C12orf53 23811

Name: C12orf53	Sequence: fasta or formatted (282aa)		NCBI GI: 24308547
Description: hypothetical protein LOC196500		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 22 2 C cysteine 1.1 3 1 D aspartate 3.9 11 1 E glutamate 3.9 11 2 F phenylalanine 3.2 9 1 G glycine 10.6 30 2 H histidine 2.1 6 1 I isoleucine 3.5 10 3 K lysine 1.1 3 1 L leucine 9.6 27 4 M methionine 1.4 4 1 N asparagine 1.8 5 1 P proline 17.4 49 3 Q glutamine 3.9 11 2 R arginine 8.2 23 3 S serine 8.2 23 4 T threonine 4.6 13 1 V valine 4.6 13 1 W tryptophan 2.1 6 1 Y tyrosine 1.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC196500 AJAP1 0.037 adherens junction associated protein 1 AJAP1 0.037 adherens junction associated protein 1 FMN1 0.035 formin 1 WASL 0.035 Wiskott-Aldrich syndrome gene-like protein PPRC1 0.035 peroxisome proliferator-activated receptor gamma, co... SMARCC2 0.035 SWI/SNF-related matrix-associated actin-dependent re... CASKIN2 0.033 cask-interacting protein 2 isoform b CASKIN2 0.033 cask-interacting protein 2 isoform a SFPQ 0.033 splicing factor proline/glutamine rich (polypyrimidin... WDR33 0.033 WD repeat domain 33 isoform 1 SYDE1 0.033 synapse defective 1, Rho GTPase, homolog 1 DIAPH1 0.033 diaphanous 1 isoform 2 DIAPH1 0.033 diaphanous 1 isoform 1 PRB1 0.033 proline-rich protein BstNI subfamily 1 isoform 1 pre... SYN1 0.031 synapsin I isoform Ia SYN1 0.031 synapsin I isoform Ib HCN4 0.030 hyperpolarization activated cyclic nucleotide-gated p... FLJ22184 0.030 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.030 PREDICTED: hypothetical protein LOC80164 LOC100128084 0.030 PREDICTED: hypothetical protein MLL4 0.030 myeloid/lymphoid or mixed-lineage leukemia 4 PRB2 0.030 proline-rich protein BstNI subfamily 2 ESX1 0.030 extraembryonic, spermatogenesis, homeobox 1-like [Ho... NACA 0.030 nascent polypeptide-associated complex alpha subuni... PRR12 0.030 proline rich 12 HCN2 0.030 hyperpolarization activated cyclic nucleotide-gated... OBSCN 0.030 obscurin, cytoskeletal calmodulin and titin-interac... RAPH1 0.028 Ras association and pleckstrin homology domains 1 is... PCLO 0.028 piccolo isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.