BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|7661820 ORMDL2 [Homo sapiens] (153 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|7661820 ORMDL2 [Homo sapiens] 311 1e-85 gi|189458852 ORM1-like 1 [Homo sapiens] 277 3e-75 gi|7706009 ORM1-like 1 [Homo sapiens] 277 3e-75 gi|27544927 ORM1-like 3 [Homo sapiens] 275 1e-74 gi|90421313 cystic fibrosis transmembrane conductance regulator ... 29 1.8 gi|21264602 laminin alpha 5 [Homo sapiens] 28 2.3 gi|52353300 olfactory receptor, family 8, subfamily K, member 3 ... 28 3.1 gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa... 27 5.2 gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa... 27 5.2 gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa... 27 5.2 gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa... 27 5.2 gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa... 27 5.2 gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa... 27 5.2 gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sa... 27 5.2 gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap... 27 5.2 gi|27903825 APG4 autophagy 4 homolog D [Homo sapiens] 27 6.8 gi|122937404 membrane bound O-acyltransferase domain containing ... 27 8.9 >gi|7661820 ORMDL2 [Homo sapiens] Length = 153 Score = 311 bits (797), Expect = 1e-85 Identities = 153/153 (100%), Positives = 153/153 (100%) Query: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60 Query: 61 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD Sbjct: 61 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120 Query: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY Sbjct: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153 >gi|189458852 ORM1-like 1 [Homo sapiens] Length = 153 Score = 277 bits (708), Expect = 3e-75 Identities = 127/153 (83%), Positives = 141/153 (92%) Query: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60 MNVGVAHSEVNPNTRVMNSRG+WL Y + VGLLH+VLLSIPFFS+PV WTLTN+IHNL Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 60 Query: 61 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120 YVFLH VKGTPFETPDQGKARLLTHWEQ+DYG+QFTSSRKF +ISPI+LY LASFYTKYD Sbjct: 61 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120 Query: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153 HF++NTASLLSVL+PK+PQ HGVR+FGINKY Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153 >gi|7706009 ORM1-like 1 [Homo sapiens] Length = 153 Score = 277 bits (708), Expect = 3e-75 Identities = 127/153 (83%), Positives = 141/153 (92%) Query: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60 MNVGVAHSEVNPNTRVMNSRG+WL Y + VGLLH+VLLSIPFFS+PV WTLTN+IHNL Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 60 Query: 61 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120 YVFLH VKGTPFETPDQGKARLLTHWEQ+DYG+QFTSSRKF +ISPI+LY LASFYTKYD Sbjct: 61 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120 Query: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153 HF++NTASLLSVL+PK+PQ HGVR+FGINKY Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153 >gi|27544927 ORM1-like 3 [Homo sapiens] Length = 153 Score = 275 bits (703), Expect = 1e-74 Identities = 124/153 (81%), Positives = 142/153 (92%) Query: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60 MNVG AHSEVNPNTRVMNSRGIWL+Y++ +GLLH+VLLSIPF S+PVVWTLTN+IHN+ Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 60 Query: 61 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120 Y+FLHTVKGTPFETPDQGKARLLTHWEQMDYG+QFT+SRKFL+I+PIVLY L SFYTKYD Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120 Query: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153 HF++NT SL+SVL+PKLPQ HGVR+FGINKY Sbjct: 121 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 153 >gi|90421313 cystic fibrosis transmembrane conductance regulator [Homo sapiens] Length = 1480 Score = 28.9 bits (63), Expect = 1.8 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Query: 7 HSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLATYVFLHT 66 HS N ++ S + + I VG+ +L F +P+V TL V + + LH+ Sbjct: 897 HSRNNSYAVIITSTSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITV-SKILHHKMLHS 955 Query: 67 VKGTPFETPDQGKA 80 V P T + KA Sbjct: 956 VLQAPMSTLNTLKA 969 >gi|21264602 laminin alpha 5 [Homo sapiens] Length = 3695 Score = 28.5 bits (62), Expect = 2.3 Identities = 11/26 (42%), Positives = 16/26 (61%) Query: 5 VAHSEVNPNTRVMNSRGIWLAYIILV 30 V HSE+ RV R +WL Y+++V Sbjct: 1354 VTHSELTVTVRVPKGRWLWLDYVLVV 1379 >gi|52353300 olfactory receptor, family 8, subfamily K, member 3 [Homo sapiens] Length = 312 Score = 28.1 bits (61), Expect = 3.1 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 5/108 (4%) Query: 28 ILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLATYVFLHTVKGTPFETPDQGKARLLTHWE 87 IL G+ + L P F++ ++ + +V+ NL V T + +TP L H Sbjct: 13 ILTGITDIAELQAPLFALFLMIYVISVMGNLGMIVL--TKLDSRLQTP---MYFFLRHLA 67 Query: 88 QMDYGLQFTSSRKFLSISPIVLYLLASFYTKYDAAHFLINTASLLSVL 135 MD G T K L + +++ ++ A FL+ S L +L Sbjct: 68 FMDLGYSTTVGPKMLVNFVVDKNIISYYFCATQLAFFLVFIGSELFIL 115 >gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sapiens] Length = 1268 Score = 27.3 bits (59), Expect = 5.2 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 70 TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108 +P TP +G R+ TH ++MD G ++ S S +P V Sbjct: 846 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 885 >gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sapiens] Length = 1276 Score = 27.3 bits (59), Expect = 5.2 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 70 TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108 +P TP +G R+ TH ++MD G ++ S S +P V Sbjct: 854 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 893 >gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sapiens] Length = 1297 Score = 27.3 bits (59), Expect = 5.2 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 70 TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108 +P TP +G R+ TH ++MD G ++ S S +P V Sbjct: 875 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 914 >gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sapiens] Length = 1305 Score = 27.3 bits (59), Expect = 5.2 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 70 TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108 +P TP +G R+ TH ++MD G ++ S S +P V Sbjct: 883 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 922 >gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sapiens] Length = 1323 Score = 27.3 bits (59), Expect = 5.2 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 70 TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108 +P TP +G R+ TH ++MD G ++ S S +P V Sbjct: 901 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 940 >gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sapiens] Length = 1331 Score = 27.3 bits (59), Expect = 5.2 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 70 TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108 +P TP +G R+ TH ++MD G ++ S S +P V Sbjct: 909 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 948 >gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sapiens] Length = 1352 Score = 27.3 bits (59), Expect = 5.2 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 70 TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108 +P TP +G R+ TH ++MD G ++ S S +P V Sbjct: 930 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 969 >gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sapiens] Length = 1360 Score = 27.3 bits (59), Expect = 5.2 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 70 TPFETPDQGKARLLTHWEQMDYGLQF-TSSRKFLSISPIV 108 +P TP +G R+ TH ++MD G ++ S S +P V Sbjct: 938 SPAGTPTEGLGRVSTHSQEMDSGTEYGMGSSTKASFTPFV 977 >gi|27903825 APG4 autophagy 4 homolog D [Homo sapiens] Length = 474 Score = 26.9 bits (58), Expect = 6.8 Identities = 14/34 (41%), Positives = 17/34 (50%) Query: 76 DQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVL 109 D+ KA+ LT W + YG S F IS I L Sbjct: 63 DKFKAKFLTAWNNVKYGWVVKSRTSFSKISSIHL 96 >gi|122937404 membrane bound O-acyltransferase domain containing 1 [Homo sapiens] Length = 495 Score = 26.6 bits (57), Expect = 8.9 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 103 SISPIVLYLLASFYTKYDAAHFLINTASLLSVL-LPKLPQFHGVR 146 +++P V+ + + Y + +F ++ SLL +L LP PQ H R Sbjct: 437 TVAPFVMLAVEPTISLYKSMYFYLHIISLLIILFLPMKPQAHTQR 481 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.327 0.140 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,270,654 Number of Sequences: 37866 Number of extensions: 203415 Number of successful extensions: 499 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 485 Number of HSP's gapped (non-prelim): 17 length of query: 153 length of database: 18,247,518 effective HSP length: 93 effective length of query: 60 effective length of database: 14,725,980 effective search space: 883558800 effective search space used: 883558800 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.