Guide to the Human Genome
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Name: GALNT8 Sequence: fasta or formatted (637aa) NCBI GI: 8393412
Description:

polypeptide N-acetylgalactosaminyltransferase 8

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         43           2
 C cysteine            1.7         11           1
 D aspartate           5.2         33           2
 E glutamate           5.8         37           1
 F phenylalanine       3.0         19           1
 G glycine             5.5         35           2
 H histidine           3.3         21           2
 I isoleucine          6.0         38           2
 K lysine              7.2         46           2
 L leucine            13.2         84           3
 M methionine          2.0         13           2
 N asparagine          4.7         30           1
 P proline             4.4         28           1
 Q glutamine           4.2         27           2
 R arginine            5.8         37           1
 S serine              5.2         33           2
 T threonine           4.6         29           1
 V valine              6.0         38           2
 W tryptophan          2.2         14           1
 Y tyrosine            3.3         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   polypeptide N-acetylgalactosaminyltransferase 8 [Homo... 
GALNTL4               0.425   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT9                0.378   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
WBSCR17               0.369   UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...
GALNT13               0.214   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT11               0.213   N-acetylgalactosaminyltransferase 11 
GALNT1                0.211   polypeptide N-acetylgalactosaminyltransferase 1 [Hom...
GALNT4                0.204   polypeptide N-acetylgalactosaminyltransferase 4 [Hom...
GALNT6                0.194   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
GALNT2                0.190   polypeptide N-acetylgalactosaminyltransferase 2 [Homo...
GALNTL1               0.186   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT5                0.186   N-acetylgalactosaminyltransferase 5 
GALNT3                0.186   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
GALNT14               0.178   N-acetylgalactosaminyltransferase 14 
GALNT12               0.176   N-acetylgalactosaminyltransferase 12 
GALNTL2               0.175   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNTL5               0.175   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT10               0.175   GalNAc transferase 10 isoform a 
GALNT7                0.169   polypeptide N-acetylgalactosaminyltransferase 7 [Ho...
GALNTL6               0.165   N-acetylgalactosaminyltransferase-like 6 
GALNT9                0.153   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT10               0.051   GalNAc transferase 10 isoform b 
FHAD1                 0.009   forkhead-associated (FHA) phosphopeptide binding do...
CCDC146               0.009   coiled-coil domain containing 146 
CEP152                0.008   centrosomal protein 152kDa 
RAI14                 0.007   retinoic acid induced 14 isoform d 
RAI14                 0.007   retinoic acid induced 14 isoform c 
RAI14                 0.007   retinoic acid induced 14 isoform b 
RAI14                 0.007   retinoic acid induced 14 isoform a 
RAI14                 0.007   retinoic acid induced 14 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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