ARVCF 28300

Name: ARVCF	Sequence: fasta or formatted (962aa)		NCBI GI: 4502247
Description: armadillo repeat protein		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 93 3 C cysteine 1.2 12 1 D aspartate 6.2 60 2 E glutamate 7.7 74 2 F phenylalanine 1.8 17 1 G glycine 8.9 86 3 H histidine 1.9 18 1 I isoleucine 1.4 13 2 K lysine 3.7 36 2 L leucine 10.4 100 2 M methionine 1.6 15 1 N asparagine 2.5 24 1 P proline 8.0 77 3 Q glutamine 3.2 31 2 R arginine 9.6 92 4 S serine 6.8 65 2 T threonine 5.2 50 2 V valine 7.5 72 2 W tryptophan 1.1 11 1 Y tyrosine 1.7 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 armadillo repeat protein CTNND1 0.396 catenin, delta 1 isoform 1ABC CTNND1 0.388 catenin, delta 1 isoform 1A CTNND1 0.388 catenin, delta 1 isoform 1A CTNND1 0.388 catenin, delta 1 isoform 1A CTNND1 0.388 catenin, delta 1 isoform 1AB CTNND1 0.382 catenin, delta 1 isoform 1B CTNND1 0.368 catenin, delta 1 isoform 3AC CTNND1 0.368 catenin, delta 1 isoform 3ABC CTNND1 0.360 catenin, delta 1 isoform 3A CTNND1 0.360 catenin, delta 1 isoform 3A CTNND1 0.360 catenin, delta 1 isoform 3A CTNND1 0.360 catenin, delta 1 isoform 3AB CTNND1 0.354 catenin, delta 1 isoform 3B CTNND2 0.243 catenin (cadherin-associated protein), delta 2 (neur... PKP4 0.234 plakophilin 4 isoform a PKP4 0.234 plakophilin 4 isoform b PKP2 0.126 plakophilin 2 isoform 2a PKP1 0.116 plakophilin 1 isoform 1a LOC652798 0.116 PREDICTED: similar to plakophilin 1, partial PKP2 0.114 plakophilin 2 isoform 2b PKP3 0.114 plakophilin 3 PKP1 0.110 plakophilin 1 isoform 1b CTNNB1 0.015 catenin (cadherin-associated protein), beta 1, 88kD... CTNNB1 0.015 catenin (cadherin-associated protein), beta 1, 88kD... CTNNB1 0.015 catenin (cadherin-associated protein), beta 1, 88kDa ... ARMC3 0.015 armadillo repeat containing 3 ARMC4 0.015 armadillo repeat containing 4 JUP 0.014 junction plakoglobin JUP 0.014 junction plakoglobin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.