A2BP1 15065

Name: A2BP1	Sequence: fasta or formatted (418aa)		NCBI GI: 22538405
Description: ataxin 2-binding protein 1 isoform 1		Referenced in: Cerebellum Gene Structure RNA-binding Proteins
Other entries for this name: alt prot [370aa] ataxin 2-binding protein 1 isoform 5 alt prot [397aa] ataxin 2-binding protein 1 isoform 4 alt prot [397aa] ataxin 2-binding protein 1 isoform 4 alt prot [392aa] ataxin 2-binding protein 1 isoform 2 alt prot [395aa] ataxin 2-binding protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.4 60 4 C cysteine 0.2 1 1 D aspartate 3.6 15 2 E glutamate 3.8 16 1 F phenylalanine 3.3 14 1 G glycine 8.1 34 2 H histidine 2.6 11 2 I isoleucine 2.4 10 2 K lysine 2.6 11 2 L leucine 5.5 23 2 M methionine 1.9 8 1 N asparagine 4.5 19 2 P proline 10.5 44 4 Q glutamine 5.5 23 1 R arginine 4.5 19 1 S serine 5.7 24 2 T threonine 7.4 31 2 V valine 6.2 26 2 W tryptophan 0.2 1 1 Y tyrosine 6.7 28 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ataxin 2-binding protein 1 isoform 1 A2BP1 0.923 ataxin 2-binding protein 1 isoform 2 A2BP1 0.906 ataxin 2-binding protein 1 isoform 4 A2BP1 0.906 ataxin 2-binding protein 1 isoform 4 A2BP1 0.839 ataxin 2-binding protein 1 isoform 3 A2BP1 0.825 ataxin 2-binding protein 1 isoform 5 HRNBP3 0.519 hexaribonucleotide binding protein 3 RBM9 0.510 RNA binding motif protein 9 isoform 5 RBM9 0.502 RNA binding motif protein 9 isoform 6 RBM9 0.502 RNA binding motif protein 9 isoform 1 RBM9 0.499 RNA binding motif protein 9 isoform 3 RBM9 0.406 RNA binding motif protein 9 isoform 2 RBM9 0.400 RNA binding motif protein 9 isoform 4 DAZAP1 0.046 DAZ associated protein 1 isoform a DAZAP1 0.046 DAZ associated protein 1 isoform b BOLL 0.044 boule isoform 1 BOLL 0.043 boule isoform 2 SFPQ 0.042 splicing factor proline/glutamine rich (polypyrimidin... PABPC4 0.041 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.041 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.041 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC3 0.041 poly(A) binding protein, cytoplasmic 3 TRA2B 0.041 splicing factor, arginine/serine-rich 10 PABPC1 0.041 poly(A) binding protein, cytoplasmic 1 RBM39 0.038 RNA binding motif protein 39 isoform b RBM39 0.038 RNA binding motif protein 39 isoform a DAZ1 0.038 deleted in azoospermia DAZ4 0.038 deleted in azoospermia 4 isoform 1 BRUNOL5 0.038 bruno-like 5, RNA binding protein isoform 1 TIA1 0.037 TIA1 protein isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.