CAPN9 36018

Name: CAPN9	Sequence: fasta or formatted (664aa)		NCBI GI: 7705383
Description: calpain 9 isoform 2		Referenced in: Stomach, Small Intestine, and Colon Cysteine Proteases
Other entries for this name: alt prot [690aa] calpain 9 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 49 2 C cysteine 1.7 11 1 D aspartate 6.5 43 2 E glutamate 8.4 56 3 F phenylalanine 7.1 47 2 G glycine 5.7 38 2 H histidine 2.4 16 1 I isoleucine 5.7 38 2 K lysine 6.3 42 3 L leucine 9.9 66 2 M methionine 1.5 10 1 N asparagine 3.8 25 1 P proline 4.4 29 2 Q glutamine 4.5 30 1 R arginine 5.7 38 2 S serine 6.0 40 2 T threonine 4.7 31 1 V valine 4.1 27 2 W tryptophan 2.0 13 1 Y tyrosine 2.3 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 9 isoform 2 CAPN9 0.987 calpain 9 isoform 1 CAPN3 0.566 calpain 3 isoform c CAPN3 0.541 calpain 3 isoform b CAPN3 0.538 calpain 3 isoform a CAPN1 0.516 calpain 1, large subunit CAPN3 0.503 calpain 3 isoform f CAPN2 0.497 calpain 2 isoform 1 CAPN8 0.495 calpain 8 CAPN2 0.470 calpain 2 isoform 2 CAPN11 0.453 calpain 11 CAPN12 0.323 calpain 12 CAPN14 0.308 calpain 14 CAPN5 0.218 calpain 5 CAPN13 0.188 calpain 13 CAPN3 0.184 calpain 3 isoform d CAPN6 0.175 calpain 6 CAPN10 0.112 calpain 10 isoform a CAPN10 0.107 calpain 10 isoform c CAPNS2 0.106 calpain small subunit 2 CAPNS1 0.105 calpain, small subunit 1 CAPNS1 0.105 calpain, small subunit 1 CAPN3 0.094 calpain 3 isoform e CAPN3 0.094 calpain 3 isoform e SOLH 0.076 small optic lobes SRI 0.052 sorcin isoform b SRI 0.052 sorcin isoform a GCA 0.048 grancalcin, EF-hand calcium binding protein CAPN7 0.043 calpain 7 PEF1 0.037 penta-EF-hand domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.