Guide to the Human Genome
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Name: ZYG11A Sequence: fasta or formatted (736aa) NCBI GI: 88948888
Description:

PREDICTED: zyg-11 homolog A (C. elegans)

Referenced in:

Cullins and SCF Complexes
Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [759aa] PREDICTED: zyg-11 homolog A
alt mRNA [736aa] PREDICTED: zyg-11 homolog A (C. elegans)
alt prot [759aa] zyg-11 homolog A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         54           2
 C cysteine            3.3         24           2
 D aspartate           4.2         31           2
 E glutamate           4.6         34           2
 F phenylalanine       5.0         37           2
 G glycine             3.0         22           2
 H histidine           2.7         20           1
 I isoleucine          5.4         40           2
 K lysine              5.0         37           1
 L leucine            15.2        112           3
 M methionine          2.6         19           1
 N asparagine          4.2         31           2
 P proline             4.1         30           2
 Q glutamine           5.6         41           2
 R arginine            5.4         40           2
 S serine              7.7         57           3
 T threonine           6.1         45           2
 V valine              6.1         45           2
 W tryptophan          1.2          9           1
 Y tyrosine            1.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: zyg-11 homolog A (C. elegans) 
ZYG11A                1.000   PREDICTED: zyg-11 homolog A (C. elegans) 
ZYG11A                0.951   PREDICTED: zyg-11 homolog A 
ZYG11A                0.951   zyg-11 homolog A 
ZYG11B                0.553   zyg-11 homolog B 
ZER1                  0.100   zyg-11 homolog B (C. elegans)-like 
FBXL13                0.013   F-box and leucine-rich repeat protein 13 isoform 1 ...
AMN1                  0.011   antagonist of mitotic exit network 1 homolog 
KDM2A                 0.006   F-box and leucine-rich repeat protein 11 
TLR9                  0.006   toll-like receptor 9 isoform A precursor 
LRRC1                 0.006   leucine rich repeat containing 1 
CTNNB1                0.006   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.006   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.006   catenin (cadherin-associated protein), beta 1, 88kDa ...
COPG2                 0.006   coatomer protein complex, subunit gamma 2 
JUP                   0.005   junction plakoglobin 
JUP                   0.005   junction plakoglobin 
TXK                   0.005   TXK tyrosine kinase 
POF1B                 0.005   premature ovarian failure, 1B 
LOC100289281          0.005   PREDICTED: hypothetical protein 
LOC100289281          0.005   PREDICTED: hypothetical protein XP_002343069 
INSC                  0.005   inscuteable isoform a 
INSC                  0.005   inscuteable isoform b 
SKP2                  0.004   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.004   S-phase kinase-associated protein 2 isoform 2 
C12orf35              0.004   hypothetical protein LOC55196 
MYO5C                 0.004   myosin VC 
KIAA1305              0.004   hypothetical protein LOC57523 
TLR8                  0.003   toll-like receptor 8 
BMX                   0.003   BMX non-receptor tyrosine kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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