FAM48A 37047

Name: FAM48A	Sequence: fasta or formatted (733aa)		NCBI GI: 8923735
Description: family with sequence similarity 48, member A isoform b		Not currently referenced in the text
Other entries for this name: alt prot {779aa} family with sequence similarity 48, member A isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 47 3 C cysteine 2.3 17 1 D aspartate 3.8 28 2 E glutamate 5.3 39 2 F phenylalanine 1.8 13 1 G glycine 5.6 41 2 H histidine 1.5 11 1 I isoleucine 3.7 27 2 K lysine 6.1 45 2 L leucine 10.4 76 3 M methionine 2.2 16 1 N asparagine 4.5 33 1 P proline 7.1 52 4 Q glutamine 8.3 61 6 R arginine 4.0 29 2 S serine 13.2 97 4 T threonine 4.9 36 2 V valine 5.3 39 2 W tryptophan 0.5 4 1 Y tyrosine 3.0 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 family with sequence similarity 48, member A isoform ... FAM48A 0.958 family with sequence similarity 48, member A isoform... FAM48B1 0.475 hypothetical protein LOC100130302 FAM48B2 0.472 family with sequence similarity 48, member B2 [Homo... LOC100294444 0.417 PREDICTED: similar to family with sequence similari... ZFHX3 0.014 AT-binding transcription factor 1 TNRC18 0.014 trinucleotide repeat containing 18 MUC6 0.013 mucin 6, gastric ZNF532 0.013 zinc finger protein 532 MEF2A 0.013 myocyte enhancer factor 2A isoform 4 MEF2A 0.013 myocyte enhancer factor 2A isoform 2 MEF2A 0.013 myocyte enhancer factor 2A isoform 1 NFAT5 0.013 nuclear factor of activated T-cells 5 isoform a [Hom... NFAT5 0.013 nuclear factor of activated T-cells 5 isoform c [Homo... NFAT5 0.013 nuclear factor of activated T-cells 5 isoform d [Ho... NFAT5 0.013 nuclear factor of activated T-cells 5 isoform b [Ho... NFAT5 0.013 nuclear factor of activated T-cells 5 isoform a [Hom... EP400 0.012 E1A binding protein p400 DOT1L 0.012 DOT1-like, histone H3 methyltransferase MUC5AC 0.012 mucin 5AC CREBBP 0.012 CREB binding protein isoform b CREBBP 0.012 CREB binding protein isoform a MUC5B 0.012 mucin 5, subtype B, tracheobronchial BCL9 0.012 B-cell CLL/lymphoma 9 POU2F1 0.011 POU class 2 homeobox 1 MED15 0.010 mediator complex subunit 15 isoform b MUC17 0.010 mucin 17 MUC3B 0.010 PREDICTED: mucin 3B, cell surface associated, parti... MEF2D 0.010 myocyte enhancer factor 2D HCFC1 0.010 host cell factor 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.