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Search of human proteins with 7661914
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7661914 proteasome (prosome, macropain) 26S subunit,
non-ATPase, 6 [Homo sapiens]
(389 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7661914 proteasome (prosome, macropain) 26S subunit, non-ATPa... 776 0.0
gi|47078238 G protein pathway suppressor 1 isoform 1 [Homo sapiens] 100 2e-21
gi|47078240 G protein pathway suppressor 1 isoform 2 [Homo sapiens] 98 1e-20
gi|38044112 restin isoform b [Homo sapiens] 34 0.20
gi|4506751 restin isoform a [Homo sapiens] 34 0.20
gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens] 34 0.26
gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens] 34 0.26
gi|219842262 COP9 constitutive photomorphogenic homolog subunit ... 33 0.34
gi|4759264 COP9 constitutive photomorphogenic homolog subunit 2 ... 33 0.34
gi|4506221 proteasome 26S non-ATPase subunit 12 isoform 1 [Homo ... 32 0.75
gi|28872765 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo... 32 0.75
gi|92859701 myosin VI [Homo sapiens] 31 2.2
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 30 2.8
gi|7657138 golgi integral membrane protein 4 [Homo sapiens] 30 2.8
gi|226495417 coiled-coil domain containing 102A [Homo sapiens] 30 3.7
gi|150421681 ATPase, class VI, type 11A isoform b [Homo sapiens] 30 3.7
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 30 3.7
gi|150421684 ATPase, class VI, type 11A isoform a [Homo sapiens] 30 3.7
gi|13899233 tetratricopeptide repeat domain 25 [Homo sapiens] 30 3.7
gi|82659109 retinoblastoma-associated factor 600 [Homo sapiens] 30 3.7
gi|4502175 apical protein of Xenopus-like [Homo sapiens] 30 4.9
gi|6857820 phosphatidylinositol-5-phosphate 4-kinase, type II, a... 29 6.3
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 29 6.3
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 29 6.3
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 29 6.3
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 29 6.3
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 29 6.3
gi|31982906 cingulin-like 1 [Homo sapiens] 29 6.3
gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens] 29 6.3
gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens] 29 8.3
>gi|7661914 proteasome (prosome, macropain) 26S subunit, non-ATPase,
6 [Homo sapiens]
Length = 389
Score = 776 bits (2003), Expect = 0.0
Identities = 389/389 (100%), Positives = 389/389 (100%)
Query: 1 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKS 60
MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKS
Sbjct: 1 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKS 60
Query: 61 LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGA 120
LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGA
Sbjct: 61 LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGA 120
Query: 121 LTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRL 180
LTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRL
Sbjct: 121 LTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRL 180
Query: 181 KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKV 240
KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKV
Sbjct: 181 KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKV 240
Query: 241 IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR 300
IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR
Sbjct: 241 IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR 300
Query: 301 IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD 360
IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD
Sbjct: 301 IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD 360
Query: 361 SKNWQYQETIKKGDLLLNRVQKLSRVINM 389
SKNWQYQETIKKGDLLLNRVQKLSRVINM
Sbjct: 361 SKNWQYQETIKKGDLLLNRVQKLSRVINM 389
>gi|47078238 G protein pathway suppressor 1 isoform 1 [Homo sapiens]
Length = 527
Score = 100 bits (249), Expect = 2e-21
Identities = 87/384 (22%), Positives = 170/384 (44%), Gaps = 17/384 (4%)
Query: 15 PDLRIAQLRFLLSLPEHRGDAAVRDE----LMAAVRDNNMAPYYEALCKS--LDWQIDVD 68
P LR+ L+ LS + + + +E L A R+ AP +A+ +S +D
Sbjct: 108 PTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAP--DAIPESGVEPPALDTA 165
Query: 69 LLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTY 128
+ +K +L++LD +L++ + N + IR ++ GD AL + +
Sbjct: 166 WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRAR 225
Query: 129 DKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS---LIEEGGDWDRRN-----RL 180
D + H +++ ++++ ++ + + KA+S + E+ G+ D + +L
Sbjct: 226 DYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKL 285
Query: 181 KVYQGLYCVAIRDFKQAAE-LFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREK 239
K GL +A R +KQAA+ L L + EL+ Y ++ +R +L+
Sbjct: 286 KCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRN 345
Query: 240 VIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREM 299
VI + L P VR +F YE +Y+ + L ++ + D APH R ++
Sbjct: 346 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQI 405
Query: 300 RIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRP 359
R A Q Y S + MA AF V ++ EL++ I G + ++D ++I+
Sbjct: 406 RNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDV 465
Query: 360 DSKNWQYQETIKKGDLLLNRVQKL 383
D ++ +++++ G R + +
Sbjct: 466 DQRSTTFEKSLLMGKEFQRRAKAM 489
>gi|47078240 G protein pathway suppressor 1 isoform 2 [Homo sapiens]
Length = 491
Score = 98.2 bits (243), Expect = 1e-20
Identities = 85/388 (21%), Positives = 172/388 (44%), Gaps = 21/388 (5%)
Query: 15 PDLRIAQLRFLLSLPEHRGDAAVRDEL--------MAAVRDNNMAPYYEALCKS--LDWQ 64
P LR+ L+ LS + + + +E+ +++R+ AP +A+ +S
Sbjct: 68 PTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAP--DAIPESGVEPPA 125
Query: 65 IDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAF 124
+D + +K +L++LD +L++ + N + IR ++ GD AL +
Sbjct: 126 LDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 185
Query: 125 RKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS---LIEEGGDWDRRN--- 178
+ D + H +++ ++++ ++ + + KA+S + E+ G+ D +
Sbjct: 186 SRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAI 245
Query: 179 --RLKVYQGLYCVAIRDFKQAAE-LFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPD 235
+LK GL +A R +KQAA+ L L + EL+ Y ++ +R +
Sbjct: 246 LTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQE 305
Query: 236 LREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYY 295
L+ VI + L P VR +F YE +Y+ + L ++ + D APH R
Sbjct: 306 LQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTL 365
Query: 296 VREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVE 355
++R A Q Y S + MA AF V ++ EL++ I G + ++D ++I+
Sbjct: 366 YTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILY 425
Query: 356 TNRPDSKNWQYQETIKKGDLLLNRVQKL 383
D ++ +++++ G R + +
Sbjct: 426 ARDVDQRSTTFEKSLLMGKEFQRRAKAM 453
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 34.3 bits (77), Expect = 0.20
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 65 IDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEI-RDAMMAKAEYLCR-IGDKEGALT 122
+D+D L K + E+K+L ++LE AEK + EI ++A +KA + R + +E LT
Sbjct: 728 LDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLT 787
Query: 123 AFRKTYDKTVALGHRLDIVFYLLR 146
++ + + L+ +L+
Sbjct: 788 NLQENLSEVSQVKETLEKELQILK 811
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 34.3 bits (77), Expect = 0.20
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 65 IDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEI-RDAMMAKAEYLCR-IGDKEGALT 122
+D+D L K + E+K+L ++LE AEK + EI ++A +KA + R + +E LT
Sbjct: 763 LDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLT 822
Query: 123 AFRKTYDKTVALGHRLDIVFYLLR 146
++ + + L+ +L+
Sbjct: 823 NLQENLSEVSQVKETLEKELQILK 846
>gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens]
Length = 296
Score = 33.9 bits (76), Expect = 0.26
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 SLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDE 86
+L + R RDEL ++ +E +C LDW++ V + +++ NE KR
Sbjct: 159 ALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGI-RIEFINEKGSKRTAT 217
Query: 87 ELEDAEKNLGESEIR--DAMMAKAEYLCRIGDKEGALTAFRKTYDKT 131
L + K G I+ D+++ K Y I ++ FRKT T
Sbjct: 218 YLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNE------FRKTIKLT 258
>gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens]
Length = 333
Score = 33.9 bits (76), Expect = 0.26
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 SLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDE 86
+L + R RDEL ++ +E +C LDW++ V + +++ NE KR
Sbjct: 196 ALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGI-RIEFINEKGSKRTAT 254
Query: 87 ELEDAEKNLGESEIR--DAMMAKAEYLCRIGDKEGALTAFRKTYDKT 131
L + K G I+ D+++ K Y I ++ FRKT T
Sbjct: 255 YLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNE------FRKTIKLT 295
>gi|219842262 COP9 constitutive photomorphogenic homolog subunit 2
isoform 2 [Homo sapiens]
Length = 450
Score = 33.5 bits (75), Expect = 0.34
Identities = 17/85 (20%), Positives = 40/85 (47%)
Query: 271 FFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFI 330
F + L + D H +R +R +L++ Y + + ++++ + V +
Sbjct: 333 FEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADV 392
Query: 331 DQELSRFIAAGRLHCKIDKVNEIVE 355
+ L + I +H +ID+VN+++E
Sbjct: 393 ESLLVQCILDNTIHGRIDQVNQLLE 417
>gi|4759264 COP9 constitutive photomorphogenic homolog subunit 2
isoform 1 [Homo sapiens]
Length = 443
Score = 33.5 bits (75), Expect = 0.34
Identities = 17/85 (20%), Positives = 40/85 (47%)
Query: 271 FFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFI 330
F + L + D H +R +R +L++ Y + + ++++ + V +
Sbjct: 326 FEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADV 385
Query: 331 DQELSRFIAAGRLHCKIDKVNEIVE 355
+ L + I +H +ID+VN+++E
Sbjct: 386 ESLLVQCILDNTIHGRIDQVNQLLE 410
>gi|4506221 proteasome 26S non-ATPase subunit 12 isoform 1 [Homo
sapiens]
Length = 456
Score = 32.3 bits (72), Expect = 0.75
Identities = 19/86 (22%), Positives = 40/86 (46%)
Query: 302 HAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDS 361
H + + Y +T+ MA+ + V+ + LS + + K+D++ I+ RP
Sbjct: 361 HNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKD 420
Query: 362 KNWQYQETIKKGDLLLNRVQKLSRVI 387
N + +K + L++ V K + +I
Sbjct: 421 PNNLLNDWSQKLNSLMSLVNKTTHLI 446
>gi|28872765 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo
sapiens]
Length = 436
Score = 32.3 bits (72), Expect = 0.75
Identities = 19/86 (22%), Positives = 40/86 (46%)
Query: 302 HAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDS 361
H + + Y +T+ MA+ + V+ + LS + + K+D++ I+ RP
Sbjct: 341 HNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKD 400
Query: 362 KNWQYQETIKKGDLLLNRVQKLSRVI 387
N + +K + L++ V K + +I
Sbjct: 401 PNNLLNDWSQKLNSLMSLVNKTTHLI 426
>gi|92859701 myosin VI [Homo sapiens]
Length = 1285
Score = 30.8 bits (68), Expect = 2.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 39 DELMAAVRDNNMAPY-----YEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEK 93
D LMA ++ M Y+AL KS + + K ++ + L+R+ EE+E K
Sbjct: 879 DTLMAKIKSTMMTQEQIQKEYDALVKSSEELLSALQKKKQQEEEAERLRRIQEEMEKERK 938
Query: 94 NLGESEIR 101
E E R
Sbjct: 939 RREEDEKR 946
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 30.4 bits (67), Expect = 2.8
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 9 EGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSL-----DW 63
EGL K+ L A+++ L E + + EL+A R+ E C SL D
Sbjct: 910 EGLIKSKILLEAKVKELTERLEEEEE--MNSELVAKKRN------LEDKCSSLKRDIDDL 961
Query: 64 QIDVDLLNKMKKANEDELKRLDEELEDAEKNLGE 97
++ + + K K A E+++K L EE+ E+N+ +
Sbjct: 962 ELTLTKVEKEKHATENKVKNLSEEMTALEENISK 995
>gi|7657138 golgi integral membrane protein 4 [Homo sapiens]
Length = 696
Score = 30.4 bits (67), Expect = 2.8
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 67 VDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRK 126
+++ ++M K+ +ELK+ +LE+ + GE R K +YL +KE L+ ++
Sbjct: 114 LNVQHQMLKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKE 173
Query: 127 T 127
T
Sbjct: 174 T 174
>gi|226495417 coiled-coil domain containing 102A [Homo sapiens]
Length = 550
Score = 30.0 bits (66), Expect = 3.7
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 54 YEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAK 107
YE L K+ Q + L+ +K+A++DEL R+ E+LED LG D MA+
Sbjct: 294 YEELSKTK--QEMLKQLSILKEAHQDELGRMSEDLED---ELGARSSMDRKMAE 342
>gi|150421681 ATPase, class VI, type 11A isoform b [Homo sapiens]
Length = 1191
Score = 30.0 bits (66), Expect = 3.7
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 16/76 (21%)
Query: 54 YEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKN---LGESEIRDAMMAKA-- 108
YE +CK LL K A +D K+L E E EK+ LG + + D + KA
Sbjct: 621 YEGICK---------LLQAAKVALQDREKKLAEAYEQIEKDLTLLGATAVEDRLQEKAAD 671
Query: 109 --EYLCRIGDKEGALT 122
E L + G K LT
Sbjct: 672 TIEALQKAGIKVWVLT 687
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 30.0 bits (66), Expect = 3.7
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 69 LLNKMKKANEDELKRLDEELEDAEKNLGESE------IRDAMMAKAEYLCRIGDKEGALT 122
LLN+ KK D L +L E+E+A + E+E I DA M AE L + D L
Sbjct: 1772 LLNQKKKLEAD-LAQLSGEVEEAAQERREAEEKAKKAITDAAM-MAEELKKEQDTSAHLE 1829
Query: 123 AFRKTYDKTV 132
+KT ++TV
Sbjct: 1830 RMKKTLEQTV 1839
>gi|150421684 ATPase, class VI, type 11A isoform a [Homo sapiens]
Length = 1134
Score = 30.0 bits (66), Expect = 3.7
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 16/76 (21%)
Query: 54 YEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKN---LGESEIRDAMMAKA-- 108
YE +CK LL K A +D K+L E E EK+ LG + + D + KA
Sbjct: 621 YEGICK---------LLQAAKVALQDREKKLAEAYEQIEKDLTLLGATAVEDRLQEKAAD 671
Query: 109 --EYLCRIGDKEGALT 122
E L + G K LT
Sbjct: 672 TIEALQKAGIKVWVLT 687
>gi|13899233 tetratricopeptide repeat domain 25 [Homo sapiens]
Length = 672
Score = 30.0 bits (66), Expect = 3.7
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 80 ELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRK---TYDKTVALGH 136
EL +++ L+ K+L ++ D AK+ L IG + F++ T+++ + L
Sbjct: 332 ELGQMEAALQSHRKDLEIAKEYDLPDAKSRALDNIGRVFARVGKFQQAIDTWEEKIPLAK 391
Query: 137 R-LDIVFYLLRIGLFYMDNDLITRNT---EKAKSLIEEGGDWDRRNRLKVYQGLYCVAIR 192
L+ + IG Y++ D + EK++ EE GD + + V V +R
Sbjct: 392 TTLEKTWLFHEIGRCYLELDQAWQAQNYGEKSQQCAEEEGDIEWQLNASVLVAQAQVKLR 451
Query: 193 DFKQAAELF 201
DF+ A F
Sbjct: 452 DFESAVNNF 460
>gi|82659109 retinoblastoma-associated factor 600 [Homo sapiens]
Length = 5183
Score = 30.0 bits (66), Expect = 3.7
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 250 LHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLE 309
LH +P+++ S+Y ++ +++ E K PH + + + A QL++
Sbjct: 1112 LHEIPSLQ----SIYTLDAAISKVQVSLDEHFSKMAAETDPHKSSEITKNLLPATLQLID 1167
Query: 310 SYRSLTLGYMAEAF---GVGVEFIDQELSRF---IAAGRLHCKIDKVNEIVETNRPDS 361
+Y S T Y+ + F G + ++L F +A G CK + + + N P S
Sbjct: 1168 TYASFTRAYLLQNFNEEGTTEKPSKEKLQGFAAVLAIGSSRCKANTLGPTLVQNLPSS 1225
>gi|4502175 apical protein of Xenopus-like [Homo sapiens]
Length = 1616
Score = 29.6 bits (65), Expect = 4.9
Identities = 55/250 (22%), Positives = 97/250 (38%), Gaps = 31/250 (12%)
Query: 23 RFLLSLPEHRGDAAVRDE--LMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANEDE 80
+ L +P R ++E + AAV + YY + I + L + ++ ED
Sbjct: 1366 KLLPKIPSPRSTEERKEEPSVPAAVSLATNSTYYSTSAPKAELLIKMKDLQEQQEHEEDS 1425
Query: 81 LKRLDEELEDAEKNLGES---------EIRDAMMAKAEYLCRIGDKEGAL---TAFRKTY 128
LD +L ++ L ES E R++++ + +G + A+ +
Sbjct: 1426 GSDLDHDLSVKKQELIESISRKLQVLREARESLLEDVQANTVLGAEVEAIVKGVCKPSEF 1485
Query: 129 DKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYC 188
DK LD V LL + E A + +++G R L Q +
Sbjct: 1486 DKFRMFIGDLDKVVNLL------LSLSGRLARVENALNNLDDGASPGDRQSLLEKQRVLI 1539
Query: 189 VAIRDFKQAAE-------LFLDTVSTFTSYE-LMDYKTFVTYTVYVSMIALERPDLREKV 240
D K+ E + D ++ + S E L DY+ FV S + +E+ +L +K+
Sbjct: 1540 QQHEDAKELKENLDRRERIVFDILANYLSEESLADYEHFVKMK---SALIIEQRELEDKI 1596
Query: 241 IKGAEILEVL 250
G E L+ L
Sbjct: 1597 HLGEEQLKCL 1606
>gi|6857820 phosphatidylinositol-5-phosphate 4-kinase, type II,
alpha [Homo sapiens]
Length = 406
Score = 29.3 bits (64), Expect = 6.3
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 28 LPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDEE 87
LP + + + + + DNN + E L K +++ + L++ +++R ++E
Sbjct: 230 LPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQE 289
Query: 88 LEDAEKNLGESE 99
+ E+N GE E
Sbjct: 290 EVECEENDGEEE 301
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 29.3 bits (64), Expect = 6.3
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 241 IKGAEI-LEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAP--HYRY 294
I GA I +L A+RQ + EC + +F+Q L +++K D L P HYR+
Sbjct: 284 IVGANIETYLLEKSRAIRQ---AKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRF 337
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 29.3 bits (64), Expect = 6.3
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 241 IKGAEI-LEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAP--HYRY 294
I GA I +L A+RQ + EC + +F+Q L +++K D L P HYR+
Sbjct: 276 IVGANIETYLLEKSRAIRQ---AKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRF 329
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 29.3 bits (64), Expect = 6.3
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 241 IKGAEI-LEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAP--HYRY 294
I GA I +L A+RQ + EC + +F+Q L +++K D L P HYR+
Sbjct: 284 IVGANIETYLLEKSRAIRQ---AKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRF 337
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 29.3 bits (64), Expect = 6.3
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 67 VDLLNKMKKANEDEL--KRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAF 124
V+ N M K NE +L K L++ L++A+ + D +++KA+Y +IG E T+
Sbjct: 1898 VEATNSMNK-NESDLIEKDLNDALQNAKALESAAVSLDGILSKAQYHLKIGSSE-QRTSC 1955
Query: 125 RKTYDK 130
R T D+
Sbjct: 1956 RATADQ 1961
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 29.3 bits (64), Expect = 6.3
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 67 VDLLNKMKKANEDEL--KRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAF 124
V+ N M K NE +L K L++ L++A+ + D +++KA+Y +IG E T+
Sbjct: 1891 VEATNSMNK-NESDLIEKDLNDALQNAKALESAAVSLDGILSKAQYHLKIGSSE-QRTSC 1948
Query: 125 RKTYDK 130
R T D+
Sbjct: 1949 RATADQ 1954
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 29.3 bits (64), Expect = 6.3
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 1 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPY--YEALC 58
+P EN EE LP+NP + + +R L H G V D +V+ +++ + + L
Sbjct: 93 VPKENSEELQLPENPYAQPSPIRNLKQPLLHEGKNGVLDRKDGSVKPSHLLNFQRHPELL 152
Query: 59 KSLDWQIDVDLLNKMKKANEDELKRLDEE 87
+ D + + L + + + LK L EE
Sbjct: 153 QPYDPEKNELNLQNHQPSESNWLKTLTEE 181
>gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens]
Length = 757
Score = 29.3 bits (64), Expect = 6.3
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 52 PYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMA 106
P + +C + Q+ ++L + N+++LK+L E E+ KN E +IR +A
Sbjct: 193 PLRKEIC---ELQVKKNILAEELSTNKNQLKQLTETYEEDRKNYSEVQIRCQRLA 244
>gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens]
Length = 284
Score = 28.9 bits (63), Expect = 8.3
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 55 EALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESE 99
E CK ++ ++ L K K EDEL + E+L+DA++ L +E
Sbjct: 33 EDKCKQVEEELTH--LQKKLKGTEDELDKYSEDLKDAQEKLELTE 75
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,996,560
Number of Sequences: 37866
Number of extensions: 525158
Number of successful extensions: 2078
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2015
Number of HSP's gapped (non-prelim): 95
length of query: 389
length of database: 18,247,518
effective HSP length: 104
effective length of query: 285
effective length of database: 14,309,454
effective search space: 4078194390
effective search space used: 4078194390
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.