Search of human proteins with 7657504

Search of human proteins with 7657504

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]
         (367 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]       748   0.0  
gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens]     735   0.0  
gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens]     598   e-171
gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens]      592   e-169
gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]     584   e-167
gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens]     578   e-165
gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]       363   e-100
gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]       363   e-100
gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]       363   e-100
gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]      358   4e-99
gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]       358   4e-99
gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]      353   1e-97
gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens]      310   1e-84
gi|189181654 deleted in azoospermia [Homo sapiens]                     61   2e-09
gi|54292113 deleted in azoospermia 4 isoform 1 [Homo sapiens]          61   2e-09
gi|62244004 modulator of estrogen induced transcription isoform ...    61   2e-09
gi|63176611 modulator of estrogen induced transcription isoform ...    61   2e-09
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]          60   3e-09
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]          60   3e-09
gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens]       60   4e-09
gi|35493811 RNA binding motif protein 39 isoform a [Homo sapiens]      60   4e-09
gi|37574731 boule isoform 1 [Homo sapiens]                             60   4e-09
gi|45238849 poly(A) binding protein, cytoplasmic 3 [Homo sapiens]      59   5e-09
gi|208431836 poly A binding protein, cytoplasmic 4 isoform 3 [Ho...    59   7e-09
gi|4504715 poly A binding protein, cytoplasmic 4 isoform 2 [Homo...    59   7e-09
gi|208431833 poly A binding protein, cytoplasmic 4 isoform 1 [Ho...    59   7e-09
gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]      59   9e-09
gi|14719414 boule isoform 2 [Homo sapiens]                             58   1e-08
gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]     58   1e-08
gi|116734698 RNA binding motif protein 23 isoform 3 [Homo sapiens]     58   1e-08

>gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]
          Length = 367

 Score =  748 bits (1930), Expect = 0.0
 Identities = 367/367 (100%), Positives = 367/367 (100%)

Query: 1   MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
           MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT
Sbjct: 1   MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60

Query: 61  LYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP 120
           LYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP
Sbjct: 61  LYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP 120

Query: 121 FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 180
           FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK
Sbjct: 121 FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 180

Query: 181 IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG 240
           IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG
Sbjct: 181 IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG 240

Query: 241 RGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVDMQ 300
           RGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVDMQ
Sbjct: 241 RGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVDMQ 300

Query: 301 PTDMHSLLLQPQPPLLQPLQPLTVTVMAGCTQPTPTMPLPLPLAMELALWRVYTEVATAD 360
           PTDMHSLLLQPQPPLLQPLQPLTVTVMAGCTQPTPTMPLPLPLAMELALWRVYTEVATAD
Sbjct: 301 PTDMHSLLLQPQPPLLQPLQPLTVTVMAGCTQPTPTMPLPLPLAMELALWRVYTEVATAD 360

Query: 361 LPPTEVT 367
           LPPTEVT
Sbjct: 361 LPPTEVT 367


>gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens]
          Length = 370

 Score =  735 bits (1897), Expect = 0.0
 Identities = 365/371 (98%), Positives = 366/371 (98%), Gaps = 5/371 (1%)

Query: 1   MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
           MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT
Sbjct: 1   MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60

Query: 61  LYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP 120
           LYGSTQAHGEQSSNSPSTQNGSLT TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP
Sbjct: 61  LYGSTQAHGEQSSNSPSTQNGSLT-TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP 119

Query: 121 FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 180
           FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK
Sbjct: 120 FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 179

Query: 181 IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG 240
           IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG
Sbjct: 180 IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG 239

Query: 241 RGGINTYIPLI----IPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPG 296
           RGGINTYIPLI    +PGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPG
Sbjct: 240 RGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPG 299

Query: 297 VDMQPTDMHSLLLQPQPPLLQPLQPLTVTVMAGCTQPTPTMPLPLPLAMELALWRVYTEV 356
           VDMQPTDMHSLLLQPQPPLLQPLQPLTVTVMAGCTQPTPTMPLPLPLAMELALWRVYTEV
Sbjct: 300 VDMQPTDMHSLLLQPQPPLLQPLQPLTVTVMAGCTQPTPTMPLPLPLAMELALWRVYTEV 359

Query: 357 ATADLPPTEVT 367
           ATADLPPTEVT
Sbjct: 360 ATADLPPTEVT 370


>gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens]
          Length = 376

 Score =  598 bits (1543), Expect = e-171
 Identities = 297/300 (99%), Positives = 297/300 (99%), Gaps = 1/300 (0%)

Query: 1   MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
           MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT
Sbjct: 1   MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60

Query: 61  LYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP 120
           LYGSTQAHGEQSSNSPSTQNGSLT TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP
Sbjct: 61  LYGSTQAHGEQSSNSPSTQNGSLT-TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP 119

Query: 121 FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 180
           FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK
Sbjct: 120 FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 179

Query: 181 IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG 240
           IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG
Sbjct: 180 IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG 239

Query: 241 RGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVDMQ 300
           RGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV  Q
Sbjct: 240 RGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQ 299


>gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens]
          Length = 380

 Score =  592 bits (1527), Expect = e-169
 Identities = 296/304 (97%), Positives = 297/304 (97%), Gaps = 5/304 (1%)

Query: 1   MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
           MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT
Sbjct: 1   MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60

Query: 61  LYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP 120
           LYGSTQAHGEQSSNSPSTQNGSLT TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP
Sbjct: 61  LYGSTQAHGEQSSNSPSTQNGSLT-TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP 119

Query: 121 FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 180
           FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK
Sbjct: 120 FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 179

Query: 181 IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG 240
           IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG
Sbjct: 180 IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG 239

Query: 241 RGGINTYIPLI----IPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPG 296
           RGGINTYIPLI    +PGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPG
Sbjct: 240 RGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPG 299

Query: 297 VDMQ 300
           V  Q
Sbjct: 300 VVYQ 303


>gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]
          Length = 451

 Score =  584 bits (1506), Expect = e-167
 Identities = 289/297 (97%), Positives = 291/297 (97%), Gaps = 4/297 (1%)

Query: 8   TQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 67
           +QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA
Sbjct: 78  SQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 137

Query: 68  HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 127
           HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD
Sbjct: 138 HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 197

Query: 128 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 187
           LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT
Sbjct: 198 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 257

Query: 188 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 247
           ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY
Sbjct: 258 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 317

Query: 248 IPLI----IPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVDMQ 300
           IPLI    +PGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV  Q
Sbjct: 318 IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQ 374


>gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens]
          Length = 450

 Score =  578 bits (1489), Expect = e-165
 Identities = 288/297 (96%), Positives = 290/297 (97%), Gaps = 5/297 (1%)

Query: 8   TQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 67
           +QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA
Sbjct: 78  SQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 137

Query: 68  HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 127
           HGEQSSNSPSTQNGSLT TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD
Sbjct: 138 HGEQSSNSPSTQNGSLT-TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 196

Query: 128 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 187
           LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT
Sbjct: 197 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 256

Query: 188 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 247
           ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY
Sbjct: 257 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 316

Query: 248 IPLI----IPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVDMQ 300
           IPLI    +PGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV  Q
Sbjct: 317 IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQ 373


>gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]
          Length = 395

 Score =  363 bits (932), Expect = e-100
 Identities = 207/330 (62%), Positives = 224/330 (67%), Gaps = 19/330 (5%)

Query: 9   QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
           QGNQE    PD M QP+ +  F PP QNGIP EY  PH     +Y GQT   EH L LY 
Sbjct: 29  QGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 87

Query: 64  STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 121
             Q H EQS    S  T +G+ TQT+  A TDGQ  QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 88  PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 146

Query: 122 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 181
           RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 147 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 206

Query: 182 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 239
           EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA +    QA+    +  + P S
Sbjct: 207 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 266

Query: 240 GRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVD 298
                       +PGFPYP AAT AAA+RGAHLRGRGRTVY   R A PP  IPAY GV 
Sbjct: 267 ------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVV 319

Query: 299 MQPTDMHSLLLQPQPPLLQPLQPLTVTVMA 328
            Q     + LLQ      +  QP   T  A
Sbjct: 320 YQEPVYGNKLLQGGYAAYRYAQPTPATAAA 349


>gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]
          Length = 392

 Score =  363 bits (932), Expect = e-100
 Identities = 207/330 (62%), Positives = 224/330 (67%), Gaps = 19/330 (5%)

Query: 9   QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
           QGNQE    PD M QP+ +  F PP QNGIP EY  PH     +Y GQT   EH L LY 
Sbjct: 29  QGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 87

Query: 64  STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 121
             Q H EQS    S  T +G+ TQT+  A TDGQ  QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 88  PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 146

Query: 122 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 181
           RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 147 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 206

Query: 182 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 239
           EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA +    QA+    +  + P S
Sbjct: 207 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 266

Query: 240 GRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVD 298
                       +PGFPYP AAT AAA+RGAHLRGRGRTVY   R A PP  IPAY GV 
Sbjct: 267 ------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVV 319

Query: 299 MQPTDMHSLLLQPQPPLLQPLQPLTVTVMA 328
            Q     + LLQ      +  QP   T  A
Sbjct: 320 YQEPVYGNKLLQGGYAAYRYAQPTPATAAA 349


>gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]
          Length = 418

 Score =  363 bits (932), Expect = e-100
 Identities = 207/330 (62%), Positives = 224/330 (67%), Gaps = 19/330 (5%)

Query: 9   QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
           QGNQE    PD M QP+ +  F PP QNGIP EY  PH     +Y GQT   EH L LY 
Sbjct: 29  QGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 87

Query: 64  STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 121
             Q H EQS    S  T +G+ TQT+  A TDGQ  QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 88  PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 146

Query: 122 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 181
           RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 147 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 206

Query: 182 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 239
           EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA +    QA+    +  + P S
Sbjct: 207 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 266

Query: 240 GRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVD 298
                       +PGFPYP AAT AAA+RGAHLRGRGRTVY   R A PP  IPAY GV 
Sbjct: 267 ------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVV 319

Query: 299 MQPTDMHSLLLQPQPPLLQPLQPLTVTVMA 328
            Q     + LLQ      +  QP   T  A
Sbjct: 320 YQEPVYGNKLLQGGYAAYRYAQPTPATAAA 349


>gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
          Length = 397

 Score =  358 bits (919), Expect = 4e-99
 Identities = 199/302 (65%), Positives = 215/302 (71%), Gaps = 19/302 (6%)

Query: 9   QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
           +GNQE    PD M QP+ +  F PP QNGIP EY  PH     +Y GQT   EH L LY 
Sbjct: 9   RGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 67

Query: 64  STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 121
             Q H EQS    S  T +G+ TQT+  A TDGQ  QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 68  PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 126

Query: 122 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 181
           RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 127 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 186

Query: 182 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 239
           EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA +    QA+    +  + P S
Sbjct: 187 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 246

Query: 240 GRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVD 298
                       +PGFPYP AAT AAA+RGAHLRGRGRTVY   R A PP  IPAY GV 
Sbjct: 247 ------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVV 299

Query: 299 MQ 300
            Q
Sbjct: 300 YQ 301


>gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
          Length = 397

 Score =  358 bits (919), Expect = 4e-99
 Identities = 199/302 (65%), Positives = 215/302 (71%), Gaps = 19/302 (6%)

Query: 9   QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
           +GNQE    PD M QP+ +  F PP QNGIP EY  PH     +Y GQT   EH L LY 
Sbjct: 9   RGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 67

Query: 64  STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 121
             Q H EQS    S  T +G+ TQT+  A TDGQ  QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 68  PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 126

Query: 122 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 181
           RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 127 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 186

Query: 182 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 239
           EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA +    QA+    +  + P S
Sbjct: 187 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 246

Query: 240 GRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVD 298
                       +PGFPYP AAT AAA+RGAHLRGRGRTVY   R A PP  IPAY GV 
Sbjct: 247 ------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVV 299

Query: 299 MQ 300
            Q
Sbjct: 300 YQ 301


>gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]
          Length = 370

 Score =  353 bits (907), Expect = 1e-97
 Identities = 195/300 (65%), Positives = 207/300 (69%), Gaps = 42/300 (14%)

Query: 9   QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
           +GNQE    PD M QP+ +  F PP QNGIP EY  PH     +Y GQT   EH L LY 
Sbjct: 9   RGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 67

Query: 64  STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 121
             Q H EQS    S  T +G+ TQT+  A TDGQ  QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 68  PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 126

Query: 122 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 181
           RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 127 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 186

Query: 182 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR 241
           EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA                     
Sbjct: 187 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYA--------------------- 225

Query: 242 GGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVDMQ 300
                     +PGFPYP AAT AAA+RGAHLRGRGRTVY   R A PP  IPAY GV  Q
Sbjct: 226 ----------VPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQ 274


>gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens]
          Length = 312

 Score =  310 bits (795), Expect = 1e-84
 Identities = 173/291 (59%), Positives = 188/291 (64%), Gaps = 46/291 (15%)

Query: 21  MVQPFTTIPFPPPPQNGIPTEYGVPH---TQDYAGQTG---EHNLTLYGSTQAHGEQSSN 74
           M QP+    +PPPPQNGIP EY  P    TQDY+GQT    EH +TLY   Q H EQ  +
Sbjct: 1   MAQPYPPAQYPPPPQNGIPAEYAPPPPHPTQDYSGQTPVPTEHGMTLYTPAQTHPEQPGS 60

Query: 75  SPSTQ----NGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQ 130
             STQ      ++ QT+  AQTD   SQ     +   K  PKRLHVSNIPFRFRDPDLRQ
Sbjct: 61  EASTQPIAGTQTVPQTDEAAQTD---SQPLHPSDPTEKQQPKRLHVSNIPFRFRDPDLRQ 117

Query: 131 MFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARV 190
           MFGQFGKILDVEIIFNERGSKGFGFVTFE S+DADRAREKL+GT+VEGRKIEVNNATARV
Sbjct: 118 MFGQFGKILDVEIIFNERGSKGFGFVTFETSSDADRAREKLNGTIVEGRKIEVNNATARV 177

Query: 191 MTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTYIPL 250
           MTNKK   PY NGWKL+PVVGAVYGPE YA                              
Sbjct: 178 MTNKKTGNPYTNGWKLNPVVGAVYGPEFYA------------------------------ 207

Query: 251 IIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAV-PPTAIPAYPGVDMQ 300
            + GFPYPT   TA A+RGAHLRGRGR VY   RA  PP  IP Y  V  Q
Sbjct: 208 -VTGFPYPTTG-TAVAYRGAHLRGRGRAVYNTFRAAPPPPPIPTYGAVVYQ 256


>gi|189181654 deleted in azoospermia [Homo sapiens]
          Length = 744

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 22/184 (11%)

Query: 22  VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 81
           VQP   +  PPPP       +  P+T+ Y     +  +T    TQ    QS+ +P T N 
Sbjct: 124 VQPRPLVVNPPPPPQ-FQNVWRNPNTETYL----QPQITPNPVTQH--VQSAANPETPNS 176

Query: 82  SLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKI 138
           ++++     +   Q S   +S+     E K  P  + V  I  R  + ++   FG++G +
Sbjct: 177 TISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSV 231

Query: 139 LDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATARVMTNKK 195
            +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +     +
Sbjct: 232 KEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRKQKLCAR 287

Query: 196 MVTP 199
            V P
Sbjct: 288 HVQP 291



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 22/184 (11%)

Query: 22  VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 81
           VQP   +  PPPP       +  P+T+ Y     +  +T    TQ    QS+ +P T N 
Sbjct: 289 VQPRPLVVNPPPPPQ-FQNVWRNPNTETYL----QPQITPNPVTQH--VQSAANPETPNS 341

Query: 82  SLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKI 138
           ++++     +   Q S   +S+     E K  P  + V  I  R  + ++   FG++G +
Sbjct: 342 TISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSV 396

Query: 139 LDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATARVMTNKK 195
            +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +     +
Sbjct: 397 KEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRKQKLCAR 452

Query: 196 MVTP 199
            V P
Sbjct: 453 HVQP 456



 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 15/134 (11%)

Query: 72  SSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDL 128
           S+ +P T N ++++     +   Q S   +S+     E K  P  + V  I  R  + ++
Sbjct: 2   SAANPETPNSTISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEI 56

Query: 129 RQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNN 185
              FG++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  
Sbjct: 57  GSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGP 112

Query: 186 ATARVMTNKKMVTP 199
           A  +     + V P
Sbjct: 113 AIRKQKLCARHVQP 126


>gi|54292113 deleted in azoospermia 4 isoform 1 [Homo sapiens]
          Length = 579

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 22/184 (11%)

Query: 22  VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 81
           VQP   +  PPPP       +  P+T+ Y     +  +T    TQ    QS+ +P T N 
Sbjct: 124 VQPRPLVVNPPPPPQ-FQNVWRNPNTETYL----QPQITPNPVTQH--VQSAANPETPNS 176

Query: 82  SLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKI 138
           ++++     +   Q S   +S+     E K  P  + V  I  R  + ++   FG++G +
Sbjct: 177 TISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSV 231

Query: 139 LDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATARVMTNKK 195
            +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +     +
Sbjct: 232 KEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRKQKLCAR 287

Query: 196 MVTP 199
            V P
Sbjct: 288 HVQP 291



 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 15/134 (11%)

Query: 72  SSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDL 128
           S+ +P T N ++++     +   Q S   +S+     E K  P  + V  I  R  + ++
Sbjct: 2   SAANPETPNSTISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEI 56

Query: 129 RQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNN 185
              FG++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  
Sbjct: 57  GSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGP 112

Query: 186 ATARVMTNKKMVTP 199
           A  +     + V P
Sbjct: 113 AIRKQKLCARHVQP 126


>gi|62244004 modulator of estrogen induced transcription isoform b
           [Homo sapiens]
          Length = 1016

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 10/122 (8%)

Query: 64  STQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRF 123
           ST A G+  S+S  +++   +  +    T        SS +  S S+ K + VS +    
Sbjct: 326 STGASGQAKSSSKESKDSKTSSKDDKGST--------SSTSGSSGSSTKNIWVSGLSSNT 377

Query: 124 RDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKI 181
           +  DL+ +FG++GK+L  +++ N R  G+K +G VT  +S +  R    LH T + G+ I
Sbjct: 378 KAADLKNLFGKYGKVLSAKVVTNARSPGAKCYGIVTMSSSTEVSRCIAHLHRTELHGQLI 437

Query: 182 EV 183
            V
Sbjct: 438 SV 439


>gi|63176611 modulator of estrogen induced transcription isoform a
           [Homo sapiens]
          Length = 1034

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 10/122 (8%)

Query: 64  STQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRF 123
           ST A G+  S+S  +++   +  +    T        SS +  S S+ K + VS +    
Sbjct: 344 STGASGQAKSSSKESKDSKTSSKDDKGST--------SSTSGSSGSSTKNIWVSGLSSNT 395

Query: 124 RDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKI 181
           +  DL+ +FG++GK+L  +++ N R  G+K +G VT  +S +  R    LH T + G+ I
Sbjct: 396 KAADLKNLFGKYGKVLSAKVVTNARSPGAKCYGIVTMSSSTEVSRCIAHLHRTELHGQLI 455

Query: 182 EV 183
            V
Sbjct: 456 SV 457


>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
          Length = 378

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 72/278 (25%), Positives = 110/278 (39%), Gaps = 40/278 (14%)

Query: 69  GEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDL 128
           G      P T  G   Q E     +G Q   +S +NS+S     ++ V  IP    + +L
Sbjct: 77  GRNIDPKPCTPRGM--QPERTRPKEGWQKGPRS-DNSKSN----KIFVGGIPHNCGETEL 129

Query: 129 RQMFGQFGKILDVEIIFN--ERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 186
           R+ F +FG + +V +I++  ++  +GFGF+TFE+    D+A   +H   + G+K+EV  A
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA-VNMHFHDIMGKKVEVKRA 188

Query: 187 TARVMTNK------------KMVTPYANGW--KLSPVVGAVYGPELYAASSFQADVSLGN 232
             R   ++            ++V   ANGW  +  P     YGP+     + QA    G 
Sbjct: 189 EPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG- 247

Query: 233 DAAVPLSGRGG------INTYIPLIIP-GFPYPTAATTAAAFRGAHLRGRG-----RTVY 280
               P +GRG         +YI    P GFP P               G G        +
Sbjct: 248 ---PPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQF 304

Query: 281 GAVRAVPPTAIPAYPGVDMQPTDMHSLLLQPQPPLLQP 318
                 PP A P    +   P    +     +PP  QP
Sbjct: 305 APPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQP 342


>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
          Length = 407

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 72/278 (25%), Positives = 110/278 (39%), Gaps = 40/278 (14%)

Query: 69  GEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDL 128
           G      P T  G   Q E     +G Q   +S +NS+S     ++ V  IP    + +L
Sbjct: 77  GRNIDPKPCTPRGM--QPERTRPKEGWQKGPRS-DNSKSN----KIFVGGIPHNCGETEL 129

Query: 129 RQMFGQFGKILDVEIIFN--ERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 186
           R+ F +FG + +V +I++  ++  +GFGF+TFE+    D+A   +H   + G+K+EV  A
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA-VNMHFHDIMGKKVEVKRA 188

Query: 187 TARVMTNK------------KMVTPYANGW--KLSPVVGAVYGPELYAASSFQADVSLGN 232
             R   ++            ++V   ANGW  +  P     YGP+     + QA    G 
Sbjct: 189 EPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG- 247

Query: 233 DAAVPLSGRGG------INTYIPLIIP-GFPYPTAATTAAAFRGAHLRGRG-----RTVY 280
               P +GRG         +YI    P GFP P               G G        +
Sbjct: 248 ---PPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQF 304

Query: 281 GAVRAVPPTAIPAYPGVDMQPTDMHSLLLQPQPPLLQP 318
                 PP A P    +   P    +     +PP  QP
Sbjct: 305 APPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQP 342



 Score = 28.5 bits (62), Expect = 10.0
 Identities = 26/87 (29%), Positives = 30/87 (34%), Gaps = 8/87 (9%)

Query: 10  GNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ-DYA-GQTGEHNLTLYGSTQA 67
           G   P  TP A       + FPPPP    P     P  Q D+  GQ   +   L G  Q 
Sbjct: 308 GVPPPPATPGA-----APLAFPPPPSQAAPDMSKPPTAQPDFPYGQYAGYGQDLSGFGQG 362

Query: 68  HGEQSSNSPSTQNGSLTQTEGGAQTDG 94
             + S   PS   G      GG    G
Sbjct: 363 FSDPSQQPPS-YGGPSVPGSGGPPAGG 388


>gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens]
          Length = 524

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 2/102 (1%)

Query: 90  AQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN-ER 148
           +Q +  ++   ++   +  + P RL+V ++ F   +  LR +F  FG+I  ++++ + E 
Sbjct: 228 SQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287

Query: 149 G-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATAR 189
           G SKG+GF+TF +S  A +A E+L+G  + GR ++V + T R
Sbjct: 288 GRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329


>gi|35493811 RNA binding motif protein 39 isoform a [Homo sapiens]
          Length = 530

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 2/102 (1%)

Query: 90  AQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN-ER 148
           +Q +  ++   ++   +  + P RL+V ++ F   +  LR +F  FG+I  ++++ + E 
Sbjct: 228 SQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287

Query: 149 G-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATAR 189
           G SKG+GF+TF +S  A +A E+L+G  + GR ++V + T R
Sbjct: 288 GRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329


>gi|37574731 boule isoform 1 [Homo sapiens]
          Length = 295

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 19/149 (12%)

Query: 85  QTEGGAQTDGQQSQTQSSENSESKST----------------PKRLHVSNIPFRFRDPDL 128
           +TE G QT  Q      S +    S                 P R+ V  I F+  + DL
Sbjct: 2   ETESGPQTSNQMQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDL 61

Query: 129 RQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 187
           R+ F Q+G + +V+I+ +  G SKG+GFVTFE   DA +  ++      + +K+ +  A 
Sbjct: 62  RKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAI 121

Query: 188 AR--VMTNKKMVTPYANGWKLSPVVGAVY 214
            +  V   +  + P A    L+   G  Y
Sbjct: 122 RKQQVGIPRSSIMPAAGTMYLTTSTGYPY 150


>gi|45238849 poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
          Length = 631

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 96  QSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFG 154
           + + ++   + +K  P  +++ N      D  L+ +FG+FG  L V+++ +E G SKGFG
Sbjct: 176 RKEREAELGARAKEFPN-VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFG 234

Query: 155 FVTFENSADADRAREKLHGTVVEGRKIEVNNATARV 190
           FV+FE   DA +A ++++G  + G++I V  A  +V
Sbjct: 235 FVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270



 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 29/82 (35%), Positives = 44/82 (53%)

Query: 108 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 167
           KS    + V N+     +  L      FG IL   ++ +E GSKG+GFV FE    A+RA
Sbjct: 95  KSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERA 154

Query: 168 REKLHGTVVEGRKIEVNNATAR 189
            +K++G ++ GRK+ V    +R
Sbjct: 155 IKKMNGMLLNGRKVFVGQFKSR 176



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 26/93 (27%), Positives = 49/93 (52%)

Query: 91  QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 150
           QT+ +++  Q  ++  ++     L+V N+     D  LR+ F  FG I   +++     S
Sbjct: 273 QTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRS 332

Query: 151 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
           KGFGFV F +  +A +A  +++G +V  + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365


>gi|208431836 poly A binding protein, cytoplasmic 4 isoform 3 [Homo
           sapiens]
          Length = 631

 Score = 58.9 bits (141), Expect = 7e-09
 Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 114 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 172
           +++ N      D  L+++F QFGK L V+++ +  G SKGFGFV++E   DA++A E+++
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252

Query: 173 GTVVEGRKIEVNNATARV 190
           G  + G+ I V  A  +V
Sbjct: 253 GKEISGKIIFVGRAQKKV 270



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 28/82 (34%), Positives = 44/82 (53%)

Query: 108 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 167
           KS    + + N+     +  L   F  FG IL  +++ +E GSKG+ FV FE    AD+A
Sbjct: 95  KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKA 154

Query: 168 REKLHGTVVEGRKIEVNNATAR 189
            EK++G ++  RK+ V    +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 25/93 (26%), Positives = 47/93 (50%)

Query: 91  QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 150
           Q + ++   Q  +   S+     L++ N+     D  LR+ F  FG I   +++  +  S
Sbjct: 273 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332

Query: 151 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
           KGFGFV F +  +A +A  +++G +V  + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365



 Score = 37.4 bits (85), Expect = 0.021
 Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 104 NSESKSTPKR-LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFEN 160
           N+ + S P   L+V ++     +  L + F   G +L + +  +   R S G+ +V F+ 
Sbjct: 2   NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 161 SADADRAREKLHGTVVEGRKIEV 183
            ADA+RA + ++  V++G+ I +
Sbjct: 62  PADAERALDTMNFDVIKGKPIRI 84


>gi|4504715 poly A binding protein, cytoplasmic 4 isoform 2 [Homo
           sapiens]
          Length = 644

 Score = 58.9 bits (141), Expect = 7e-09
 Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 114 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 172
           +++ N      D  L+++F QFGK L V+++ +  G SKGFGFV++E   DA++A E+++
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252

Query: 173 GTVVEGRKIEVNNATARV 190
           G  + G+ I V  A  +V
Sbjct: 253 GKEISGKIIFVGRAQKKV 270



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 28/82 (34%), Positives = 44/82 (53%)

Query: 108 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 167
           KS    + + N+     +  L   F  FG IL  +++ +E GSKG+ FV FE    AD+A
Sbjct: 95  KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKA 154

Query: 168 REKLHGTVVEGRKIEVNNATAR 189
            EK++G ++  RK+ V    +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 25/93 (26%), Positives = 47/93 (50%)

Query: 91  QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 150
           Q + ++   Q  +   S+     L++ N+     D  LR+ F  FG I   +++  +  S
Sbjct: 273 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332

Query: 151 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
           KGFGFV F +  +A +A  +++G +V  + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365



 Score = 37.4 bits (85), Expect = 0.021
 Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 104 NSESKSTPKR-LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFEN 160
           N+ + S P   L+V ++     +  L + F   G +L + +  +   R S G+ +V F+ 
Sbjct: 2   NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 161 SADADRAREKLHGTVVEGRKIEV 183
            ADA+RA + ++  V++G+ I +
Sbjct: 62  PADAERALDTMNFDVIKGKPIRI 84


>gi|208431833 poly A binding protein, cytoplasmic 4 isoform 1 [Homo
           sapiens]
          Length = 660

 Score = 58.9 bits (141), Expect = 7e-09
 Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 114 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 172
           +++ N      D  L+++F QFGK L V+++ +  G SKGFGFV++E   DA++A E+++
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252

Query: 173 GTVVEGRKIEVNNATARV 190
           G  + G+ I V  A  +V
Sbjct: 253 GKEISGKIIFVGRAQKKV 270



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 28/82 (34%), Positives = 44/82 (53%)

Query: 108 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 167
           KS    + + N+     +  L   F  FG IL  +++ +E GSKG+ FV FE    AD+A
Sbjct: 95  KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKA 154

Query: 168 REKLHGTVVEGRKIEVNNATAR 189
            EK++G ++  RK+ V    +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 25/93 (26%), Positives = 47/93 (50%)

Query: 91  QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 150
           Q + ++   Q  +   S+     L++ N+     D  LR+ F  FG I   +++  +  S
Sbjct: 273 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332

Query: 151 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
           KGFGFV F +  +A +A  +++G +V  + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365



 Score = 37.4 bits (85), Expect = 0.021
 Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 104 NSESKSTPKR-LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFEN 160
           N+ + S P   L+V ++     +  L + F   G +L + +  +   R S G+ +V F+ 
Sbjct: 2   NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 161 SADADRAREKLHGTVVEGRKIEV 183
            ADA+RA + ++  V++G+ I +
Sbjct: 62  PADAERALDTMNFDVIKGKPIRI 84


>gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
          Length = 636

 Score = 58.5 bits (140), Expect = 9e-09
 Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 114 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 172
           +++ N      D  L+ +FG+FG  L V+++ +E G SKGFGFV+FE   DA +A ++++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252

Query: 173 GTVVEGRKIEVNNATARV 190
           G  + G++I V  A  +V
Sbjct: 253 GKELNGKQIYVGRAQKKV 270



 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 29/82 (35%), Positives = 45/82 (54%)

Query: 108 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 167
           KS    + + N+     +  L   F  FG IL  +++ +E GSKG+GFV FE    A+RA
Sbjct: 95  KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERA 154

Query: 168 REKLHGTVVEGRKIEVNNATAR 189
            EK++G ++  RK+ V    +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176



 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 26/93 (27%), Positives = 48/93 (51%)

Query: 91  QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 150
           QT+ ++   Q  ++  ++     L+V N+     D  LR+ F  FG I   +++     S
Sbjct: 273 QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRS 332

Query: 151 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
           KGFGFV F +  +A +A  +++G +V  + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365



 Score = 35.8 bits (81), Expect = 0.062
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 114 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFENSADADRAREKL 171
           L+V ++     +  L + F   G IL + +  +   R S G+ +V F+  ADA+RA + +
Sbjct: 13  LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72

Query: 172 HGTVVEGRKIEV 183
           +  V++G+ + +
Sbjct: 73  NFDVIKGKPVRI 84


>gi|14719414 boule isoform 2 [Homo sapiens]
          Length = 283

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 111 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 169
           P R+ V  I F+  + DLR+ F Q+G + +V+I+ +  G SKG+GFVTFE   DA +  +
Sbjct: 32  PNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQ 91

Query: 170 KLHGTVVEGRKIEVNNATAR--VMTNKKMVTPYANGWKLSPVVGAVY 214
           +      + +K+ +  A  +  V   +  + P A    L+   G  Y
Sbjct: 92  EAEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGYPY 138


>gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]
          Length = 288

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 16/97 (16%)

Query: 104 NSESKSTPKRLHVSN--------------IPFRFRDPDLRQMFGQFGKILDVEIIFNE-- 147
           +S S  + +R HV N              +     + DLR++F ++G I DV I++++  
Sbjct: 96  HSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQS 155

Query: 148 RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVN 184
           R S+GF FV FEN  DA  A+E+ +G  ++GR+I V+
Sbjct: 156 RRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192


>gi|116734698 RNA binding motif protein 23 isoform 3 [Homo sapiens]
          Length = 405

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 35/207 (16%)

Query: 90  AQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 149
           +Q +  +    ++   +    P RL+V ++ F   +  LR +F  FGKI ++ ++ +   
Sbjct: 207 SQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDT 266

Query: 150 --SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLS 207
             SKG+GF+TF +S  A RA E+L+G  + GR + V + T R+     +  P  +     
Sbjct: 267 GRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGD----- 321

Query: 208 PVVGAVYGPEL---YAASSFQADVSLGNDAAVPLSGRGGINTYIPLIIPGFPYPTAATTA 264
                    EL    A   FQ    L   A + L                 P   AA  A
Sbjct: 322 --------QELDLGSAGGRFQLMAKLAEGAGIQL-----------------PSTAAAAAA 356

Query: 265 AAFRGAHLRGRGRTVYGAVRAVPPTAI 291
           AA + A L+  G    GA+     TA+
Sbjct: 357 AAAQAAALQLNGAVPLGALNPAALTAL 383


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.131    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,403,794
Number of Sequences: 37866
Number of extensions: 874903
Number of successful extensions: 4311
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 3422
Number of HSP's gapped (non-prelim): 924
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.