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Search of human proteins with 8922785
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922785 hypothetical protein LOC55267 [Homo sapiens]
(138 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922785 hypothetical protein LOC55267 [Homo sapiens] 300 3e-82
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 49 1e-06
gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens] 44 6e-05
gi|153792103 tetratricopeptide repeat domain 22 isoform 2 [Homo ... 42 1e-04
gi|7706501 WW domain binding protein 11 [Homo sapiens] 41 3e-04
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 41 4e-04
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 40 5e-04
gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo ... 40 6e-04
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 40 6e-04
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 40 8e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.001
gi|188536004 zinc finger protein 469 [Homo sapiens] 39 0.001
gi|24308547 hypothetical protein LOC196500 [Homo sapiens] 39 0.001
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 39 0.001
gi|40353727 synaptopodin isoform A [Homo sapiens] 39 0.001
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 39 0.002
gi|118402590 myosin XV [Homo sapiens] 39 0.002
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 39 0.002
gi|55770854 N-methyl-D-aspartate receptor subunit 2C precursor [... 39 0.002
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 39 0.002
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 38 0.002
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 38 0.002
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 38 0.002
gi|110832843 TBP-associated factor 4 [Homo sapiens] 38 0.002
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 38 0.002
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 38 0.003
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 38 0.003
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 38 0.003
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 38 0.003
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 38 0.003
>gi|8922785 hypothetical protein LOC55267 [Homo sapiens]
Length = 138
Score = 300 bits (768), Expect = 3e-82
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MPASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFW 60
MPASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFW
Sbjct: 1 MPASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFW 60
Query: 61 APGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSPARAGRTFQRGLVSNS 120
APGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSPARAGRTFQRGLVSNS
Sbjct: 61 APGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSPARAGRTFQRGLVSNS 120
Query: 121 WAHAIFLPRPPNVLELQV 138
WAHAIFLPRPPNVLELQV
Sbjct: 121 WAHAIFLPRPPNVLELQV 138
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 48.9 bits (115), Expect = 1e-06
Identities = 30/77 (38%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 12 PPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLV 71
PP P+PA+AP S P P PA P A S+ PA A APG P
Sbjct: 11 PPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATA--APGQTPASAQA 68
Query: 72 P-RSPGPVLRAPRLPHP 87
P ++P P L P LP P
Sbjct: 69 PAQTPAPALPGPALPGP 85
>gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens]
Length = 981
Score = 43.5 bits (101), Expect = 6e-05
Identities = 39/145 (26%), Positives = 56/145 (38%), Gaps = 18/145 (12%)
Query: 3 ASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGR----RARCPQSA--------HP 50
A A +W PP A P + +P +P P R P+ A P
Sbjct: 292 AGAEVSWEVSSPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISP 351
Query: 51 APTRGALTFWAPGSWPRVLLVPRSPGPVLRAPRLPHPAARA-RRRAWHG---ARLPGSPA 106
RGA+ APG+ ++ P PGP + P A + W G + P P
Sbjct: 352 QRVRGAVE--APGTPKSLIPGPSDPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPV 409
Query: 107 RAGRTFQRGLVSNSWAHAIFLPRPP 131
+A T +RGL+ + A+ P PP
Sbjct: 410 QAPSTSRRGLIRVTTQRALGQPPPP 434
>gi|153792103 tetratricopeptide repeat domain 22 isoform 2 [Homo
sapiens]
Length = 372
Score = 42.4 bits (98), Expect = 1e-04
Identities = 37/109 (33%), Positives = 44/109 (40%), Gaps = 16/109 (14%)
Query: 32 TRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSPGPVLRAPRLPHPA--A 89
T P G+ ++ P R A F+ G + VLR P L A
Sbjct: 278 TDPLDCFGKAIEIAKNQPPILNRLAKIFYFLGKQDMAIGTCNMALDVLRDPELNWQAYCT 337
Query: 90 RARRRAWHGARLPGSPARAGRTFQRGLVSNSWAHAIFLPRPPNVLELQV 138
RA+RR G T LVSNSWA A+ PRPP VLE QV
Sbjct: 338 RAKRR--------------GLTMLPRLVSNSWAQAVLPPRPPKVLEFQV 372
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 41.2 bits (95), Expect = 3e-04
Identities = 31/88 (35%), Positives = 33/88 (37%), Gaps = 14/88 (15%)
Query: 12 PPLCLPPLPASAPTSPPN-----------PATRPAPGPGRRARCPQSAHPAPTRGALTFW 60
PPL PP P P PP P RP PG R P+ P P G
Sbjct: 411 PPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGP 470
Query: 61 APGSWPRVLLVPRSPGPVLRAPRLPHPA 88
PG P +P P P PRLP PA
Sbjct: 471 PPGPPPG---LPPGPPPRGPPPRLPPPA 495
Score = 38.5 bits (88), Expect = 0.002
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 12/93 (12%)
Query: 3 ASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSA-HPAPTRGALTFWA 61
++A++ PP +PP AP P P P P P R P + P P GA F
Sbjct: 384 STASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLR 443
Query: 62 P-------GSWPRVLLVPRSPGPVLRAPRLPHP 87
P G PR+L PGP P P P
Sbjct: 444 PPGMPGLRGPLPRLL----PPGPPPGRPPGPPP 472
Score = 36.2 bits (82), Expect = 0.009
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 13 PLCLPPLPASAPTSPPNPATRPAPG--PGRRARCPQSAHPAPTRGALTFWAPGSWPRVLL 70
P LPP P P PP P P PG PG R P P P + PG L+
Sbjct: 455 PRLLPPGP--PPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLV 512
Query: 71 VPRSPGPVLRAPRLPHP 87
P P P P P P
Sbjct: 513 PPLGPAPPGLFPPAPLP 529
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 40.8 bits (94), Expect = 4e-04
Identities = 33/93 (35%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Query: 18 PLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPR---- 73
P P+ P PP+P P P R PQ+A P RG + A S P LVP
Sbjct: 1035 PFPSPGPPQPPHPPLAYGPAPSTRPMGPQAA-PLTIRGPSS--AGQSTPSPHLVPSPAPS 1091
Query: 74 -SPGPVLRAPRLPHPAARARRRAWHGARLPGSP 105
PGPV P P RR A L SP
Sbjct: 1092 PGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSP 1124
Score = 28.9 bits (63), Expect = 1.4
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 12/72 (16%)
Query: 13 PLCLPPLPASAPTSP-PNPATRPAP-----GPGR----RARCPQSAHPAPTRGALTFWAP 62
PL PP P + T P P+ + P P GP + RA P + AP G + AP
Sbjct: 768 PLHFPPSPFPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAPGPHAMPVAP--GPALYPAP 825
Query: 63 GSWPRVLLVPRS 74
P + LVPRS
Sbjct: 826 AYTPELGLVPRS 837
Score = 27.3 bits (59), Expect = 4.1
Identities = 25/96 (26%), Positives = 32/96 (33%), Gaps = 18/96 (18%)
Query: 12 PPLCLP---PLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRV 68
PP C P P P P + P A +P P + + PAP G P P
Sbjct: 906 PPPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQ 965
Query: 69 LLVPRSP---------------GPVLRAPRLPHPAA 89
P+ P P L P+ P+P A
Sbjct: 966 AFGPQPPQQPLPLQHPHLFPPQAPGLLPPQSPYPYA 1001
Score = 26.6 bits (57), Expect = 7.0
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 20 PASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGS 64
PAS P S P P++ P P PQ P A + P S
Sbjct: 1531 PASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSS 1575
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 40.4 bits (93), Expect = 5e-04
Identities = 37/104 (35%), Positives = 41/104 (39%), Gaps = 16/104 (15%)
Query: 17 PPLPASAPTSPPNPATRPAPGPGR--RARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRS 74
PP +AP PP PA PAP P R R + + GA PG P P S
Sbjct: 713 PPRRPAAPPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAP----APES 768
Query: 75 P--------GPVLRAPRLPHPAARARRRAWHGAR--LPGSPARA 108
P GP L R P PAA R LPG+PA A
Sbjct: 769 PRPGSGSGSGPGLAPARSPGPAADGPIDLSKKPRRPLPGAPAPA 812
Score = 31.6 bits (70), Expect = 0.22
Identities = 34/100 (34%), Positives = 36/100 (36%), Gaps = 25/100 (25%)
Query: 13 PLCLPP----LPASA-PTSPPNPATR-----------------PAPGPGRRARCPQSAHP 50
P PP LPA+A P PPN R P GPG AR P P
Sbjct: 841 PAAPPPGALGLPAAACPYCPPNGPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRGP 900
Query: 51 APTRGALTFWAPGS-WPRVLLVPRSPGPVLRAPRLPHPAA 89
+P PGS PR L P P P P PAA
Sbjct: 901 SPAPAPAASPQPGSRGPRDGLGPEPQEPPPGPP--PSPAA 938
Score = 28.5 bits (62), Expect = 1.8
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 12 PPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAP 52
PP PP PA+AP + P P P+ + + P PAP
Sbjct: 928 PPPGPPPSPAAAPEAVPPPPAPPSYS-DKGVQTPSKGTPAP 967
Score = 27.7 bits (60), Expect = 3.1
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 10/56 (17%)
Query: 17 PPLPASAPTSPP--NPATRPAPGPGRR------ARCPQSAHPAPTRGALTFWAPGS 64
PP PA AP P A R +PGPG R A P+ A RG+ +PGS
Sbjct: 618 PPGPARAPPGQPAEPDAPRSSPGPGAREEGAGGAATPEDG--AGGRGSEGSQSPGS 671
Score = 26.2 bits (56), Expect = 9.2
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 20 PASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTR--GALTFWAPGSWP 66
P +AP P PGP +R P PAP R L+ PGS P
Sbjct: 470 PEAAPILGPGE-----PGPQAPSRTPSPRSPAPARVKAELSSPTPGSSP 513
>gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
Length = 359
Score = 40.0 bits (92), Expect = 6e-04
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 16/92 (17%)
Query: 5 ATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGS 64
++A W L + P +AP S P+ TRP P +A P+ + P P AL PGS
Sbjct: 92 SSAPWRELTLPVSPADPAAPPSSPHAPTRPPP----QAVQPRPSEPTPGSEAL---PPGS 144
Query: 65 WPRVLLVPRSPG------PVLRAPRL---PHP 87
P P P P R+PR PHP
Sbjct: 145 LPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHP 176
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 40.0 bits (92), Expect = 6e-04
Identities = 30/100 (30%), Positives = 37/100 (37%), Gaps = 7/100 (7%)
Query: 13 PLCLPPLPASAPTSPPNPATRPAPGP-----GRRARCPQSA--HPAPTRGALTFWAPGSW 65
P+ PP+P + P PP P P P P +A PQ A H P L P +
Sbjct: 213 PVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGY 272
Query: 66 PRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSP 105
P + P SP + P P P A LP P
Sbjct: 273 PGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPP 312
Score = 31.2 bits (69), Expect = 0.28
Identities = 39/131 (29%), Positives = 46/131 (35%), Gaps = 13/131 (9%)
Query: 2 PASATAAWHCPPLCLPPLPASAPTSP----PNPATRPAPGPGRRARCPQSAHPAPTRGAL 57
PAS PP PPLP A SP P P P PG + P P P +
Sbjct: 279 PASPAQDAQEPPAPPPPLPPYASCSPRASLPAP---PLPGVNSSSETPP---PLPPKSP- 331
Query: 58 TFWAPGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSPARAGRTFQRGLV 117
+F AP +P P P P L R R G +L PA R+ L
Sbjct: 332 SFQAPPQKAGAQALPAPPAPPGSQPFL--QKKRHGRPGAGGGKLNPPPAPPARSPTTELS 389
Query: 118 SNSWAHAIFLP 128
S S + P
Sbjct: 390 SKSQQATAWTP 400
Score = 31.2 bits (69), Expect = 0.28
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 11 CPP---LCLPPLP---ASAPTSPPNPATRPA-PGPGRRARCPQSAHPAPTRGALTFWA-- 61
C P L PPLP +S+ T PP P P+ P ++A P G+ F
Sbjct: 302 CSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKK 361
Query: 62 ----PGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSPARAG 109
PG+ L P P P R+P + + AW + PG R G
Sbjct: 362 RHGRPGAGGGKLNPP--PAPPARSPTTELSSKSQQATAWTPTQQPGGQLRNG 411
Score = 29.3 bits (64), Expect = 1.1
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 12 PPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAP-TRGALTFWAPGSWPRVLL 70
P + PP P P PP P P+ P + P + P P T+G L AP P
Sbjct: 169 PNVPAPPPPTPPPPPPPLPPPLPSSSP---IKTPLVSPPGPLTKGNLPVVAP---PVPCA 222
Query: 71 VPRSPGPVLRAPRLPHPAA 89
P P P P PA+
Sbjct: 223 PPPPPPPPPPTPPPLPPAS 241
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 39.7 bits (91), Expect = 8e-04
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 20 PASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGA-LTFWAPGSWPRVLLVPRSPGPV 78
P PT P PA P GP + +H R A L FW PR P +P P
Sbjct: 18 PGQEPTLSPIPADGPWSGPDLSSEKRGGSHGQAGRDARLRFWNVPRQPRRTRKPAAPEPE 77
Query: 79 LRAPRLPHPAARA 91
L++P H ++RA
Sbjct: 78 LQSPSAGHASSRA 90
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 39.3 bits (90), Expect = 0.001
Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 15/104 (14%)
Query: 2 PASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWA 61
P+ A + PPL +PP P ++P P+ AT P P A P P+P +
Sbjct: 692 PSQAPPSLAAPPLQVPPSPPASPPMSPS-ATPPPQAPPPLAAPPLQVPPSPPA------S 744
Query: 62 PGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSP 105
P P PR P P+L AP L P + A LP SP
Sbjct: 745 PPMSPSATPPPRVP-PLLAAPPLQVPPSPP-------ASLPMSP 780
Score = 36.6 bits (83), Expect = 0.007
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Query: 2 PASATAA--WHCPPLCLPPLP-ASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALT 58
PAS T + P L PPL ASAP + P+ T P P P CP A P+P LT
Sbjct: 527 PASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAP-----CPLQAPPSP----LT 577
Query: 59 FWAPGSWPRVLLVPRSPGPVLRAPRL 84
P + + P P L +P L
Sbjct: 578 TPPPETPSSIATPPPQAPPALASPPL 603
Score = 31.6 bits (70), Expect = 0.22
Identities = 36/118 (30%), Positives = 44/118 (37%), Gaps = 18/118 (15%)
Query: 21 ASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSPGPVLR 80
A TS P P T P+P RR+R A T L AP + PR P + GP
Sbjct: 160 ARRDTSGPTPGT-PSPAMARRSRA------AGTEVGLPRPAPSARPR----PPTEGPRKS 208
Query: 81 APRL-------PHPAARARRRAWHGARLPGSPARAGRTFQRGLVSNSWAHAIFLPRPP 131
P PAAR R A G + P S + + + S A PR P
Sbjct: 209 VSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAP 266
Score = 31.6 bits (70), Expect = 0.22
Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 1 MPASATAAWHCPPLCLPPLPA-SAPTSPPNPA--TRPAPGPGRRARCPQSAHPAPTRGAL 57
+P S A+ PL PP A A +PP A + PA PG+ P ++ P
Sbjct: 768 VPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP 827
Query: 58 TFWAPGSWPRVLL-VPRSP--GPVLRAPRLP 85
AP LL VP SP P L+APR P
Sbjct: 828 PPQAPPVLAAPLLQVPPSPPASPTLQAPRRP 858
Score = 29.3 bits (64), Expect = 1.1
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Query: 17 PPL--PASAPTSPP--NPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVP 72
PP+ P S P SPP AT P+ P A P P+P +P P P
Sbjct: 671 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPA------SPPMSPSATPPP 724
Query: 73 RSPGPVLRAPRLPHP 87
++P P L AP L P
Sbjct: 725 QAP-PPLAAPPLQVP 738
Score = 28.9 bits (63), Expect = 1.4
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 22 SAPTSPPNPATRPAPGPGRRARCPQSAHPAP 52
SA TS NPA+RP P GR R P + + +P
Sbjct: 82 SAGTSSRNPASRP-PASGRGERAPPAKNTSP 111
Score = 28.9 bits (63), Expect = 1.4
Identities = 36/109 (33%), Positives = 45/109 (41%), Gaps = 21/109 (19%)
Query: 4 SATAAWHCPPL--CLPPLPASAPTSP----PNPATRPAPG--------PGRRARCPQSAH 49
S T A PP PLPA+ P SP P P P+P P A P A
Sbjct: 310 SGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAP 369
Query: 50 PAPTRGALTFWAPGSWPRV--LLVPRS-PGPVLRAPRLPHPAARARRRA 95
P+ T + AP S + + VP S P L+AP P P A + +A
Sbjct: 370 PSMTTPPMQ--APPSLQTIPPIQVPHSLTSPSLQAP--PSPLALSSLQA 414
Score = 28.5 bits (62), Expect = 1.8
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 12/100 (12%)
Query: 12 PPLCLPPLPASAPTSPPNP-ATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLL 70
P L PPL P+ P +P AT P P A P A P+P +P P
Sbjct: 596 PALASPPLQG-LPSPPLSPLATPPPQAPPXLALPPLQAPPSPPA------SPPLSPLATP 648
Query: 71 VPRSPGP----VLRAPRLPHPAARARRRAWHGARLPGSPA 106
P++P +L+AP P P+ + A P SP+
Sbjct: 649 SPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPS 688
Score = 28.5 bits (62), Expect = 1.8
Identities = 35/107 (32%), Positives = 42/107 (39%), Gaps = 24/107 (22%)
Query: 12 PPLCLPPLPASAPTSPPNPATRPAPGPGRR-----ARCPQSAHPAPTRGALTFWAPGSWP 66
PPL PPL P+ P +P P+ P R A P P+P P S P
Sbjct: 728 PPLAAPPLQVP-PSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSP---------PASLP 777
Query: 67 RVLLV---PRSPGPVLRAP---RLPHPAARARRRA--WHGARLPGSP 105
L P++P P L P LP P A +A A LP SP
Sbjct: 778 MSPLAKPPPQAP-PALATPPLQALPSPPASFPGQAPFSPSASLPMSP 823
Score = 28.5 bits (62), Expect = 1.8
Identities = 31/87 (35%), Positives = 34/87 (39%), Gaps = 13/87 (14%)
Query: 1 MPASATAAWHCPPLCLPPL---PASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGAL 57
M AT PP+ PL P S P SP A R P PG P ++ P R L
Sbjct: 821 MSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPG-----PDTSVSGP-RLTL 874
Query: 58 TFWAPGSWPRVLLVPRSPGPVLRAPRL 84
APG P RSP L P L
Sbjct: 875 AL-APGPPPP---PSRSPSSTLSGPDL 897
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 39.3 bits (90), Expect = 0.001
Identities = 43/122 (35%), Positives = 49/122 (40%), Gaps = 29/122 (23%)
Query: 2 PASATAAWHCPPLCLP----PLPASAPTSPPNP--ATRPA-----PGPGRRARCPQSAHP 50
P + AA PP LP P A PT P P ATR P PG+R PQS
Sbjct: 423 PDTELAAPGPPPARLPQLWDPTAAPYPTPPGGPLAATRSMFFNGQPSPGQRLCLPQS--- 479
Query: 51 APTRGALTFWAPGSWPRVLLVPR-SPGPVLRAPRLPHPAARARRRAWHGARLPGSPARAG 109
AP WP+VL R SP + RLP PA W G G+ AG
Sbjct: 480 ----------APLPWPQVLPTARPSPHGMEMLSRLPFPAGGPE---WQGGS-QGALGTAG 525
Query: 110 RT 111
+T
Sbjct: 526 KT 527
>gi|24308547 hypothetical protein LOC196500 [Homo sapiens]
Length = 282
Score = 39.3 bits (90), Expect = 0.001
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 25/113 (22%)
Query: 13 PLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVP 72
PL L PLP A S +P T PAP A P RG S PR + V
Sbjct: 19 PLLLLPLPPPAQGSSSSPRTPPAP-----------ARPPCARGG------PSAPRHVCVW 61
Query: 73 RSPGPVLRAPRLPHPAARARRRAWHGARLPGSPARAGRTFQRGLVSNSWAHAI 125
P R+PR+P R+RR+ G P +P+ F+ G S+ + AI
Sbjct: 62 ERAPPPSRSPRVP----RSRRQVLPGTAPPATPS----GFEEGPPSSQYPWAI 106
>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 547
Score = 38.9 bits (89), Expect = 0.001
Identities = 39/123 (31%), Positives = 47/123 (38%), Gaps = 23/123 (18%)
Query: 2 PASATAAWHCPPLCLP-------PLPASAPTSPPN-----PATRPAPG-PGRRARCPQSA 48
P+ + A CP L L P P A +P + PA P+P P RA P
Sbjct: 392 PSQSPAGTPCPVLSLGARRGVTLPCPVPAEAAPRDFCQRFPALEPSPRQPPARAPRPSPD 451
Query: 49 HPAPTRGALTFWAPGSWPRVLLVPRSPGPVLR----APRLPHPAARARRRAWHGARLPGS 104
PAP WAP V P +PGP P P P + RA+ R PG
Sbjct: 452 LPAPLDACP--WAPP----VYAPPAAPGPYAAWTSSRPARPAPLSHPTARAFQVPRRPGH 505
Query: 105 PAR 107
AR
Sbjct: 506 AAR 508
Score = 27.7 bits (60), Expect = 3.1
Identities = 35/124 (28%), Positives = 42/124 (33%), Gaps = 24/124 (19%)
Query: 20 PASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWA--------PGSWPRVLLV 71
P+ +P P P G CP A AP F A P PR
Sbjct: 392 PSQSPAGTPCPVLSLGARRGVTLPCPVPAEAAPRDFCQRFPALEPSPRQPPARAPRP--S 449
Query: 72 PRSPGPVLRAPRLP----HPAARARRRAWHGARLPGSPARAGRTFQRGLVSNSWAHAIFL 127
P P P+ P P PAA AW +R P PA +S+ A A +
Sbjct: 450 PDLPAPLDACPWAPPVYAPPAAPGPYAAWTSSR-PARPAP---------LSHPTARAFQV 499
Query: 128 PRPP 131
PR P
Sbjct: 500 PRRP 503
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 38.9 bits (89), Expect = 0.001
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 18 PLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSPGP 77
P P S P +PP P P P P R R PQ A P +AP +PRSP P
Sbjct: 780 PRPFSPPRAPPPPPPPPPPPP--RMRSPQPARPGSAAVPGAAFAP--------IPRSPLP 829
Query: 78 V----LRAPRLPHPA 88
+PR P PA
Sbjct: 830 AGPSSCTSPRSPLPA 844
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 38.5 bits (88), Expect = 0.002
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 1 MPASATAAWHCPPLCLPPLPASAPTSPPNPATR-PAPG------PGRRARCPQSAHPAPT 53
+PA ++W PP PP A A ++PP A PAP P + P A PAP+
Sbjct: 422 LPAVPASSWKPPPGLAPPQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAP--AIPAPS 479
Query: 54 RGALTFWAPGSWPRVLLVP----RSPGPVLRAPRLP 85
R A A S + VP ++P P +AP +P
Sbjct: 480 RKASA--ASASPRKASAVPAPPQKTPPPSQKAPSVP 513
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 38.5 bits (88), Expect = 0.002
Identities = 41/122 (33%), Positives = 49/122 (40%), Gaps = 17/122 (13%)
Query: 2 PASATAAWHCPPLCLPPLPASAPTSPPNPA----------TRPA-PGPGRRARCPQSAHP 50
PA T + H L PP+P P+S P PA RPA P R P A P
Sbjct: 649 PAPRTLS-HWSALLSPPVPPRPPSSGPPPAPPLSPALSGLPRPASPYGSLRRHPPPWAAP 707
Query: 51 A--PTRGALTFWAPGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSPARA 108
A P ++WA P V P P +L P P P+ R RR PG+ RA
Sbjct: 708 AHVPPAPQASWWAFVEPPAV--SPEVPPDLLAFPG-PRPSFRGSRRRGAAFGFPGASPRA 764
Query: 109 GR 110
R
Sbjct: 765 SR 766
Score = 33.5 bits (75), Expect = 0.057
Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 21/91 (23%)
Query: 21 ASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALT------FWAPGSWPRVLLVPRS 74
A +P + P P+ R +PG G C A P+P T F P PR L S
Sbjct: 769 AWSPLASPQPSLRSSPGLG---YCSPLAPPSPQLSLRTGPFQPPFLPPARRPRSL--QES 823
Query: 75 PGPVLRAPRLPHPAARARRRAWHGARLPGSP 105
P P A RL P G+ LPGSP
Sbjct: 824 PAPRRAAGRLGPP----------GSPLPGSP 844
Score = 33.1 bits (74), Expect = 0.075
Identities = 28/76 (36%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 4 SATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPG 63
S+ +C PL P S T P P P P RR R Q + PAP R A PG
Sbjct: 782 SSPGLGYCSPLAPPSPQLSLRTGPFQPPFLP---PARRPRSLQES-PAPRRAAGRLGPPG 837
Query: 64 SWPRVLLVPRSPGPVL 79
S + PR P P L
Sbjct: 838 S--PLPGSPRPPSPPL 851
Score = 26.2 bits (56), Expect = 9.2
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 22/86 (25%)
Query: 1 MPASATAAWHCP-PLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTF 59
M ATA P L LPA P +P T GP P + L
Sbjct: 2469 MTLQATALQQQPLSAALRSLPAEKPPAPEAQPTSVGTGP-------------PAKPVLLR 2515
Query: 60 WAPGSWPRVLLVPRSPGPVLRAPRLP 85
P P +P P+ +APRLP
Sbjct: 2516 ATPK--------PLAPAPLAKAPRLP 2533
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 38.5 bits (88), Expect = 0.002
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 19 LPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSP--- 75
LPAS PP+P PGP AR P + P G T AP P P
Sbjct: 75 LPASPAPDPPDPPDSAGPGP---ARSPPPSSKEPPEGTWTEGAPVKAAEDSARPELPDSA 131
Query: 76 -GPVLRAP-RLPHPAARARRR 94
GP R P R+P A RRR
Sbjct: 132 VGPGSREPLRVPEAVALERRR 152
>gi|55770854 N-methyl-D-aspartate receptor subunit 2C precursor [Homo
sapiens]
Length = 1233
Score = 38.5 bits (88), Expect = 0.002
Identities = 33/98 (33%), Positives = 38/98 (38%), Gaps = 19/98 (19%)
Query: 17 PPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSPG 76
PP P P S P+P P P P P+PT W P R LV R+P
Sbjct: 931 PPSPCPTPRSGPSPCL-PTPDP--------PPEPSPTG-----WGPPDGGRAALVRRAPQ 976
Query: 77 PVLRAPRLPHPAAR----ARRRAWHGARLPGSPARAGR 110
P R P P + +RR AW AR P GR
Sbjct: 977 PPGRPPTPGPPLSDVSRVSRRPAWE-ARWPVRTGHCGR 1013
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.5 bits (88), Expect = 0.002
Identities = 34/104 (32%), Positives = 35/104 (33%), Gaps = 14/104 (13%)
Query: 17 PPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSPG 76
PP P AP P A AP P P PAP A AP + P SPG
Sbjct: 108 PPAPPRAPRGAPAAAAAAAPPPTPAPPPP----PAPVAAAAPARAPRAAAAAATAPPSPG 163
Query: 77 PVLRAPRL----------PHPAARARRRAWHGARLPGSPARAGR 110
P PR P PAA G R PA A R
Sbjct: 164 PAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAR 207
Score = 30.0 bits (66), Expect = 0.63
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 2 PASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGP-GRRARCPQSAHPAPTRGALTF 59
P A AA PPL PP P + P P +P P P G R +A P R + +
Sbjct: 200 PPPAVAARE-PPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRY 257
Score = 27.3 bits (59), Expect = 4.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 17 PPLPASAPTSPPNPATRPAPGPGRRARCPQSAHP 50
PP PA+ P P R AP P AR P P
Sbjct: 181 PPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPP 214
Score = 26.2 bits (56), Expect = 9.2
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 11/64 (17%)
Query: 2 PASATAAWHCPPLCLPPL-------PASAPTSPPNPATRPAPGPGRRARCPQ-SAHPAPT 53
P A AA PP PP PA A PP P P P ++ + P P P
Sbjct: 180 PPPAPAA---PPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPE 236
Query: 54 RGAL 57
GA+
Sbjct: 237 GGAV 240
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 38.1 bits (87), Expect = 0.002
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 12 PPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLV 71
PP PP P PP P+ P P P A P +P+ + P + P L
Sbjct: 166 PPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLA 225
Query: 72 PRSPGPVLRAPRLPHPAA 89
P P P + AP P PA+
Sbjct: 226 P--PPPPVPAPAPPAPAS 241
Score = 28.9 bits (63), Expect = 1.4
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 12 PPLCLPPLPASAPTSPPNP-ATRPAPGPGRRARCPQSAHPA 51
PPL PP P P +PP P A + A P + P+S+ PA
Sbjct: 401 PPLP-PPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPA 440
Score = 28.5 bits (62), Expect = 1.8
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 14 LCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSW---PRVLL 70
L +PP P PP + P PG G P S P P L P S P +L
Sbjct: 137 LLIPPPPPGPAPGPPQDISEP-PG-GSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVL 194
Query: 71 VPRSPGPVLRAPRLPHP 87
SP L +P +P P
Sbjct: 195 EALSPPHTLSSPSIPTP 211
Score = 28.1 bits (61), Expect = 2.4
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 29/132 (21%)
Query: 1 MPASATAAWHCPPLCLPPLPASAPTSPPNPATRPA----PG-----------PGRRARCP 45
+P + A+ PP PP+PA AP +P +P T PG GR+A
Sbjct: 215 IPPAPPLAFLAPPP--PPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEAT 272
Query: 46 QSAHP-APTRGALTFWAPGSWPRVLLVPRS----PGPVLRAPRLPHPAARARRRAWHGA- 99
+++ P +P + P P L PRS P +R +P A+ R GA
Sbjct: 273 RASPPRSPAEPKGSALGPNPEPH-LTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGAT 331
Query: 100 -----RLPGSPA 106
RLP P+
Sbjct: 332 KKAPSRLPLPPS 343
Score = 27.7 bits (60), Expect = 3.1
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 17 PPLPASAPT-SPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSP 75
PPLP AP PP P PA P A+ ++AHP T S P + P P
Sbjct: 394 PPLPPPAPPLPPPAPPLPPAAPPLPCAQ--KAAHPP---AGFTKTPKSSSPALKPKPNPP 448
Query: 76 GPVLRAPRLP 85
P A P
Sbjct: 449 SPENTASSAP 458
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 38.1 bits (87), Expect = 0.002
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 12 PPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLV 71
PP PP P PP P+ P P P A P +P+ + P + P L
Sbjct: 166 PPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLA 225
Query: 72 PRSPGPVLRAPRLPHPAA 89
P P P + AP P PA+
Sbjct: 226 P--PPPPVPAPAPPAPAS 241
Score = 28.9 bits (63), Expect = 1.4
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 12 PPLCLPPLPASAPTSPPNP-ATRPAPGPGRRARCPQSAHPA 51
PPL PP P P +PP P A + A P + P+S+ PA
Sbjct: 401 PPLP-PPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPA 440
Score = 28.5 bits (62), Expect = 1.8
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 14 LCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSW---PRVLL 70
L +PP P PP + P PG G P S P P L P S P +L
Sbjct: 137 LLIPPPPPGPAPGPPQDISEP-PG-GSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVL 194
Query: 71 VPRSPGPVLRAPRLPHP 87
SP L +P +P P
Sbjct: 195 EALSPPHTLSSPSIPTP 211
Score = 28.1 bits (61), Expect = 2.4
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 29/132 (21%)
Query: 1 MPASATAAWHCPPLCLPPLPASAPTSPPNPATRPA----PG-----------PGRRARCP 45
+P + A+ PP PP+PA AP +P +P T PG GR+A
Sbjct: 215 IPPAPPLAFLAPPP--PPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEAT 272
Query: 46 QSAHP-APTRGALTFWAPGSWPRVLLVPRS----PGPVLRAPRLPHPAARARRRAWHGA- 99
+++ P +P + P P L PRS P +R +P A+ R GA
Sbjct: 273 RASPPRSPAEPKGSALGPNPEPH-LTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGAT 331
Query: 100 -----RLPGSPA 106
RLP P+
Sbjct: 332 KKAPSRLPLPPS 343
Score = 27.7 bits (60), Expect = 3.1
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 17 PPLPASAPT-SPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSP 75
PPLP AP PP P PA P A+ ++AHP T S P + P P
Sbjct: 394 PPLPPPAPPLPPPAPPLPPAAPPLPCAQ--KAAHPP---AGFTKTPKSSSPALKPKPNPP 448
Query: 76 GPVLRAPRLP 85
P A P
Sbjct: 449 SPENTASSAP 458
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 38.1 bits (87), Expect = 0.002
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 12 PPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLV 71
PP PP P PP P+ P P P A P +P+ + P + P L
Sbjct: 166 PPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLA 225
Query: 72 PRSPGPVLRAPRLPHPAA 89
P P P + AP P PA+
Sbjct: 226 P--PPPPVPAPAPPAPAS 241
Score = 28.9 bits (63), Expect = 1.4
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 12 PPLCLPPLPASAPTSPPNP-ATRPAPGPGRRARCPQSAHPA 51
PPL PP P P +PP P A + A P + P+S+ PA
Sbjct: 401 PPLP-PPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPA 440
Score = 28.5 bits (62), Expect = 1.8
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 14 LCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSW---PRVLL 70
L +PP P PP + P PG G P S P P L P S P +L
Sbjct: 137 LLIPPPPPGPAPGPPQDISEP-PG-GSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVL 194
Query: 71 VPRSPGPVLRAPRLPHP 87
SP L +P +P P
Sbjct: 195 EALSPPHTLSSPSIPTP 211
Score = 28.1 bits (61), Expect = 2.4
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 29/132 (21%)
Query: 1 MPASATAAWHCPPLCLPPLPASAPTSPPNPATRPA----PG-----------PGRRARCP 45
+P + A+ PP PP+PA AP +P +P T PG GR+A
Sbjct: 215 IPPAPPLAFLAPPP--PPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEAT 272
Query: 46 QSAHP-APTRGALTFWAPGSWPRVLLVPRS----PGPVLRAPRLPHPAARARRRAWHGA- 99
+++ P +P + P P L PRS P +R +P A+ R GA
Sbjct: 273 RASPPRSPAEPKGSALGPNPEPH-LTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGAT 331
Query: 100 -----RLPGSPA 106
RLP P+
Sbjct: 332 KKAPSRLPLPPS 343
Score = 27.7 bits (60), Expect = 3.1
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 17 PPLPASAPT-SPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSP 75
PPLP AP PP P PA P A+ ++AHP T S P + P P
Sbjct: 394 PPLPPPAPPLPPPAPPLPPAAPPLPCAQ--KAAHPP---AGFTKTPKSSSPALKPKPNPP 448
Query: 76 GPVLRAPRLP 85
P A P
Sbjct: 449 SPENTASSAP 458
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 38.1 bits (87), Expect = 0.002
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 9/112 (8%)
Query: 3 ASATAAWHCPPLCLPPLPA--------SAPTSPPNPATRPAPGPGRRARCPQSAHPAPTR 54
A+A AA P P PA + P P P P PGPG+ A P +A
Sbjct: 143 AAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAG-PGAAQTLNGS 201
Query: 55 GALTFWAPGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSPA 106
AL + P V LV P +L P+ P + + GA P +PA
Sbjct: 202 AALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPA 253
Score = 38.1 bits (87), Expect = 0.002
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 2 PASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWA 61
PA+ PP + A+AP +P P+ AP P A P PAP T
Sbjct: 231 PAAPGTVIQTPPF----VGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPA----TLAR 282
Query: 62 PGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSPARAG 109
P P GP AP +P PAA A+ GA +PA G
Sbjct: 283 PPGHP--------AGPPTAAPAVPPPAA-AQNGGSAGAAPAPAPAAGG 321
Score = 32.7 bits (73), Expect = 0.098
Identities = 28/86 (32%), Positives = 31/86 (36%), Gaps = 12/86 (13%)
Query: 2 PASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWA 61
PAS A+ P LP+ A PP P T G QS PT A
Sbjct: 366 PASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPT-------A 418
Query: 62 PGSWPRVLLVPRSPGPVLRAPRLPHP 87
S R L P + APRLP P
Sbjct: 419 TTSGIRATLT-----PTVLAPRLPQP 439
Score = 30.0 bits (66), Expect = 0.63
Identities = 34/105 (32%), Positives = 35/105 (33%), Gaps = 15/105 (14%)
Query: 2 PASATAAWHCPPLCLPPLPASAPTSPPNPATRPA------PGPGRRARCPQSAHPAPTRG 55
PA A A P P +AP PP RP PGP R A PAP
Sbjct: 67 PAGAAGAGPAAPA--EGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAA 124
Query: 56 ALTFWAPGS------WPRVLLVPRSPGPVLRAPRLP-HPAARARR 93
L GS P V P P P P PAA A R
Sbjct: 125 KLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAAR 169
Score = 29.3 bits (64), Expect = 1.1
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 10/79 (12%)
Query: 18 PLPASAPTSPPNPATRPAPG-------PGRRARCPQSAHPAPTRGALTFWAPGSWPRVLL 70
P PA A P + +P PG PG +A P+ A A T A G P
Sbjct: 313 PAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASG--PASTA 370
Query: 71 VPRSPGPVLRAPRLPHPAA 89
GP ++ LP PAA
Sbjct: 371 ASMVIGPTMQG-ALPSPAA 388
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 38.1 bits (87), Expect = 0.002
Identities = 32/77 (41%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 16 LPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSP 75
L P+PASAP S P P + PAP P P S AP + P S P ++L P P
Sbjct: 282 LVPVPASAPPSGPVPLSAPAPAP---LSVPVS---APPLALIQAPVPPSAPTLVLAP-VP 334
Query: 76 GPVLR-APRLPHPAARA 91
PVL P PAA A
Sbjct: 335 TPVLAPMPASTPPAAPA 351
Score = 34.7 bits (78), Expect = 0.026
Identities = 32/129 (24%), Positives = 47/129 (36%), Gaps = 17/129 (13%)
Query: 12 PPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAH----------PAPTRGALTFWA 61
P L P+PAS P + P P + P P P + P + PAPT + A
Sbjct: 334 PTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPA 393
Query: 62 PGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPGSPARAGRTFQRGLVSNSW 121
P P + P P PA+ + R A + + +FQ G V
Sbjct: 394 PTPMP-------AATPAAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTPS 446
Query: 122 AHAIFLPRP 130
+++P P
Sbjct: 447 QPLVYIPPP 455
Score = 29.6 bits (65), Expect = 0.83
Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 1 MPASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFW 60
+PASA + P P P S P S P A AP P + P P +
Sbjct: 285 VPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPAS 344
Query: 61 APGSWPRVLLVPR-SPGPVLRAPRLP 85
P + P VP +P P P P
Sbjct: 345 TPPAAPAPPSVPMPTPTPSSGPPSTP 370
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 37.7 bits (86), Expect = 0.003
Identities = 38/126 (30%), Positives = 42/126 (33%), Gaps = 40/126 (31%)
Query: 12 PPLCLP---------PLPASAPTSPPNPATRPA--------PGPGRRARC---------- 44
PPLC P P+PA+ P A PA P PGRR R
Sbjct: 41 PPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSV 100
Query: 45 -PQSAHPAPTRGALTFWAPGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRAWHGARLPG 103
P +H G + PG P P P R P PA RR W A G
Sbjct: 101 RPPLSHRPLRGGGMGRGRPGKGP-------PPNPSRRLP----PAPPGGRRTWLSALATG 149
Query: 104 SPARAG 109
PA G
Sbjct: 150 -PAAGG 154
Score = 30.4 bits (67), Expect = 0.49
Identities = 31/101 (30%), Positives = 35/101 (34%), Gaps = 33/101 (32%)
Query: 20 PASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRSPGPVL 79
PA+ SP P P P PGR + P P GA+ P P
Sbjct: 32 PATPARSPRPPLCAPRPAPGR------AQSPVPAAGAV-----------------PSP-- 66
Query: 80 RAPRLPHPAARARRRAWHGARLPGSPARAGRTFQRGLVSNS 120
P HPA A R P +P R GR RG V S
Sbjct: 67 --PAAAHPARPALR-----GETP-APGRRGRATTRGEVQPS 99
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 37.7 bits (86), Expect = 0.003
Identities = 35/96 (36%), Positives = 36/96 (37%), Gaps = 13/96 (13%)
Query: 17 PPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPRVLLVPRS-P 75
PP PA P TR PG R P P W P +P V L PR P
Sbjct: 513 PPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAP---------WPP--FPGVFLHPRPLP 561
Query: 76 GPVLRAPRLPHPAARARRRAWHGARLPGSPARAGRT 111
LRAP P P RR A P PARA T
Sbjct: 562 RVQLRAPPRP-PRPHGRRTGGPQATQPRPPARAQAT 596
Score = 26.2 bits (56), Expect = 9.2
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 7/40 (17%)
Query: 13 PLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAP 52
P LP + AP PP P GRR PQ+ P P
Sbjct: 557 PRPLPRVQLRAPPRPPRP-------HGRRTGGPQATQPRP 589
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 37.7 bits (86), Expect = 0.003
Identities = 37/117 (31%), Positives = 47/117 (40%), Gaps = 27/117 (23%)
Query: 5 ATAAWHCPPLCLPPLPASAPTSPPNPATR----------PAPGPGRRARCPQSAH-PAPT 53
A AA CPP C P+P PP P+ + P+P P RR+ P S P+P
Sbjct: 354 ARAAPPCPP-CQSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSPVPPSCQSPSPQ 412
Query: 54 RGALTFWAPGSWPRVLLVPRSPGPVLRAPRLPHPAARA-RRRAWHGARLPGSPARAG 109
R R + P P P R P P P R RA+ A+ P +AG
Sbjct: 413 R------------RSPVPPSCPAPQPRPPPPPPPGERTLAERAY--AKPPSHHVKAG 455
Score = 26.6 bits (57), Expect = 7.0
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 17 PPLPASAP---TSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWP-RVLLVP 72
P P+ +P +PP P + +P P RR+ P P R + P P R VP
Sbjct: 345 PQCPSPSPPARAAPPCPPCQ-SPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSPVP 403
Query: 73 ---RSPGPVLRAPRLPH-PAARAR 92
+SP P R+P P PA + R
Sbjct: 404 PSCQSPSPQRRSPVPPSCPAPQPR 427
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 37.7 bits (86), Expect = 0.003
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 2 PASATAAWHCPPLCLPP---LPASAPTSPPNPAT--------RPAPGPGRRAR 43
P+ A PP C PP PAS+PT PP P+ +PGPG R R
Sbjct: 981 PSPAAGPTKLPPCCHPPDPKPPASSPTPPPRPSAPCTLNVCPASSPGPGSRVR 1033
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 37.7 bits (86), Expect = 0.003
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 2 PASATAAWHCPPLCLPPLPASAPTS----PPNPATRPAPGPGRRARCPQSAHPAPTRGAL 57
PA A ++ P + P +PASAPT+ P A+ PAP P P A PAP +
Sbjct: 1876 PAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAP-TPVSAPNPAPPAPAQTQA 1934
Query: 58 TFWAPGSWP--RVLLVPRSPGPVLRAPRLPHP 87
P P + P P +R P P
Sbjct: 1935 QTHKPVQNPLQTTSQSSKQPPPSIRLPSAQTP 1966
Score = 28.5 bits (62), Expect = 1.8
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 12 PPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQS-AHPAPTRGALTFWAPGSWPRVLL 70
PPL PLP S TS PA+ AP P P S + P P A S P
Sbjct: 1747 PPLASAPLPPS--TSASVPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTSAP---- 1800
Query: 71 VPRSP 75
VP SP
Sbjct: 1801 VPASP 1805
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.479
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,734,799
Number of Sequences: 37866
Number of extensions: 618329
Number of successful extensions: 11506
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 1000
Number of HSP's that attempted gapping in prelim test: 6099
Number of HSP's gapped (non-prelim): 4771
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.