Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZBTB7A Sequence: fasta or formatted (584aa) NCBI GI: 7705375
Description:

zinc finger and BTB domain containing 7A

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.2         77           7
 C cysteine            2.4         14           2
 D aspartate           8.9         52           3
 E glutamate           5.3         31           3
 F phenylalanine       3.4         20           2
 G glycine            11.3         66           4
 H histidine           2.7         16           1
 I isoleucine          2.4         14           1
 K lysine              4.5         26           2
 L leucine             7.2         42           2
 M methionine          1.4          8           2
 N asparagine          2.7         16           1
 P proline             7.4         43           3
 Q glutamine           3.8         22           2
 R arginine            5.1         30           2
 S serine              6.0         35           2
 T threonine           3.9         23           1
 V valine              5.5         32           2
 W tryptophan          0.5          3           1
 Y tyrosine            2.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 7A 
ZBTB7B                0.253   zinc finger and BTB domain containing 7B 
LOC100293130          0.253   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.253   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.253   PREDICTED: similar to kruppel-related zinc finger p...
ZBTB7C                0.181   zinc finger and BTB domain containing 7C 
ZNF778                0.084   zinc finger protein 778 
ZBTB8B                0.083   zinc finger and BTB domain containing 8B 
ZNF470                0.083   zinc finger protein 470 
ZNF480                0.082   zinc finger protein 480 
ZNF562                0.082   zinc finger protein 562 isoform b 
ZNF562                0.082   zinc finger protein 562 isoform a 
ZNF562                0.082   zinc finger protein 562 isoform a 
ZNF559                0.081   zinc finger protein 559 
ZNF263                0.081   zinc finger protein 263 
ZFP112                0.081   zinc finger protein 228 isoform 1 
ZFP112                0.081   zinc finger protein 228 isoform 2 
ZFP37                 0.081   zinc finger protein 37 homolog 
ZNF420                0.080   zinc finger protein 420 
LOC400713             0.080   zinc finger protein LOC400713 
ZNF816A               0.079   zinc finger protein 816A 
ZNF837                0.079   zinc finger protein 837 isoform 1 
ZNF837                0.079   zinc finger protein 837 isoform 2 
ZNF658                0.079   zinc finger protein 658 
ZNF233                0.079   zinc finger protein 233 
LOC169834             0.079   hypothetical protein LOC169834 
ZNF83                 0.078   zinc finger protein 83 isoform a 
ZNF83                 0.078   zinc finger protein 83 isoform a 
ZNF83                 0.078   zinc finger protein 83 isoform a 
ZNF83                 0.078   zinc finger protein 83 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press