Guide to the Human Genome
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Name: ZC4H2 Sequence: fasta or formatted (224aa) NCBI GI: 8923720
Description:

zinc finger, C4H2 domain containing

Referenced in:

Liver

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         20           7
 C cysteine            2.7          6           1
 D aspartate           4.5         10           1
 E glutamate          13.4         30           4
 F phenylalanine       1.3          3           1
 G glycine             0.4          1           1
 H histidine           3.1          7           1
 I isoleucine          4.5         10           1
 K lysine             10.7         24           2
 L leucine            11.6         26           3
 M methionine          3.6          8           1
 N asparagine          3.1          7           1
 P proline             5.8         13           3
 Q glutamine           8.5         19           2
 R arginine            6.7         15           2
 S serine              4.0          9           1
 T threonine           3.6          8           1
 V valine              1.8          4           1
 W tryptophan          0.4          1           1
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, C4H2 domain containing 
PNN                   0.057   pinin, desmosome associated protein 
TPR                   0.050   nuclear pore complex-associated protein TPR 
CENPE                 0.050   centromere protein E 
ERC1                  0.047   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.047   RAB6-interacting protein 2 isoform delta 
C6orf97               0.047   hypothetical protein LOC80129 
MYH7                  0.045   myosin, heavy chain 7, cardiac muscle, beta 
PPFIA2                0.045   PTPRF interacting protein alpha 2 
CTAGE5                0.042   CTAGE family, member 5 isoform 3 
CTAGE5                0.042   CTAGE family, member 5 isoform 1 
CTAGE5                0.042   CTAGE family, member 5 isoform 4 
CTAGE5                0.042   CTAGE family, member 5 isoform 2 
RALBP1                0.040   ralA binding protein 1 
EEA1                  0.040   early endosome antigen 1, 162kD 
FILIP1                0.040   filamin A interacting protein 1 
SCAPER                0.040   S-phase cyclin A-associated protein in the ER isofo...
SCAPER                0.040   S-phase cyclin A-associated protein in the ER isofo...
HOOK3                 0.040   golgi-associated microtubule-binding protein HOOK3 [...
LOC100133220          0.040   PREDICTED: hypothetical protein 
GOLGA4                0.040   golgi autoantigen, golgin subfamily a, 4 
CEP250                0.038   centrosomal protein 2 
MYH6                  0.038   myosin heavy chain 6 
EPS15                 0.038   epidermal growth factor receptor pathway substrate ...
EPS15                 0.038   epidermal growth factor receptor pathway substrate 15...
LOC440243             0.038   PREDICTED: Putative golgin subfamily A member 6-lik...
MYH2                  0.038   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.038   myosin, heavy chain 2, skeletal muscle, adult [Homo...
LOC645202             0.035   PREDICTED: hypothetical protein LOC645202 
MYH1                  0.035   myosin, heavy chain 1, skeletal muscle, adult [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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