XBP1 3686

Name: XBP1	Sequence: fasta or formatted (261aa)		NCBI GI: 14110395
Description: X-box binding protein 1 isoform XBP1(U)		Referenced in: CREB / ATF Family RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [376aa] X-box binding protein 1 isoform XBP1(S)
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.0 34 3 C cysteine 1.1 3 1 D aspartate 1.9 5 1 E glutamate 6.9 18 3 F phenylalanine 0.8 2 1 G glycine 4.6 12 2 H histidine 1.1 3 1 I isoleucine 1.5 4 1 K lysine 4.6 12 2 L leucine 13.0 34 3 M methionine 1.9 5 1 N asparagine 3.4 9 1 P proline 8.4 22 2 Q glutamine 10.0 26 2 R arginine 7.3 19 2 S serine 7.7 20 2 T threonine 3.4 9 2 V valine 6.1 16 3 W tryptophan 2.7 7 1 Y tyrosine 0.4 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 X-box binding protein 1 isoform XBP1(U) XBP1 0.590 X-box binding protein 1 isoform XBP1(S) CEBPD 0.047 CCAAT/enhancer binding protein delta ATF7 0.045 activating transcription factor 7 isoform 3 ATF7 0.045 activating transcription factor 7 isoform 2 ATF7 0.045 activating transcription factor 7 isoform 1 CEBPE 0.045 CCAAT/enhancer binding protein epsilon JUND 0.043 jun D proto-oncogene CREB3L2 0.041 cAMP responsive element binding protein 3-like 2 [Ho... ATF6B 0.041 activating transcription factor 6 beta isoform b [H... ATF6B 0.041 activating transcription factor 6 beta isoform a [Ho... JUN 0.039 jun oncogene RIMBP3B 0.039 RIMS binding protein 3B RIMBP3C 0.039 RIMS binding protein 3C RIMBP3 0.039 DKFZP434H0735 protein OPTN 0.039 optineurin OPTN 0.039 optineurin OPTN 0.039 optineurin OPTN 0.039 optineurin BATF3 0.039 basic leucine zipper transcription factor, ATF-like 3... CREM 0.039 cAMP responsive element modulator isoform a CREM 0.039 cAMP responsive element modulator isoform o CREM 0.039 cAMP responsive element modulator isoform m CREM 0.037 cAMP responsive element modulator isoform k ROCK1 0.034 Rho-associated, coiled-coil containing protein kinase... ATF6 0.034 activating transcription factor 6 CREB3L1 0.034 cAMP responsive element binding protein 3-like 1 [Ho... NFE2L2 0.034 nuclear factor erythroid 2-like 2 isoform 1 NFE2L2 0.034 nuclear factor erythroid 2-like 2 isoform 3 NFE2L2 0.034 nuclear factor erythroid 2-like 2 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.