Guide to the Human Genome
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Name: CMPK1 Sequence: fasta or formatted (228aa) NCBI GI: 7706497
Description:

UMP-CMP kinase 1 isoform a

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [179aa] UMP-CMP kinase 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          8           2
 C cysteine            2.6          6           1
 D aspartate           6.6         15           2
 E glutamate           7.9         18           2
 F phenylalanine       3.9          9           2
 G glycine             7.9         18           2
 H histidine           0.9          2           1
 I isoleucine          6.6         15           2
 K lysine              8.8         20           2
 L leucine            11.0         25           2
 M methionine          2.6          6           1
 N asparagine          3.9          9           2
 P proline             3.5          8           1
 Q glutamine           4.4         10           1
 R arginine            6.6         15           2
 S serine              6.6         15           2
 T threonine           3.5          8           1
 V valine              6.1         14           2
 W tryptophan          0.4          1           1
 Y tyrosine            2.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UMP-CMP kinase 1 isoform a 
CMPK1                 0.723   UMP-CMP kinase 1 isoform b 
AK1                   0.303   adenylate kinase 1 
AK5                   0.247   adenylate kinase 5 isoform 1 
AK5                   0.247   adenylate kinase 5 isoform 2 
AK2                   0.162   adenylate kinase 2 isoform a 
AK2                   0.162   adenylate kinase 2 isoform b 
AK3L1                 0.132   adenylate kinase 3-like 1 isoform 7 
AK3L1                 0.132   adenylate kinase 3-like 1 isoform 5 
AK3L1                 0.132   adenylate kinase 3-like 1 isoform 6 
AK3                   0.115   adenylate kinase 3 
AKD1                  0.060   adenylate kinase domain containing 1 isoform 1 [Hom...
C9orf98               0.053   putative adenylate kinase-like protein C9orf98 [Homo...
AKD1                  0.028   adenylate kinase domain containing 1 isoform 2 [Homo...
NCAPD3                0.021   non-SMC condensin II complex, subunit D3 
FSD2                  0.018   fibronectin type III and SPRY domain containing 2 [H...
DTYMK                 0.014   deoxythymidylate kinase (thymidylate kinase) 
UCK2                  0.012   uridine-cytidine kinase 2 
TAF9                  0.012   TAF9 RNA polymerase II, TATA box binding protein-asso...
PIK3R3                0.012   phosphoinositide-3-kinase, regulatory subunit 3 (p5...
PIK3R3                0.012   phosphoinositide-3-kinase, regulatory subunit 3 (p5...
PNKP                  0.012   polynucleotide kinase 3' phosphatase 
SLFN5                 0.009   schlafen family member 5 
TAF9                  0.009   TAF9 RNA polymerase II, TATA box binding protein-ass...
CPSF3L                0.007   cleavage and polyadenylation specific factor 3-like ...
PIK3R1                0.007   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.007   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.007   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
SPACA1                0.007   sperm acrosome associated 1 
AK7                   0.007   adenylate kinase 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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