Guide to the Human Genome
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Name: NARF Sequence: fasta or formatted (397aa) NCBI GI: 84452151
Description:

nuclear prelamin A recognition factor isoform c

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [408aa] nuclear prelamin A recognition factor isoform d
alt prot [502aa] nuclear prelamin A recognition factor isoform b
alt prot [456aa] nuclear prelamin A recognition factor isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         35           3
 C cysteine            2.3          9           1
 D aspartate           5.3         21           1
 E glutamate           7.3         29           3
 F phenylalanine       4.8         19           2
 G glycine             6.0         24           2
 H histidine           3.8         15           1
 I isoleucine          3.5         14           1
 K lysine              6.3         25           2
 L leucine             9.8         39           2
 M methionine          1.5          6           1
 N asparagine          3.0         12           1
 P proline             3.8         15           2
 Q glutamine           5.5         22           2
 R arginine            6.3         25           2
 S serine              6.3         25           2
 T threonine           4.5         18           2
 V valine              7.6         30           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear prelamin A recognition factor isoform c [Hom... 
NARF                  1.000   nuclear prelamin A recognition factor isoform a [Homo...
NARF                  0.972   nuclear prelamin A recognition factor isoform b [Hom...
NARF                  0.939   nuclear prelamin A recognition factor isoform d [Ho...
NARFL                 0.494   nuclear prelamin A recognition factor-like 
CDKN1C                0.006   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.006   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.006   cyclin-dependent kinase inhibitor 1C isoform a 
SPEN                  0.006   spen homolog, transcriptional regulator 
PBRM1                 0.006   polybromo 1 isoform 1 
PBRM1                 0.006   polybromo 1 isoform 2 
PBRM1                 0.006   polybromo 1 isoform 4 
IFT74                 0.005   coiled-coil domain containing 2 isoform a 
IFT74                 0.005   coiled-coil domain containing 2 isoform a 
IFT74                 0.005   coiled-coil domain containing 2 isoform a 
FAM81A                0.005   hypothetical protein LOC145773 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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