Guide to the Human Genome
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Name: SNX24 Sequence: fasta or formatted (169aa) NCBI GI: 7662655
Description:

SBBI31 protein

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0          5           2
 C cysteine            1.2          2           1
 D aspartate           3.0          5           1
 E glutamate          11.2         19           2
 F phenylalanine       5.9         10           1
 G glycine             3.6          6           1
 H histidine           4.7          8           1
 I isoleucine          4.1          7           1
 K lysine              7.7         13           2
 L leucine            12.4         21           2
 M methionine          1.2          2           1
 N asparagine          3.0          5           1
 P proline             7.7         13           1
 Q glutamine           3.0          5           1
 R arginine            5.9         10           2
 S serine              7.1         12           2
 T threonine           2.4          4           1
 V valine              8.3         14           2
 W tryptophan          0.6          1           1
 Y tyrosine            4.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SBBI31 protein 
SNX22                 0.416   sorting nexin 22 
SGK3                  0.087   serum/glucocorticoid regulated kinase 3 isoform 2 [H...
SGK3                  0.087   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.087   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
NISCH                 0.062   nischarin 
SNX20                 0.062   sorting nexin 20 isoform 1 
SNX29                 0.056   sorting nexin 29 
SNX27                 0.053   sorting nexin family member 27 
SNX17                 0.053   sorting nexin 17 
PXK                   0.043   PX domain containing serine/threonine kinase 
SNX10                 0.040   sorting nexin 10 
SNX11                 0.040   sorting nexin 11 
SNX11                 0.040   sorting nexin 11 
SNX31                 0.037   sorting nexin 31 
NCF4                  0.037   neutrophil cytosolic factor 4 isoform 1 
NCF4                  0.037   neutrophil cytosolic factor 4 isoform 2 
RPS6KC1               0.034   ribosomal protein S6 kinase, 52kDa, polypeptide 1 is...
SNX12                 0.034   sorting nexin 12 
RPS6KC1               0.031   ribosomal protein S6 kinase, 52kDa, polypeptide 1 i...
PIK3C2A               0.031   phosphoinositide-3-kinase, class 2 alpha polypeptid...
SNX3                  0.028   sorting nexin 3 isoform a 
KIF16B                0.028   kinesin-like motor protein C20orf23 
SNX16                 0.028   sorting nexin 16 isoform a 
SNX16                 0.028   sorting nexin 16 isoform a 
SNX25                 0.025   sorting nexin 25 
PIK3C2B               0.025   phosphoinositide-3-kinase, class 2 beta polypeptide...
SNX21                 0.022   sorting nexin 21 isoform a 
SNX15                 0.019   sorting nexin 15 isoform B 
SNX15                 0.019   sorting nexin 15 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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