CCDC146 11

Name: CCDC146	Sequence: fasta or formatted (955aa)		NCBI GI: 100814339
Description: coiled-coil domain containing 146		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 54 2 C cysteine 0.7 7 1 D aspartate 4.1 39 2 E glutamate 14.0 134 5 F phenylalanine 2.4 23 1 G glycine 1.8 17 1 H histidine 2.2 21 2 I isoleucine 6.7 64 3 K lysine 12.8 122 4 L leucine 11.7 112 3 M methionine 3.1 30 2 N asparagine 4.9 47 2 P proline 2.4 23 1 Q glutamine 7.0 67 4 R arginine 6.2 59 3 S serine 3.8 36 2 T threonine 3.8 36 2 V valine 4.8 46 2 W tryptophan 0.2 2 1 Y tyrosine 1.7 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 146 CCDC147 0.086 coiled-coil domain containing 147 UACA 0.050 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.050 uveal autoantigen with coiled-coil domains and ankyr... MYH11 0.050 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.050 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.050 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.050 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CENPF 0.050 centromere protein F EEA1 0.049 early endosome antigen 1, 162kD AKAP9 0.048 A-kinase anchor protein 9 isoform 2 AKAP9 0.048 A-kinase anchor protein 9 isoform 3 CCDC18 0.048 sarcoma antigen NY-SAR-41 CCDC88A 0.047 coiled-coil domain containing 88A isoform 1 CCDC88A 0.046 coiled-coil domain containing 88A isoform 2 MYH9 0.045 myosin, heavy polypeptide 9, non-muscle CEP250 0.045 centrosomal protein 2 CENPE 0.045 centromere protein E MYH10 0.045 myosin, heavy polypeptide 10, non-muscle CIT 0.045 citron ANKRD26 0.045 ankyrin repeat domain 26 GOLGA4 0.044 golgi autoantigen, golgin subfamily a, 4 GOLGB1 0.044 golgi autoantigen, golgin subfamily b, macrogolgin ... MYH7 0.043 myosin, heavy chain 7, cardiac muscle, beta MYH6 0.042 myosin heavy chain 6 CROCC 0.042 ciliary rootlet coiled-coil KTN1 0.041 kinectin 1 isoform a KTN1 0.041 kinectin 1 isoform a ERC1 0.041 RAB6-interacting protein 2 isoform delta TCHH 0.041 trichohyalin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.