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEV 168
VKT+S L + V+ K+ PL EE++ + + Q+ K V
Sbjct: 94 VKTSSSLATVKKQLSRVKSKKTVELPLNKEEIERIHREVAFNKT----AQVLSKWDPV-V 148
Query: 169 GSSRQLKLSI--TKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKK 226
+RQ + + +K P++ P + W + +E + +L+ ++ + L
Sbjct: 149 LKNRQAEQLVFPLEKEEPAIAPIEHVLSG--WK-ARTPLEQEIFNLLHKNKQPVTDPLLT 205
Query: 227 P-DPASLRAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQPK 271
P + ASLRA S E K R+A L E + RE+ K
Sbjct: 206 PVEKASLRAMSLEEAKMRRAELQRARALQSYYEAKARREKKIKSKK 251
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 30.4 bits (67), Expect = 2.1
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 126 EVKELQREPLTPEEVQSVREH--LGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSS 183
E++E + EP+ P V+++ EH L E + + P S L S T+K+S
Sbjct: 607 ELQEQEGEPVPPSNVEAIAEHAVLSEEENE----EFEAYSPAAAPTSESSLSPSTTEKTS 662
Query: 184 PSVKPAVDPAAAKLWTLSANDMEDDSMDLIDS 215
+ P + LS ++ + DS
Sbjct: 663 ENQSPLFSTVTPEYMVLSGDEASESGCYTPDS 694
>gi|189163495 ataxin 3 isoform 4 [Homo sapiens]
Length = 295
Score = 30.0 bits (66), Expect = 2.8
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 23/135 (17%)
Query: 20 SPVE--ALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSA 77
SPVE ++ +D+ + + EG V+ E+ + LQ + L+ L+ G +
Sbjct: 29 SPVELSSIAHQLDEEERMRMAEGGVTSEDYRTFLQWFN--------LNSLLTGPELISDT 80
Query: 78 EILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTP 137
+ +A++ + G +F+ VK C A L ++ V+++ R L
Sbjct: 81 YLALFLAQLQQEGYSIFV-------------VKGDLPDCEADQLLQMIRVQQMHRPKLIG 127
Query: 138 EEVQSVREHLGHESD 152
EE+ ++E H++D
Sbjct: 128 EELAQLKEQRVHKTD 142
>gi|22748823 Bardet-Biedl syndrome 5 [Homo sapiens]
Length = 341
Score = 30.0 bits (66), Expect = 2.8
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 37 GNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAE--ILAEIARILRPGGCL- 93
GN G + N++ ++ A+ SF++ + L S + ++ + I + GG +
Sbjct: 175 GNLGTFFITNVR-IVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIESSQQSGGYVL 233
Query: 94 -FLKEPVETAVDNNSKVKTASKLCSALTLSGL---VEVKELQREPLTPEEVQSVRE--HL 147
F +PVE ++ ++ + K+ SA + G+ +E K E LT E++Q E
Sbjct: 234 GFKIDPVEKLQESVKEINSLHKVYSASPIFGVDYEMEEKPQPLEALTVEQIQDDVEIDSD 293
Query: 148 GHESDNLLFVQITGKKPNFEVGSSRQLKLSITK 180
GH + + K+ + E S +L L+I K
Sbjct: 294 GHTDAFVAYFADGNKQQDREPVFSEELGLAIEK 326
>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
Length = 1834
Score = 30.0 bits (66), Expect = 2.8
Identities = 44/196 (22%), Positives = 71/196 (36%), Gaps = 27/196 (13%)
Query: 89 PGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEV-KELQREPLTPEEVQSVREHL 147
P C FL P + S + S L + + G +V P P + + R L
Sbjct: 1030 PHPCRFLLGPPQGGSPRGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPSKQKRDRSIL 1089
Query: 148 GHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSS---PSVKPAVD--------PAAAK 196
K+P + G R+ L K P P++D ++
Sbjct: 1090 -----------TLSKEPGHQKGKERRSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSRS 1138
Query: 197 LWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGLAEE 256
+ S + ED+ + L+DSDE L+ E K +S E KK +C L
Sbjct: 1139 QKSSSKLNEEDEVILLLDSDEELELEQTKMKSISS----DPLEEKKALEISPRSCELFSI 1194
Query: 257 LEKEKSREQMSSQPKS 272
++ + +E S P+S
Sbjct: 1195 IDVDADQEPSQSPPRS 1210
>gi|221136814 coiled-coil domain containing 154 [Homo sapiens]
Length = 667
Score = 29.3 bits (64), Expect = 4.7
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 137 PEEVQSVREH-LGHESDNLLFVQITGKKPNFEVGSSRQ 173
P++++SV + L H+SD+ L + GK F+VG+ RQ
Sbjct: 468 PQQIESVSDKCLLHKSDSDLRISAEGKAREFKVGALRQ 505
>gi|30023820 hypothetical protein LOC162427 [Homo sapiens]
Length = 466
Score = 28.9 bits (63), Expect = 6.1
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 173 QLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASL 232
QL LS + PS PA L + S+ D++ D+ D ELLD +L + DPAS
Sbjct: 407 QLALSGASQPGPSGAPAQRATRGFLRSPSS-DLDTDAEG--DDFELLDQSELSQLDPASS 463
Query: 233 RA 234
R+
Sbjct: 464 RS 465
>gi|134142826 pericentriolar material 1 [Homo sapiens]
Length = 2024
Score = 28.9 bits (63), Expect = 6.1
Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 27/167 (16%)
Query: 122 SGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKK 181
S + ++ + + L EEV+S R +E + + +KP + G S +S+ K
Sbjct: 1186 SSSIGAEKPRNKKLPEEEVESSRTPWLYEQEGEV------EKPFIKTGFS----VSVEKS 1235
Query: 182 SSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGK 241
+S + K +D + +++S++ S PDP + K
Sbjct: 1236 TSSNRKNQLDTNGRR------RQFDEESLESFSS----------MPDPVDPTTVT-KTFK 1278
Query: 242 KRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASC 288
RKA + ++ K KS+++ S+Q KS N A ++C
Sbjct: 1279 TRKASAQASLASKDKTPKSKSKKRNSTQLKSRVKNIRYESASMSSTC 1325
>gi|194239731 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
Length = 281
Score = 28.9 bits (63), Expect = 6.1
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
S + +L++ +KSSP V P V+P A K T A D EDD +DL SD
Sbjct: 106 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 164
Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
+ ED + R E K +K
Sbjct: 165 --EEEDKEAAQLREERLRQYAEKKAKK 189
>gi|194239727 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
Length = 281
Score = 28.9 bits (63), Expect = 6.1
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
S + +L++ +KSSP V P V+P A K T A D EDD +DL SD
Sbjct: 106 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 164
Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
+ ED + R E K +K
Sbjct: 165 --EEEDKEAAQLREERLRQYAEKKAKK 189
>gi|194239725 eukaryotic translation elongation factor 1 delta
isoform 3 [Homo sapiens]
Length = 646
Score = 28.9 bits (63), Expect = 6.1
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
S + +L++ +KSSP V P V+P A K T A D EDD +DL SD
Sbjct: 471 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 529
Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
+ ED + R E K +K
Sbjct: 530 --EEEDKEAAQLREERLRQYAEKKAKK 554
>gi|194239723 eukaryotic translation elongation factor 1 delta
isoform 1 [Homo sapiens]
Length = 647
Score = 28.9 bits (63), Expect = 6.1
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
S + +L++ +KSSP V P V+P A K T A D EDD +DL SD
Sbjct: 472 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 530
Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
+ ED + R E K +K
Sbjct: 531 --EEEDKEAAQLREERLRQYAEKKAKK 555
>gi|25453472 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
Length = 281
Score = 28.9 bits (63), Expect = 6.1
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
S + +L++ +KSSP V P V+P A K T A D EDD +DL SD
Sbjct: 106 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 164
Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
+ ED + R E K +K
Sbjct: 165 --EEEDKEAAQLREERLRQYAEKKAKK 189
>gi|25453474 eukaryotic translation elongation factor 1 delta
isoform 1 [Homo sapiens]
Length = 647
Score = 28.9 bits (63), Expect = 6.1
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
S + +L++ +KSSP V P V+P A K T A D EDD +DL SD
Sbjct: 472 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 530
Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
+ ED + R E K +K
Sbjct: 531 --EEEDKEAAQLREERLRQYAEKKAKK 555
>gi|194239729 eukaryotic translation elongation factor 1 delta
isoform 4 [Homo sapiens]
Length = 257
Score = 28.9 bits (63), Expect = 6.1
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
S + +L++ +KSSP V P V+P A K T A D EDD +DL SD
Sbjct: 82 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 140
Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
+ ED + R E K +K
Sbjct: 141 --EEEDKEAAQLREERLRQYAEKKAKK 165
>gi|110735439 Werner syndrome protein [Homo sapiens]
Length = 1432
Score = 28.5 bits (62), Expect = 8.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 200 LSANDMEDDSMDLIDSDELLDPEDLKKPDP 229
LS ND E+D+ +I+SDE L+ E LK P
Sbjct: 425 LSPNDNENDTSYVIESDEDLEMEMLKHLSP 454
Score = 28.5 bits (62), Expect = 8.0
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 200 LSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGLAEELEK 259
LS ND E+D+ +I+SDE L+ E LK + + K K +N EE E
Sbjct: 452 LSPNDNENDTSYVIESDEDLEMEMLKSLENLNSGTVEPTHSKCLKMERNLGLPTKEEEED 511
Query: 260 EKS 262
+++
Sbjct: 512 DEN 514
>gi|169218196 PREDICTED: similar to Werner syndrome ATP-dependent
helicase, partial [Homo sapiens]
Length = 1140
Score = 28.5 bits (62), Expect = 8.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 200 LSANDMEDDSMDLIDSDELLDPEDLKKPDP 229
LS ND E+D+ +I+SDE L+ E LK P
Sbjct: 133 LSPNDNENDTSYVIESDEDLEMEMLKHLSP 162
Score = 28.5 bits (62), Expect = 8.0
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 200 LSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGLAEELEK 259
LS ND E+D+ +I+SDE L+ E LK + + K K +N EE E
Sbjct: 160 LSPNDNENDTSYVIESDEDLEMEMLKSLENLNSGTVEPTHSKCLKMERNLGLPTKEEEED 219
Query: 260 EKS 262
+++
Sbjct: 220 DEN 222
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,426,338
Number of Sequences: 37866
Number of extensions: 549982
Number of successful extensions: 1579
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1565
Number of HSP's gapped (non-prelim): 50
length of query: 312
length of database: 18,247,518
effective HSP length: 102
effective length of query: 210
effective length of database: 14,385,186
effective search space: 3020889060
effective search space used: 3020889060
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.