Guide to the Human Genome
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Name: ZNF480 Sequence: fasta or formatted (535aa) NCBI GI: 224549000
Description:

zinc finger protein 480

Referenced in:

Cardiovascular System
Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         26           1
 C cysteine            5.4         29           1
 D aspartate           2.2         12           2
 E glutamate           8.2         44           2
 F phenylalanine       3.9         21           1
 G glycine             6.0         32           1
 H histidine           6.4         34           1
 I isoleucine          4.7         25           1
 K lysine              9.9         53           2
 L leucine             6.5         35           2
 M methionine          1.1          6           1
 N asparagine          6.4         34           2
 P proline             3.7         20           1
 Q glutamine           3.6         19           1
 R arginine            6.4         34           2
 S serine              8.4         45           3
 T threonine           3.0         16           1
 V valine              4.5         24           1
 W tryptophan          0.9          5           1
 Y tyrosine            3.9         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 480 
LOC400713             0.633   zinc finger protein LOC400713 
ZNF534                0.624   zinc finger protein 534 isoform 1 
ZNF534                0.616   zinc finger protein 534 isoform 2 
ZNF528                0.614   zinc finger protein 528 
ZNF610                0.529   zinc finger protein 610 isoform a 
ZNF610                0.529   zinc finger protein 610 isoform a 
ZNF610                0.529   zinc finger protein 610 isoform a 
ZNF578                0.527   zinc finger protein 578 
ZNF766                0.526   zinc finger protein 766 
ZNF813                0.525   zinc finger protein 813 
ZNF665                0.523   zinc finger protein 665 
ZNF415                0.505   zinc finger protein 415 isoform 2 
LOC388559             0.504   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.504   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.504   PREDICTED: hypothetical protein LOC388559 
ZNF860                0.504   zinc finger protein 860 
ZNF845                0.498   zinc finger protein 845 
ZNF347                0.491   zinc finger protein 347 
ZNF160                0.481   zinc finger protein 160 
ZNF160                0.481   zinc finger protein 160 
ZNF160                0.481   zinc finger protein 160 
ZNF761                0.479   zinc finger protein 761 
ZNF836                0.479   zinc finger protein 836 
ZNF616                0.467   zinc finger protein 616 
ZNF415                0.460   zinc finger protein 415 isoform 1 
ZNF765                0.453   zinc finger protein 765 
ZNF83                 0.452   zinc finger protein 83 isoform a 
ZNF83                 0.452   zinc finger protein 83 isoform a 
ZNF83                 0.452   zinc finger protein 83 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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