Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 14150108
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo
sapiens]
(162 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo sap... 324 2e-89
gi|221316729 EF-hand calcium binding domain 2 isoform b [Homo sa... 249 7e-67
gi|58218968 calmodulin 3 [Homo sapiens] 96 1e-20
gi|4502549 calmodulin 2 [Homo sapiens] 96 1e-20
gi|5901912 calmodulin 1 [Homo sapiens] 96 1e-20
gi|4885111 calmodulin-like 3 [Homo sapiens] 96 2e-20
gi|4757974 centrin 1 [Homo sapiens] 80 8e-16
gi|4757902 caltractin [Homo sapiens] 79 1e-15
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 79 1e-15
gi|46397403 centrin 3 [Homo sapiens] 73 1e-13
gi|223278387 calmodulin-like 5 [Homo sapiens] 71 5e-13
gi|50897266 calmodulin-like 6 [Homo sapiens] 70 1e-12
gi|29568111 myosin regulatory light chain 9 isoform a [Homo sapi... 66 1e-11
gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f... 64 6e-11
gi|4507615 troponin C, slow [Homo sapiens] 64 7e-11
gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f... 63 1e-10
gi|4505303 smooth muscle and non-muscle myosin alkali light chai... 62 2e-10
gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo... 60 8e-10
gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo s... 60 8e-10
gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo... 60 8e-10
gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo... 60 8e-10
gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo ... 60 8e-10
gi|11067753 calcium binding protein 5 [Homo sapiens] 60 1e-09
gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric [... 59 1e-09
gi|28372499 myosin light chain, phosphorylatable, fast skeletal ... 58 4e-09
gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens] 58 4e-09
gi|88999583 myosin, light chain 6, alkali, smooth muscle and non... 57 7e-09
gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens] 57 7e-09
gi|21624641 calcium binding protein 4 [Homo sapiens] 56 2e-08
gi|169167243 PREDICTED: similar to myosin regulatory light chain... 55 3e-08
>gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo
sapiens]
Length = 162
Score = 324 bits (830), Expect = 2e-89
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA
Sbjct: 1 MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
Query: 61 EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY
Sbjct: 61 EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
Query: 121 MTEEGEPFSQEEMEEMLSAAIDPESNSINYKDYITMMVIDEN 162
MTEEGEPFSQEEMEEMLSAAIDPESNSINYKDYITMMVIDEN
Sbjct: 121 MTEEGEPFSQEEMEEMLSAAIDPESNSINYKDYITMMVIDEN 162
>gi|221316729 EF-hand calcium binding domain 2 isoform b [Homo
sapiens]
Length = 133
Score = 249 bits (636), Expect = 7e-67
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 1 MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA
Sbjct: 1 MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
Query: 61 EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY
Sbjct: 61 EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
Query: 121 MTEE 124
MTEE
Sbjct: 121 MTEE 124
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 95.9 bits (237), Expect = 1e-20
Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 1 MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
MAD+ E+I AEF KEAF +FD + + T+ +E+GT++RSLG PTE EL D+I
Sbjct: 1 MADQLTEEQI--AEF----KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 54
Query: 61 EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
EV + + G I F +FL +M + + E+ + AF V D G+++ EL
Sbjct: 55 EV-DADGNGTIDFPEFLTMMARKMKDTD----SEEEIREAFRVFDKDGNGYISAAELRHV 109
Query: 121 MTEEGEPFSQEEMEEMLSAAIDPESNSINYKDYITMM 157
MT GE + EE++EM+ A +NY++++ MM
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 95.9 bits (237), Expect = 1e-20
Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 1 MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
MAD+ E+I AEF KEAF +FD + + T+ +E+GT++RSLG PTE EL D+I
Sbjct: 1 MADQLTEEQI--AEF----KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 54
Query: 61 EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
EV + + G I F +FL +M + + E+ + AF V D G+++ EL
Sbjct: 55 EV-DADGNGTIDFPEFLTMMARKMKDTD----SEEEIREAFRVFDKDGNGYISAAELRHV 109
Query: 121 MTEEGEPFSQEEMEEMLSAAIDPESNSINYKDYITMM 157
MT GE + EE++EM+ A +NY++++ MM
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 95.9 bits (237), Expect = 1e-20
Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 1 MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
MAD+ E+I AEF KEAF +FD + + T+ +E+GT++RSLG PTE EL D+I
Sbjct: 1 MADQLTEEQI--AEF----KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 54
Query: 61 EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
EV + + G I F +FL +M + + E+ + AF V D G+++ EL
Sbjct: 55 EV-DADGNGTIDFPEFLTMMARKMKDTD----SEEEIREAFRVFDKDGNGYISAAELRHV 109
Query: 121 MTEEGEPFSQEEMEEMLSAAIDPESNSINYKDYITMM 157
MT GE + EE++EM+ A +NY++++ MM
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 95.5 bits (236), Expect = 2e-20
Identities = 56/158 (35%), Positives = 90/158 (56%), Gaps = 11/158 (6%)
Query: 1 MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
MAD+ E+ V EF KEAF +FD + + + RE+GT++RSLG PTE EL D+++
Sbjct: 1 MADQLTEEQ--VTEF----KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMS 54
Query: 61 EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
E+ + + G + F +FL +M + + E+ + AF V D GF++ EL
Sbjct: 55 EI-DRDGNGTVDFPEFLGMMARKMKDTD----NEEEIREAFRVFDKDGNGFVSAAELRHV 109
Query: 121 MTEEGEPFSQEEMEEMLSAAIDPESNSINYKDYITMMV 158
MT GE S EE++EM+ AA +NY++++ ++V
Sbjct: 110 MTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLV 147
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 80.1 bits (196), Expect = 8e-16
Identities = 43/141 (30%), Positives = 83/141 (58%), Gaps = 5/141 (3%)
Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
++++EAF++FD + + T+D +E+ +R+LG P + E+ +I+EV + E TG I F F
Sbjct: 31 QEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEV-DREGTGKISFNDF 89
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
L VMT+ + E+ ++ +L+AF + D + G ++ L + E GE + EE++EM
Sbjct: 90 LAVMTQKMSEKD----TKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEM 145
Query: 137 LSAAIDPESNSINYKDYITMM 157
+ A +N ++++ +M
Sbjct: 146 IDEADRDGDGEVNEEEFLRIM 166
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 79.3 bits (194), Expect = 1e-15
Identities = 43/147 (29%), Positives = 87/147 (59%), Gaps = 5/147 (3%)
Query: 11 IVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGY 70
+ E ++I+EAF++FD + T+DV+E+ +R+LG P + E+ +I+E+ ++E TG
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEI-DKEGTGK 83
Query: 71 IRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQ 130
+ F FL VMT+ + E+ ++ +L+AF++ D + G ++ L + E GE +
Sbjct: 84 MNFGDFLTVMTQKMSEKD----TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTD 139
Query: 131 EEMEEMLSAAIDPESNSINYKDYITMM 157
EE++EM+ A ++ ++++ +M
Sbjct: 140 EELQEMIDEADRDGDGEVSEQEFLRIM 166
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 79.3 bits (194), Expect = 1e-15
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 9 EIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPT 68
E ++AEF K AF++FD + + V+E+GT++R LG PT+ EL +I EV +E+ +
Sbjct: 14 EEMIAEF----KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEV-DEDGS 68
Query: 69 GYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPF 128
G I FE+FL +M + E + E+ L F + D G++ +EL + GE
Sbjct: 69 GTIDFEEFLVMMVRQMKE-DAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHV 127
Query: 129 SQEEMEEMLSAAIDPESNSINYKDYITMM 157
+ EE+E ++ I++ +++ MM
Sbjct: 128 TDEEIESLMKDGDKNNDGRIDFDEFLKMM 156
Score = 31.6 bits (70), Expect = 0.31
Identities = 15/59 (25%), Positives = 35/59 (59%)
Query: 100 AFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEMLSAAIDPESNSINYKDYITMMV 158
AF++ D+ G ++ EL M G+ ++EE++ ++ + S +I++++++ MMV
Sbjct: 23 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 81
>gi|46397403 centrin 3 [Homo sapiens]
Length = 167
Score = 72.8 bits (177), Expect = 1e-13
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 6/156 (3%)
Query: 5 KDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEE 64
K R E+ E ++IK+AFE+FD + + +D E+ +R+LG + ++ ++ + +
Sbjct: 17 KKRRELS-EEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDR 75
Query: 65 EEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEE 124
E TG I FE F V+T+ +LER P + +L+AF++ D G ++ L + E
Sbjct: 76 EA-TGKITFEDFNEVVTDWILERD----PHEEILKAFKLFDDDDSGKISLRNLRRVAREL 130
Query: 125 GEPFSQEEMEEMLSAAIDPESNSINYKDYITMMVID 160
GE S EE+ M+ IN +++I +M D
Sbjct: 131 GENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTGD 166
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 70.9 bits (172), Expect = 5e-13
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 11 IVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGY 70
+ E + K+AF D + N T++ +E+G +++ G +E +L LI+EV+ + G
Sbjct: 5 LTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGD-GE 63
Query: 71 IRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQ 130
I F++FL +K R ED+ + AF D G +T DEL + M G+P Q
Sbjct: 64 ISFQEFLTAA------KKARAGLEDLQV-AFRAFDQDGDGHITVDELRRAMAGLGQPLPQ 116
Query: 131 EEMEEMLSAAIDPESNSINYKDYITMM 157
EE++ M+ A + +NY+++ M+
Sbjct: 117 EELDAMIREADVDQDGRVNYEEFARML 143
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 69.7 bits (169), Expect = 1e-12
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 6 DREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEE 65
D E + AE K+ K FE+FD E N V E+ ++ LG PT+ EL + +V+ +
Sbjct: 25 DMTERLSAEQIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRD 84
Query: 66 EPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEG 125
G+ + FL +M + + E L AF V D +G++ + L + G
Sbjct: 85 NK-GFFNCDGFLALMG---VYHEKAQNQESELRAAFRVFDKEGKGYIDWNTLKYVLMNAG 140
Query: 126 EPFSQEEMEEMLSAAIDPESNSINYKDYITMM 157
EP ++ E E+M+ A +I+Y++++ MM
Sbjct: 141 EPLNEVEAEQMMKEADKDGDRTIDYEEFVAMM 172
>gi|29568111 myosin regulatory light chain 9 isoform a [Homo
sapiens]
Length = 172
Score = 65.9 bits (159), Expect = 1e-11
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
++ KEAF + D + +D ++ ++ SLG PT+ L +++E G I F F
Sbjct: 32 QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLEGMMSEAP-----GPINFTMF 86
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
L + E L PEDV+ AF D GF+ +D L + +T G+ F+ EE++EM
Sbjct: 87 LTMFGEKLNGTD----PEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEM 142
Query: 137 LSAAIDPESNSINYKDYITMM 157
A + + NY ++ ++
Sbjct: 143 YREAPIDKKGNFNYVEFTRIL 163
>gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f
[Homo sapiens]
Length = 194
Score = 63.9 bits (154), Expect = 6e-11
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 3 DEKDREEIIVAEFHKK----IKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDL 58
+EK I EF K+ KEAF +FD ++ + + ++G ++R+LG PT E+ +
Sbjct: 35 EEKIDLSAIKIEFSKEQQDEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKV 94
Query: 59 IAEVEEEEPTG-YIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDEL 117
+ EE I FE+FLP+M + + K + ED + V D G + EL
Sbjct: 95 LGNPSNEELNAKKIEFEQFLPMM-QAISNNKDQATYED-FVEGLRVFDKEGNGTVMGAEL 152
Query: 118 IKYMTEEGEPFSQEEMEEMLSAAIDPESNSINYKDYI 154
+ GE +EE+E +++ D + INY+ ++
Sbjct: 153 RHVLATLGEKMKEEEVEALMAGQED-SNGCINYEAFV 188
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 63.5 bits (153), Expect = 7e-11
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query: 9 EIIVAEFHKKIKEAFEVFD-HESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEP 67
E + E + K AF++F + + +E+G ++R LG PT EL ++I EV+E+
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG- 68
Query: 68 TGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEP 127
+G + F++FL +M + + + E+ L F + D G++ DEL + GE
Sbjct: 69 SGTVDFDEFLVMMVRCMKDDS-KGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGET 127
Query: 128 FSQEEMEEMLSAAIDPESNSINYKDYITMM 157
+++++EE++ I+Y +++ M
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 32.0 bits (71), Expect = 0.24
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 107 AKRGFLTKDELIKYMTEEGEPFSQEEMEEMLSAAIDPESNSINYKDYITMMV 158
A+ G ++ EL K M G+ + EE++EM+ + S ++++ +++ MMV
Sbjct: 31 AEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f
[Homo sapiens]
Length = 150
Score = 63.2 bits (152), Expect = 1e-10
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 12 VAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTG-Y 70
+AEF KEAF +FD ++ + + ++G ++R+LG PT E+ ++ EE
Sbjct: 8 IAEF----KEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKK 63
Query: 71 IRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQ 130
I FE+FLP+M + + K + ED + V D G + EL + GE +
Sbjct: 64 IEFEQFLPMM-QAISNNKDQATYED-FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKE 121
Query: 131 EEMEEMLSAAIDPESNSINYKDYI 154
EE+E +++ D + INY+ ++
Sbjct: 122 EEVEALMAGQED-SNGCINYEAFV 144
>gi|4505303 smooth muscle and non-muscle myosin alkali light chain
6B [Homo sapiens]
Length = 208
Score = 62.4 bits (150), Expect = 2e-10
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 11 IVAEFHK----KIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEE 66
+V EF+K + KEAFE+FD + + + G ++R+LG PT E+ ++ + +E
Sbjct: 57 VVIEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDE 116
Query: 67 -PTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEG 125
+ + FE FLP++ + R + L F V D G + EL +T G
Sbjct: 117 LKSRRVDFETFLPMLQAVAKNRGQGTYED--YLEGFRVFDKEGNGKVMGAELRHVLTTLG 174
Query: 126 EPFSQEEMEEMLSAAIDPESNSINYKDYI 154
E ++EE+E +L A + + INY+ ++
Sbjct: 175 EKMTEEEVETVL-AGHEDSNGCINYEAFL 202
>gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 60.1 bits (144), Expect = 8e-10
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
++ KEAF + D + +D ++ ++ SLG PT+ L ++ E G I F F
Sbjct: 32 QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMM-----NEAPGPINFTMF 86
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
L + E L PEDV+ AF D G + +D L + +T G+ F+ EE++E+
Sbjct: 87 LTMFGEKLNGTD----PEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDEL 142
Query: 137 LSAAIDPESNSINYKDYITMM 157
A + + NY ++ ++
Sbjct: 143 YREAPIDKKGNFNYIEFTRIL 163
>gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo
sapiens]
Length = 166
Score = 60.1 bits (144), Expect = 8e-10
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
++ KEAF + D + +D ++ +LG + E D E+ +E P G I F F
Sbjct: 27 QEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEID---EMIKEAP-GPINFTVF 82
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
L + E L PE+ +L AF+V D +G L D + + +T + E FS+EE+++M
Sbjct: 83 LTMFGEKLKGAD----PEETILNAFKVFDPEGKGVLKADYVREMLTTQAERFSKEEVDQM 138
Query: 137 LSAAIDPESNSINYKDYITMMVIDE 161
+A + +++YK+ + ++ E
Sbjct: 139 FAAFPPDVTGNLDYKNLVHIITHGE 163
>gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo
sapiens]
Length = 154
Score = 60.1 bits (144), Expect = 8e-10
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
++ KEAF + D + +D ++ ++ SLG PT+ L ++ E G I F F
Sbjct: 14 QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMM-----NEAPGPINFTMF 68
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
L + E L PEDV+ AF D G + +D L + +T G+ F+ EE++E+
Sbjct: 69 LTMFGEKLNGTD----PEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDEL 124
Query: 137 LSAAIDPESNSINYKDYITMM 157
A + + NY ++ ++
Sbjct: 125 YREAPIDKKGNFNYIEFTRIL 145
>gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 60.1 bits (144), Expect = 8e-10
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
++ KEAF + D + +D ++ ++ SLG PT+ L ++ E G I F F
Sbjct: 32 QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMM-----NEAPGPINFTMF 86
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
L + E L PEDV+ AF D G + +D L + +T G+ F+ EE++E+
Sbjct: 87 LTMFGEKLNGTD----PEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDEL 142
Query: 137 LSAAIDPESNSINYKDYITMM 157
A + + NY ++ ++
Sbjct: 143 YREAPIDKKGNFNYIEFTRIL 163
>gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 60.1 bits (144), Expect = 8e-10
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
++ KEAF + D + +D ++ ++ SLG PT+ L ++ E G I F F
Sbjct: 32 QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMM-----NEAPGPINFTMF 86
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
L + E L PEDV+ AF D G + +D L + +T G+ F+ EE++E+
Sbjct: 87 LTMFGEKLNGTD----PEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDEL 142
Query: 137 LSAAIDPESNSINYKDYITMM 157
A + + NY ++ ++
Sbjct: 143 YREAPIDKKGNFNYIEFTRIL 163
>gi|11067753 calcium binding protein 5 [Homo sapiens]
Length = 173
Score = 59.7 bits (143), Expect = 1e-09
Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 2/155 (1%)
Query: 4 EKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVE 63
EK RE + + ++++EAF FD + + + +++G ++R++G PTE EL +L ++
Sbjct: 18 EKQRERPLGQDEIEELREAFLEFDKDRDGFISCKDLGNLMRTMGYMPTEMELIELGQQI- 76
Query: 64 EEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTE 123
G + F+ F+ +MT LL I + AF+ D+ G +T EL + M
Sbjct: 77 RMNLGGRVDFDDFVELMTPKLLAETAGMIGVQEMRDAFKEFDTNGDGEITLVELQQAMQR 136
Query: 124 -EGEPFSQEEMEEMLSAAIDPESNSINYKDYITMM 157
GE + E+ E++ A ++++++++ MM
Sbjct: 137 LLGERLTPREISEVVREADVNGDGTVDFEEFVKMM 171
>gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric
[Homo sapiens]
Length = 171
Score = 59.3 bits (142), Expect = 1e-09
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
++ KEAF + D + +D ++ ++ SLG PT+ L ++ E G I F F
Sbjct: 31 QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLDAMM-----NEAPGPINFTMF 85
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
L + E L PEDV+ AF D G + +D L + +T G+ F+ EE++E+
Sbjct: 86 LTMFGEKLNGTD----PEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDEL 141
Query: 137 LSAAIDPESNSINYKDYITMM 157
A + + NY ++ ++
Sbjct: 142 YREAPIDKKGNFNYIEFTRIL 162
>gi|28372499 myosin light chain, phosphorylatable, fast skeletal
muscle [Homo sapiens]
Length = 169
Score = 57.8 bits (138), Expect = 4e-09
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
++ KEAF V D + +D ++ ++G + E D + + E +G I F F
Sbjct: 28 QEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMK----EASGPINFTVF 83
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
L + E L PEDV+ AF+VLD +G + K L + +T + + FSQEE++ M
Sbjct: 84 LTMFGEKLKGAD----PEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNM 139
Query: 137 LSAAIDPESNSINYKD 152
+A +++YK+
Sbjct: 140 WAAFPPDVGGNVDYKN 155
>gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]
Length = 163
Score = 57.8 bits (138), Expect = 4e-09
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 5 KDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEE 64
KDRE + E ++++ AF+ FD + + + RE+G +R+LG PTE EL E+ +
Sbjct: 14 KDRE--LRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMEL----IEISQ 67
Query: 65 EEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTE- 123
+ G + FE F+ +M LL I L AF D+ G ++ EL +
Sbjct: 68 QISGGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGELRAALKAL 127
Query: 124 EGEPFSQEEMEEMLSAAIDPESNSINYKDYITMM 157
GE SQ E++E+L +++++++ MM
Sbjct: 128 LGERLSQREVDEILQDVDLNGDGLVDFEEFVRMM 161
>gi|88999583 myosin, light chain 6, alkali, smooth muscle and
non-muscle isoform 2 [Homo sapiens]
Length = 151
Score = 57.0 bits (136), Expect = 7e-09
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 18 KIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEE-PTGYIRFEKF 76
+ KEAF++FD + + + G ++R+LG PT E+ ++ + +E + FE F
Sbjct: 11 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVKVLDFEHF 70
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
LP M + + + K + ED + V D G + E+ + GE ++EE+ EM
Sbjct: 71 LP-MLQTVAKNKDQGTYED-YVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEV-EM 127
Query: 137 LSAAIDPESNSINYKDYITMMV 158
L A + + INY++ + M++
Sbjct: 128 LVAGHEDSNGCINYEELVRMVL 149
>gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]
Length = 220
Score = 57.0 bits (136), Expect = 7e-09
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 2 ADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAE 61
A + DRE + E ++++ AF+ FD + + + RE+G +R+LG PTE EL E
Sbjct: 68 ATQLDRE--LRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMEL----IE 121
Query: 62 VEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYM 121
+ ++ G + FE F+ +M LL I L AF D+ G ++ EL +
Sbjct: 122 ISQQISGGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGELRAAL 181
Query: 122 TE-EGEPFSQEEMEEMLSAAIDPESNSINYKDYITMM 157
GE SQ E++E+L +++++++ MM
Sbjct: 182 KALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRMM 218
>gi|21624641 calcium binding protein 4 [Homo sapiens]
Length = 275
Score = 55.8 bits (133), Expect = 2e-08
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 5 KDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEE 64
KDRE + E +++ AFE FD + + + RE+G +R+LG PTE EL ++ + +
Sbjct: 122 KDRE--LGPEELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMPTEMELLEVSQHI-K 178
Query: 65 EEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTE- 123
G + FE+F+ ++ L E + L AF D + G +T EL + +
Sbjct: 179 MRMGGRVDFEEFVELIGPKLREETAHMLGVRELRIAFREFDRDRDGRITVAELREAVPAL 238
Query: 124 EGEPFSQEEMEEMLSAAIDPESNSINYKDYITMM 157
GEP + E++EML ++++ +++ M+
Sbjct: 239 LGEPLAGPELDEMLREVDLNGDGTVDFDEFVMML 272
>gi|169167243 PREDICTED: similar to myosin regulatory light chain
MRCL2 [Homo sapiens]
Length = 377
Score = 54.7 bits (130), Expect = 3e-08
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
++ KEAF + D + + ++ ++ SLG PT+ L ++ E G I F
Sbjct: 237 QEFKEAFNMIDQNRDGFISKEDLHGMLASLGKNPTDACLDAVM-----NEAPGPINFTML 291
Query: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
L + + L PEDV+ AF D G + +D L + +T G+ F+ EE++E+
Sbjct: 292 LAMFGKKLNGTD----PEDVIRNAFACFDEEATGTIQEDYLRELLTTVGDQFTDEEVDEL 347
Query: 137 LSAAIDPESNSINYKDYITMM 157
+ A + + NY ++ +++
Sbjct: 348 YTEASIDKKGNFNYIEFTSIL 368
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,832,440
Number of Sequences: 37866
Number of extensions: 250410
Number of successful extensions: 884
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 742
Number of HSP's gapped (non-prelim): 130
length of query: 162
length of database: 18,247,518
effective HSP length: 94
effective length of query: 68
effective length of database: 14,688,114
effective search space: 998791752
effective search space used: 998791752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.