Guide to the Human Genome
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Name: GALNT12 Sequence: fasta or formatted (581aa) NCBI GI: 112807221
Description:

N-acetylgalactosaminyltransferase 12

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         36           2
 C cysteine            2.6         15           1
 D aspartate           4.6         27           2
 E glutamate           9.3         54           3
 F phenylalanine       4.1         24           2
 G glycine             6.9         40           2
 H histidine           3.1         18           1
 I isoleucine          3.6         21           2
 K lysine              4.0         23           2
 L leucine            11.0         64           2
 M methionine          1.9         11           1
 N asparagine          3.4         20           1
 P proline             6.0         35           2
 Q glutamine           4.1         24           1
 R arginine            9.0         52           3
 S serine              4.8         28           2
 T threonine           3.6         21           1
 V valine              6.4         37           2
 W tryptophan          2.1         12           1
 Y tyrosine            3.3         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-acetylgalactosaminyltransferase 12 
GALNT4                0.515   polypeptide N-acetylgalactosaminyltransferase 4 [Hom...
GALNT6                0.359   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
GALNT3                0.345   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
GALNT13               0.340   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT1                0.329   polypeptide N-acetylgalactosaminyltransferase 1 [Hom...
GALNTL2               0.308   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT2                0.300   polypeptide N-acetylgalactosaminyltransferase 2 [Homo...
GALNT10               0.288   GalNAc transferase 10 isoform a 
GALNTL6               0.277   N-acetylgalactosaminyltransferase-like 6 
GALNT11               0.272   N-acetylgalactosaminyltransferase 11 
GALNT14               0.271   N-acetylgalactosaminyltransferase 14 
GALNT5                0.261   N-acetylgalactosaminyltransferase 5 
GALNTL1               0.261   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT7                0.233   polypeptide N-acetylgalactosaminyltransferase 7 [Ho...
GALNT9                0.224   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNTL5               0.222   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNTL4               0.220   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
WBSCR17               0.213   UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...
GALNT8                0.190   polypeptide N-acetylgalactosaminyltransferase 8 [Homo...
GALNT10               0.069   GalNAc transferase 10 isoform b 
GALNT9                0.067   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
FOXO1                 0.009   forkhead box O1 
LOC100293975          0.008   PREDICTED: hypothetical protein 
LOC100290812          0.008   PREDICTED: hypothetical protein XP_002347678 
LOC100288205          0.008   PREDICTED: hypothetical protein XP_002343496 
UTP18                 0.008   UTP18, small subunit processome component 
ZIC5                  0.008   zinc finger protein of the cerebellum 5 
CHSY3                 0.008   chondroitin sulfate synthase 3 
LOC100289408          0.007   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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