Guide to the Human Genome
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Name: EPS15 Sequence: fasta or formatted (582aa) NCBI GI: 229577185
Description:

epidermal growth factor receptor pathway substrate 15 isoform B

Referenced in:

Epidermal Growth Factor
Additional Membrane Functions
Additional Interaction Domain Families

Other entries for this name:
alt prot [896aa] epidermal growth factor receptor pathway substrate 15 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         37           2
 C cysteine            1.5          9           1
 D aspartate           7.2         42           2
 E glutamate          11.5         67           3
 F phenylalanine       4.8         28           2
 G glycine             3.8         22           3
 H histidine           1.2          7           1
 I isoleucine          3.1         18           1
 K lysine              6.0         35           2
 L leucine             7.7         45           2
 M methionine          1.0          6           1
 N asparagine          5.3         31           2
 P proline             6.9         40           2
 Q glutamine           6.2         36           2
 R arginine            2.7         16           1
 S serine             12.4         72           3
 T threonine           5.8         34           4
 V valine              4.8         28           2
 W tryptophan          0.7          4           1
 Y tyrosine            0.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epidermal growth factor receptor pathway substrate ... 
EPS15                 0.941   epidermal growth factor receptor pathway substrate 15...
EPS15L1               0.224   epidermal growth factor receptor pathway substrate 1...
CENPE                 0.042   centromere protein E 
CEP110                0.040   centrosomal protein 110kDa 
ERC1                  0.038   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.038   RAB6-interacting protein 2 isoform delta 
LOC283767             0.035   golgi autoantigen, golgin subfamily a-like 
DCTN1                 0.035   dynactin 1 isoform 4 
DCTN1                 0.035   dynactin 1 isoform 3 
DCTN1                 0.035   dynactin 1 isoform 2 
DCTN1                 0.035   dynactin 1 isoform 1 
MYH9                  0.034   myosin, heavy polypeptide 9, non-muscle 
LOC100133758          0.034   PREDICTED: hypothetical protein, partial 
LOC400352             0.034   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.034   PREDICTED: similar to Putative golgin subfamily A m...
DEF6                  0.034   differentially expressed in FDCP 6 homolog 
FYCO1                 0.034   FYVE and coiled-coil domain containing 1 
CTTNBP2NL             0.033   CTTNBP2 N-terminal like 
LOC727832             0.033   golgi autoantigen, golgin subfamily a-like 
LOC645202             0.032   PREDICTED: hypothetical protein LOC645202 
MYH10                 0.032   myosin, heavy polypeptide 10, non-muscle 
LOC440243             0.031   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283685             0.031   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYH1                  0.031   myosin, heavy chain 1, skeletal muscle, adult [Homo...
GOLGA3                0.031   Golgi autoantigen, golgin subfamily a, 3 
GCC2                  0.030   GRIP and coiled-coil domain-containing 2 
EEA1                  0.030   early endosome antigen 1, 162kD 
MYO18A                0.030   myosin 18A isoform b 
MYO18A                0.030   myosin 18A isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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