Guide to the Human Genome
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Name: ARMC3 Sequence: fasta or formatted (872aa) NCBI GI: 189409124
Description:

armadillo repeat containing 3

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         75           3
 C cysteine            1.6         14           1
 D aspartate           4.9         43           1
 E glutamate           8.8         77           4
 F phenylalanine       2.5         22           2
 G glycine             5.4         47           2
 H histidine           1.6         14           1
 I isoleucine          6.4         56           2
 K lysine              8.7         76           2
 L leucine            11.7        102           2
 M methionine          2.6         23           1
 N asparagine          6.0         52           3
 P proline             4.5         39           3
 Q glutamine           2.8         24           2
 R arginine            3.8         33           2
 S serine              7.9         69           5
 T threonine           3.6         31           2
 V valine              5.7         50           2
 W tryptophan          0.6          5           1
 Y tyrosine            2.3         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   armadillo repeat containing 3 
ARMC4                 0.037   armadillo repeat containing 4 
JUP                   0.030   junction plakoglobin 
JUP                   0.030   junction plakoglobin 
ANKAR                 0.027   ankyrin and armadillo repeat containing 
CTNNB1                0.025   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.025   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.025   catenin (cadherin-associated protein), beta 1, 88kDa ...
ARMC5                 0.020   armadillo repeat containing 5 isoform b 
ARMC5                 0.020   armadillo repeat containing 5 isoform a 
RAP1GDS1              0.020   RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [...
KPNA5                 0.019   karyopherin alpha 5 
RAP1GDS1              0.018   RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [...
RAP1GDS1              0.018   RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [...
RAP1GDS1              0.017   RAP1, GTP-GDP dissociation stimulator 1 isoform 6 [...
RAP1GDS1              0.017   RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [...
RAP1GDS1              0.017   RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [...
ARVCF                 0.017   armadillo repeat protein 
NEK10                 0.017   NIMA-related kinase 10 isoform 3 
KPNA7                 0.017   karyopherin 7 
KPNA1                 0.015   karyopherin alpha 1 
CTNND2                0.015   catenin (cadherin-associated protein), delta 2 (neur...
KPNA3                 0.015   karyopherin alpha 3 
RTDR1                 0.014   rhabdoid tumor deletion region protein 1 
KPNA4                 0.014   karyopherin alpha 4 
KPNA2                 0.013   karyopherin alpha 2 
PKP4                  0.012   plakophilin 4 isoform b 
PKP4                  0.012   plakophilin 4 isoform a 
PKP3                  0.012   plakophilin 3 
ARMCX2                0.012   ALEX2 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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