Guide to the Human Genome
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Search of human proteins with 7661820

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7661820 ORMDL2 [Homo sapiens]
         (153 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7661820 ORMDL2 [Homo sapiens]                                      311   1e-85
gi|189458852 ORM1-like 1 [Homo sapiens]                               277   3e-75
gi|7706009 ORM1-like 1 [Homo sapiens]                                 277   3e-75
gi|27544927 ORM1-like 3 [Homo sapiens]                                275   1e-74
gi|90421313 cystic fibrosis transmembrane conductance regulator ...    29   1.8  
gi|21264602 laminin alpha 5 [Homo sapiens]                             28   2.3  
gi|52353300 olfactory receptor, family 8, subfamily K, member 3 ...    28   3.1  
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa...    27   5.2  
gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa...    27   5.2  
gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa...    27   5.2  
gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa...    27   5.2  
gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa...    27   5.2  
gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa...    27   5.2  
gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sa...    27   5.2  
gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap...    27   5.2  
gi|27903825 APG4 autophagy 4 homolog D [Homo sapiens]                  27   6.8  
gi|122937404 membrane bound O-acyltransferase domain containing ...    27   8.9  

>gi|7661820 ORMDL2 [Homo sapiens]
          Length = 153

 Score =  311 bits (797), Expect = 1e-85
 Identities = 153/153 (100%), Positives = 153/153 (100%)

Query: 1   MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60
           MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT
Sbjct: 1   MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60

Query: 61  YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120
           YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD
Sbjct: 61  YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120

Query: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153
           AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY
Sbjct: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153


>gi|189458852 ORM1-like 1 [Homo sapiens]
          Length = 153

 Score =  277 bits (708), Expect = 3e-75
 Identities = 127/153 (83%), Positives = 141/153 (92%)

Query: 1   MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60
           MNVGVAHSEVNPNTRVMNSRG+WL Y + VGLLH+VLLSIPFFS+PV WTLTN+IHNL  
Sbjct: 1   MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 60

Query: 61  YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120
           YVFLH VKGTPFETPDQGKARLLTHWEQ+DYG+QFTSSRKF +ISPI+LY LASFYTKYD
Sbjct: 61  YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120

Query: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153
             HF++NTASLLSVL+PK+PQ HGVR+FGINKY
Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153


>gi|7706009 ORM1-like 1 [Homo sapiens]
          Length = 153

 Score =  277 bits (708), Expect = 3e-75
 Identities = 127/153 (83%), Positives = 141/153 (92%)

Query: 1   MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60
           MNVGVAHSEVNPNTRVMNSRG+WL Y + VGLLH+VLLSIPFFS+PV WTLTN+IHNL  
Sbjct: 1   MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 60

Query: 61  YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120
           YVFLH VKGTPFETPDQGKARLLTHWEQ+DYG+QFTSSRKF +ISPI+LY LASFYTKYD
Sbjct: 61  YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120

Query: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153
             HF++NTASLLSVL+PK+PQ HGVR+FGINKY
Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153


>gi|27544927 ORM1-like 3 [Homo sapiens]
          Length = 153

 Score =  275 bits (703), Expect = 1e-74
 Identities = 124/153 (81%), Positives = 142/153 (92%)

Query: 1   MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60
           MNVG AHSEVNPNTRVMNSRGIWL+Y++ +GLLH+VLLSIPF S+PVVWTLTN+IHN+  
Sbjct: 1   MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 60

Query: 61  YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120
           Y+FLHTVKGTPFETPDQGKARLLTHWEQMDYG+QFT+SRKFL+I+PIVLY L SFYTKYD
Sbjct: 61  YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120

Query: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153
             HF++NT SL+SVL+PKLPQ HGVR+FGINKY
Sbjct: 121 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 153


>gi|90421313 cystic fibrosis transmembrane conductance regulator
           [Homo sapiens]
          Length = 1480

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 7   HSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLATYVFLHT 66
           HS  N    ++ S   +  + I VG+   +L    F  +P+V TL  V   +  +  LH+
Sbjct: 897 HSRNNSYAVIITSTSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITV-SKILHHKMLHS 955

Query: 67  VKGTPFETPDQGKA 80
           V   P  T +  KA
Sbjct: 956 VLQAPMSTLNTLKA 969


>gi|21264602 laminin alpha 5 [Homo sapiens]
          Length = 3695

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 5    VAHSEVNPNTRVMNSRGIWLAYIILV 30
            V HSE+    RV   R +WL Y+++V
Sbjct: 1354 VTHSELTVTVRVPKGRWLWLDYVLVV 1379


>gi|52353300 olfactory receptor, family 8, subfamily K, member 3
           [Homo sapiens]
          Length = 312

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 5/108 (4%)

Query: 28  ILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLATYVFLHTVKGTPFETPDQGKARLLTHWE 87
           IL G+  +  L  P F++ ++  + +V+ NL   V   T   +  +TP       L H  
Sbjct: 13  ILTGITDIAELQAPLFALFLMIYVISVMGNLGMIVL--TKLDSRLQTP---MYFFLRHLA 67

Query: 88  QMDYGLQFTSSRKFLSISPIVLYLLASFYTKYDAAHFLINTASLLSVL 135
            MD G   T   K L    +   +++ ++     A FL+   S L +L
Sbjct: 68  FMDLGYSTTVGPKMLVNFVVDKNIISYYFCATQLAFFLVFIGSELFIL 115


>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
           sapiens]
          Length = 1268

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    S +P V
Sbjct: 846 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 885


>gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo
           sapiens]
          Length = 1276

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    S +P V
Sbjct: 854 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 893


>gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo
           sapiens]
          Length = 1297

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    S +P V
Sbjct: 875 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 914


>gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo
           sapiens]
          Length = 1305

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    S +P V
Sbjct: 883 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 922


>gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo
           sapiens]
          Length = 1323

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    S +P V
Sbjct: 901 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 940


>gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo
           sapiens]
          Length = 1331

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    S +P V
Sbjct: 909 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 948


>gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo
           sapiens]
          Length = 1352

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    S +P V
Sbjct: 930 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 969


>gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo
           sapiens]
          Length = 1360

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 70  TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108
           +P  TP +G  R+ TH ++MD G ++   S    S +P V
Sbjct: 938 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 977


>gi|27903825 APG4 autophagy 4 homolog D [Homo sapiens]
          Length = 474

 Score = 26.9 bits (58), Expect = 6.8
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 76  DQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVL 109
           D+ KA+ LT W  + YG    S   F  IS I L
Sbjct: 63  DKFKAKFLTAWNNVKYGWVVKSRTSFSKISSIHL 96


>gi|122937404 membrane bound O-acyltransferase domain containing 1
           [Homo sapiens]
          Length = 495

 Score = 26.6 bits (57), Expect = 8.9
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 103 SISPIVLYLLASFYTKYDAAHFLINTASLLSVL-LPKLPQFHGVR 146
           +++P V+  +    + Y + +F ++  SLL +L LP  PQ H  R
Sbjct: 437 TVAPFVMLAVEPTISLYKSMYFYLHIISLLIILFLPMKPQAHTQR 481


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.140    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,270,654
Number of Sequences: 37866
Number of extensions: 203415
Number of successful extensions: 499
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 485
Number of HSP's gapped (non-prelim): 17
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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