Guide to the Human Genome
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Name: MYL2 Sequence: fasta or formatted (166aa) NCBI GI: 94981553
Description:

slow cardiac myosin regulatory light chain 2

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         14           2
 C cysteine            0.0          0           0
 D aspartate           7.8         13           1
 E glutamate          10.2         17           2
 F phenylalanine       8.4         14           1
 G glycine             6.6         11           2
 H histidine           1.2          2           1
 I isoleucine          5.4          9           2
 K lysine              9.6         16           2
 L leucine             5.4          9           1
 M methionine          4.2          7           1
 N asparagine          6.0         10           1
 P proline             4.2          7           2
 Q glutamine           3.6          6           1
 R arginine            3.6          6           1
 S serine              1.8          3           1
 T threonine           6.0         10           2
 V valine              6.0         10           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   slow cardiac myosin regulatory light chain 2 
MYL10                 0.757   myosin, light chain 10, regulatory 
MYLPF                 0.741   myosin light chain, phosphorylatable, fast skeletal ...
MYL5                  0.660   myosin regulatory light chain 5 
MYL7                  0.608   myosin light chain 2a 
MYL12A                0.537   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL12B                0.528   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.528   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.528   myosin regulatory light chain MRCL2 isoform A 
MYL9                  0.524   myosin regulatory light chain 9 isoform a 
MYL12B                0.495   myosin regulatory light chain MRCL2 isoform B [Homo...
LOC391722             0.460   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.460   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.450   PREDICTED: similar to myosin regulatory light chain...
CALM3                 0.233   calmodulin 3 
CALM2                 0.233   calmodulin 2 
CALM1                 0.233   calmodulin 1 
CALML3                0.223   calmodulin-like 3 
MYL9                  0.214   myosin regulatory light chain 9 isoform b 
CALML4                0.159   calmodulin-like 4 isoform 1 
CETN2                 0.155   caltractin 
CETN3                 0.152   centrin 3 
MYL6B                 0.142   smooth muscle and non-muscle myosin alkali light chai...
MYL6                  0.136   myosin, light chain 6, alkali, smooth muscle and non...
CETN1                 0.136   centrin 1 
MYL6                  0.123   myosin, light chain 6, alkali, smooth muscle and non...
MYL1                  0.113   fast skeletal myosin alkali light chain 1 isoform 3f...
EFCAB2                0.113   EF-hand calcium binding domain 2 isoform a 
CALML4                0.113   calmodulin-like 4 isoform 2 
MYL1                  0.113   fast skeletal myosin alkali light chain 1 isoform 1f...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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