RTDR1 35757

Name: RTDR1	Sequence: fasta or formatted (348aa)		NCBI GI: 7657530
Description: rhabdoid tumor deletion region protein 1		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 39 2 C cysteine 1.7 6 1 D aspartate 2.9 10 1 E glutamate 8.3 29 4 F phenylalanine 2.3 8 1 G glycine 3.4 12 1 H histidine 3.2 11 1 I isoleucine 6.3 22 2 K lysine 6.3 22 2 L leucine 14.1 49 3 M methionine 3.2 11 1 N asparagine 4.0 14 1 P proline 3.7 13 1 Q glutamine 5.2 18 1 R arginine 4.0 14 1 S serine 5.7 20 2 T threonine 4.9 17 2 V valine 7.2 25 2 W tryptophan 0.3 1 1 Y tyrosine 2.0 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 rhabdoid tumor deletion region protein 1 ARMC3 0.036 armadillo repeat containing 3 ARMC4 0.022 armadillo repeat containing 4 SPAG6 0.022 sperm associated antigen 6 isoform 1 SPAG6 0.022 sperm associated antigen 6 isoform 2 NEK10 0.020 NIMA-related kinase 10 isoform 3 KPNA7 0.014 karyopherin 7 PPP2R1B 0.014 beta isoform of regulatory subunit A, protein phosph... PPP2R1B 0.014 beta isoform of regulatory subunit A, protein phosph... ARVCF 0.012 armadillo repeat protein CTNNB1 0.012 catenin (cadherin-associated protein), beta 1, 88kD... CTNNB1 0.012 catenin (cadherin-associated protein), beta 1, 88kD... CTNNB1 0.012 catenin (cadherin-associated protein), beta 1, 88kDa ... KPNB1 0.011 karyopherin beta 1 JUP 0.011 junction plakoglobin JUP 0.011 junction plakoglobin HOOK3 0.011 golgi-associated microtubule-binding protein HOOK3 [... PPP2R1A 0.011 alpha isoform of regulatory subunit A, protein phosp... PKP4 0.009 plakophilin 4 isoform b PKP4 0.009 plakophilin 4 isoform a HEATR1 0.009 protein BAP28 C7orf31 0.009 hypothetical protein LOC136895 ARMC10 0.008 SVH protein isoform d ARMC10 0.008 SVH protein isoform c RAP1GDS1 0.008 RAP1, GTP-GDP dissociation stimulator 1 isoform 6 [... TMC6 0.008 transmembrane channel-like 6 TMC6 0.008 transmembrane channel-like 6 FAM179B 0.006 hypothetical protein LOC23116 KIAA0564 0.006 hypothetical protein LOC23078 isoform a KIAA0564 0.006 hypothetical protein LOC23078 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.