Guide to the Human Genome
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Search of human proteins with 7656971

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7656971 phosphonoformate immuno-associated protein 5 isoform
2 [Homo sapiens]
         (583 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7656971 phosphonoformate immuno-associated protein 5 isoform ...  1240   0.0  
gi|157278100 phosphonoformate immuno-associated protein 5 isofor...   221   1e-57
gi|31742492 Nedd4 binding protein 2 [Homo sapiens]                    184   3e-46
gi|119226224 NEDD4 binding protein 2-like 1 isoform 1 [Homo sapi...   167   3e-41
gi|119226227 NEDD4 binding protein 2-like 1 isoform 2 [Homo sapi...   108   1e-23
gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo s...    60   4e-09
gi|146134388 YLP motif containing 1 [Homo sapiens]                     46   1e-04
gi|125988409 RED protein [Homo sapiens]                                40   0.008
gi|34878716 paired box protein 2 isoform d [Homo sapiens]              39   0.013
gi|4885245 FOS-like antigen 2 [Homo sapiens]                           37   0.065
gi|56676397 ankyrin repeat domain 11 [Homo sapiens]                    37   0.065
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo...    36   0.11 
gi|239757343 PREDICTED: hypothetical protein XP_002345253 [Homo ...    35   0.15 
gi|88759348 ring finger protein 219 [Homo sapiens]                     35   0.15 
gi|13376808 platelet derived growth factor D isoform 1 precursor...    35   0.19 
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    35   0.19 
gi|93102379 low density lipoprotein-related protein 1B precursor...    35   0.25 
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    34   0.42 
gi|7705971 leucine zipper protein 4 [Homo sapiens]                     34   0.42 
gi|41281453 serine/threonine kinase 2 [Homo sapiens]                   34   0.42 
gi|33946313 ninein isoform 4 [Homo sapiens]                            34   0.42 
gi|33946321 ninein isoform 5 [Homo sapiens]                            34   0.42 
gi|148536871 ninein isoform 1 [Homo sapiens]                           34   0.42 
gi|148536869 ninein isoform 2 [Homo sapiens]                           34   0.42 
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ...    34   0.42 
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             34   0.42 
gi|221219020 NYD-SP11 protein [Homo sapiens]                           33   0.55 
gi|55770834 centromere protein F [Homo sapiens]                        33   0.72 
gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]    33   0.72 
gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B is...    33   0.95 

>gi|7656971 phosphonoformate immuno-associated protein 5 isoform 2
           [Homo sapiens]
          Length = 583

 Score = 1240 bits (3209), Expect = 0.0
 Identities = 583/583 (100%), Positives = 583/583 (100%)

Query: 1   MSYGEIEGKFLGPREEVTSEPRCKKLKSTTESYVFHNHSNADFHRIQEKTGNDWVPVTII 60
           MSYGEIEGKFLGPREEVTSEPRCKKLKSTTESYVFHNHSNADFHRIQEKTGNDWVPVTII
Sbjct: 1   MSYGEIEGKFLGPREEVTSEPRCKKLKSTTESYVFHNHSNADFHRIQEKTGNDWVPVTII 60

Query: 61  DVRGHSYLQENKIKTTDLHRPLHDEMPGNRPDVIESIDSQVLQEARPPLVSADDEIYSTS 120
           DVRGHSYLQENKIKTTDLHRPLHDEMPGNRPDVIESIDSQVLQEARPPLVSADDEIYSTS
Sbjct: 61  DVRGHSYLQENKIKTTDLHRPLHDEMPGNRPDVIESIDSQVLQEARPPLVSADDEIYSTS 120

Query: 121 KAFIGPIYKPPEKKKRNEGRNEAHVLNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIE 180
           KAFIGPIYKPPEKKKRNEGRNEAHVLNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIE
Sbjct: 121 KAFIGPIYKPPEKKKRNEGRNEAHVLNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIE 180

Query: 181 ELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGLLKPDEEKKDLSNKAMPSHCDYQQNLG 240
           ELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGLLKPDEEKKDLSNKAMPSHCDYQQNLG
Sbjct: 181 ELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGLLKPDEEKKDLSNKAMPSHCDYQQNLG 240

Query: 241 NEPDKYPCNGQVIPTFCDTSFTSFRPEWQSVYPFIVPYGPPLPSLNYHLNIQRFSGPPNP 300
           NEPDKYPCNGQVIPTFCDTSFTSFRPEWQSVYPFIVPYGPPLPSLNYHLNIQRFSGPPNP
Sbjct: 241 NEPDKYPCNGQVIPTFCDTSFTSFRPEWQSVYPFIVPYGPPLPSLNYHLNIQRFSGPPNP 300

Query: 301 PSNIFQAQDDSQIQNGYYVNNCHVNWNCMTFDQNNEYTDCSENRSSVHPSGNGCSMQDRY 360
           PSNIFQAQDDSQIQNGYYVNNCHVNWNCMTFDQNNEYTDCSENRSSVHPSGNGCSMQDRY
Sbjct: 301 PSNIFQAQDDSQIQNGYYVNNCHVNWNCMTFDQNNEYTDCSENRSSVHPSGNGCSMQDRY 360

Query: 361 VSNGFCEVRERCWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSR 420
           VSNGFCEVRERCWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSR
Sbjct: 361 VSNGFCEVRERCWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSR 420

Query: 421 ILLGQNRDGIVFSTDDYFHHQDGYRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNI 480
           ILLGQNRDGIVFSTDDYFHHQDGYRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNI
Sbjct: 421 ILLGQNRDGIVFSTDDYFHHQDGYRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNI 480

Query: 481 QAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMS 540
           QAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMS
Sbjct: 481 QAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMS 540

Query: 541 ISIVMNSVEPSHKSTQRPPPPQGRQRWGGSLGSHNRVCVTNNH 583
           ISIVMNSVEPSHKSTQRPPPPQGRQRWGGSLGSHNRVCVTNNH
Sbjct: 541 ISIVMNSVEPSHKSTQRPPPPQGRQRWGGSLGSHNRVCVTNNH 583


>gi|157278100 phosphonoformate immuno-associated protein 5 isoform 1
           [Homo sapiens]
          Length = 752

 Score =  221 bits (564), Expect = 1e-57
 Identities = 105/105 (100%), Positives = 105/105 (100%)

Query: 462 AKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKH 521
           AKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKH
Sbjct: 33  AKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKH 92

Query: 522 GVSRKKIAQMLDRYEYQMSISIVMNSVEPSHKSTQRPPPPQGRQR 566
           GVSRKKIAQMLDRYEYQMSISIVMNSVEPSHKSTQRPPPPQGRQR
Sbjct: 93  GVSRKKIAQMLDRYEYQMSISIVMNSVEPSHKSTQRPPPPQGRQR 137


>gi|31742492 Nedd4 binding protein 2 [Homo sapiens]
          Length = 1770

 Score =  184 bits (466), Expect = 3e-46
 Identities = 84/160 (52%), Positives = 119/160 (74%)

Query: 391 QFQEEKLNKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIVFSTDDYFHHQDGYRYNVNQ 450
           Q   +K + +  +L+LLRGLPGSGK+ L+R L   N  G++ STDDYF+    Y+++V  
Sbjct: 429 QVVRKKTSYVGLVLVLLRGLPGSGKSFLARTLQEDNPSGVILSTDDYFYINGQYQFDVKY 488

Query: 451 LGDAHDWNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKF 510
           LG+AH+WNQNRAK+A ++  SP+IIDNTN+QAWEMKPYV ++    Y+V F EP+TWWKF
Sbjct: 489 LGEAHEWNQNRAKEAFEKKISPIIIDNTNLQAWEMKPYVALSQKHKYKVLFREPDTWWKF 548

Query: 511 DPEELEKRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEP 550
            P+EL +RN HGVS++KI +ML+ Y+  +S+ I+M+S  P
Sbjct: 549 KPKELARRNIHGVSKEKITRMLEHYQRFVSVPIIMSSSVP 588


>gi|119226224 NEDD4 binding protein 2-like 1 isoform 1 [Homo
           sapiens]
          Length = 243

 Score =  167 bits (422), Expect = 3e-41
 Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)

Query: 398 NKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIVFSTDDYFHHQDG-YRYNVNQLGDAHD 456
           +  +K L LLRGLPGSGKTTL+R L       ++FSTDD+F  +DG Y +N + L +AH+
Sbjct: 38  HSFRKHLYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHE 97

Query: 457 WNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELE 516
           WNQ RA++A+  G SP+IIDNTN+ AWEMKPY  +A+   Y V F EP+T WKF+ +EL 
Sbjct: 98  WNQKRARKAMRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELA 157

Query: 517 KRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPS 551
           +RN HGVSR+KI +M +RYE+ ++   V+++ +PS
Sbjct: 158 RRNIHGVSREKIHRMKERYEHDVTFHSVLHAEKPS 192


>gi|119226227 NEDD4 binding protein 2-like 1 isoform 2 [Homo
           sapiens]
          Length = 173

 Score =  108 bits (271), Expect = 1e-23
 Identities = 52/92 (56%), Positives = 68/92 (73%), Gaps = 1/92 (1%)

Query: 398 NKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIVFSTDDYFHHQDG-YRYNVNQLGDAHD 456
           +  +K L LLRGLPGSGKTTL+R L       ++FSTDD+F  +DG Y +N + L +AH+
Sbjct: 38  HSFRKHLYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHE 97

Query: 457 WNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPY 488
           WNQ RA++A+  G SP+IIDNTN+ AWEMKPY
Sbjct: 98  WNQKRARKAMRNGISPIIIDNTNLHAWEMKPY 129


>gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo
           sapiens]
          Length = 421

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 402 KLLILLRGLPGSGKTTLSRILLGQNRDGIVFSTDDYFHHQDGYRYNVNQLGDAHDWNQNR 461
           K L +LRGLPGSGK+TL+R+++ + RDG    + D +    G R   ++  +    +++ 
Sbjct: 50  KTLFILRGLPGSGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSE--EYKRLDEDL 107

Query: 462 AKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKH 521
           A     +    +++D+TN +   ++   E+A    Y+V   EP+T W+ D  +L+++N+ 
Sbjct: 108 AAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQW 167

Query: 522 GVSRKKIAQM 531
            +S   + ++
Sbjct: 168 QLSADDLKKL 177


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 28/160 (17%)

Query: 401  QKLLILLRGLPGSGKTTLSRILLGQNRD-----GIVFSTDDYF------HHQD------- 442
            +++++++RGLPGSGKT +++++  +  +       V S DDYF        +D       
Sbjct: 1833 ERIVVIMRGLPGSGKTHVAKLIRDKEVEFGGPAPRVLSLDDYFITEVEKEEKDPDSGKKV 1892

Query: 443  -----GYRYNVNQLGDAHDWNQNRAKQAIDQGRSP-VIIDNTNIQAWEMKPYVEVAIGKG 496
                  Y Y                K+ +D G  P +I+D  N +      +   A  KG
Sbjct: 1893 KKKVMEYEYEAEMEETYRTSMFKTFKKTLDDGFFPFIILDAINDRVRHFDQFWSAAKTKG 1952

Query: 497  YRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYE 536
            + V   E       D +   KRN HG   K+I +M D +E
Sbjct: 1953 FEVYLAEMSA----DNQTCGKRNIHGRKLKEINKMADHWE 1988


>gi|125988409 RED protein [Homo sapiens]
          Length = 557

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 42/174 (24%), Positives = 66/174 (37%), Gaps = 19/174 (10%)

Query: 55  VPVTII-------DVRGHSYLQENKIKTTDLHRPLHDEMPGNRPDVIESIDSQVLQEARP 107
           +P T+I        +   + L  N I  + L + L     G R   ++  D   L+E +P
Sbjct: 252 IPTTLIRSKADCPTMEAQTTLTTNDIVISKLTQILSYLRQGTRNKKLKKKDKGKLEEKKP 311

Query: 108 PLVSADDEIYSTSKAFIGPIYKPPEKKKRNEGRNEAHVLNGINDRGGQKEKQKFNSEKSE 167
           P   AD  I+     ++    K P  K+R   R          DR  ++E+++    + E
Sbjct: 312 P--EADMNIFEDIGDYVPSTTKTPRDKERERYRERERDRERDRDRDRERERERDRERERE 369

Query: 168 IDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGLLKPDEEK 221
            D       +E EE +K    FE    + EP      P   G    L+K   EK
Sbjct: 370 RD-------REREEEKKRHSYFEKPKVDDEPMDVDKGP---GSTKELIKSINEK 413


>gi|34878716 paired box protein 2 isoform d [Homo sapiens]
          Length = 408

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 34/258 (13%)

Query: 71  NKIKTTDLHRPLHDEMPGNRPDVIESIDSQVLQEARPPLVSA-DDEIYSTS-KAFIGPIY 128
           N+I  T + +P H    G    V     + V   A PP+ SA +D + S S    +G   
Sbjct: 136 NRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIPR 195

Query: 129 KPPEKKKRNEGRNEAHVLNGINDRGGQKEKQ-----KFNSEKSEIDNELFQ--FYKEI-- 179
              EK+KR+E  +E  V NG +  G    ++      F  ++ E  + +F+   Y ++  
Sbjct: 196 SNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPDVFQ 255

Query: 180 -EELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGLL---------KPDEEKKDLSNKAM 229
             E  K + G E S     P  ++         N  L          P    +D+++  +
Sbjct: 256 ASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMASTTL 315

Query: 230 PSHCDYQQNLGNEPDKYPCN--GQVIP-------TFCDTSFTSFRPEWQSVYPFIV--PY 278
           P +  +    G     YP +    ++P        +    +T++   W+   P ++  P 
Sbjct: 316 PGYPPHVPPTGQ--GSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEAWRFSNPALLMPPP 373

Query: 279 GPPLPSLNYHLNIQRFSG 296
           GPPLP L   +    + G
Sbjct: 374 GPPLPLLPLPMTATSYRG 391


>gi|4885245 FOS-like antigen 2 [Homo sapiens]
          Length = 326

 Score = 36.6 bits (83), Expect = 0.065
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 22/111 (19%)

Query: 81  PLHDEMPGNRPDVIESIDSQVLQEARPPLVSADDEIYSTSKAFIGPIYKPPEKKKRNEGR 140
           P H  +P  RP VI++I + V +  R   +S                   PE++++   R
Sbjct: 92  PGHMALP--RPGVIKTIGTTVGRRRRDEQLS-------------------PEEEEKRRIR 130

Query: 141 NEAHVLNGINDRGGQKE-KQKFNSEKSEIDNELFQFYKEIEELEKEKDGFE 190
            E + L     R  ++E  +K  +E  E++ E     KEI EL+KEK+  E
Sbjct: 131 RERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLE 181


>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
          Length = 2663

 Score = 36.6 bits (83), Expect = 0.065
 Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 14/146 (9%)

Query: 127 IYKPPEKKKRNEGRNE--AHVLNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIEELEK 184
           ++K  +  KR +  N+  +       DR  + EK++   EKS  + +L + YKE E  +K
Sbjct: 711 LFKDEKSLKRIKDTNKDISRSFREEKDRSNKAEKERSLKEKSPKEEKL-RLYKE-ERKKK 768

Query: 185 EKD-----GFENSCKESEPSQEQFVPFYEGHNNGLLKPDEEKKDLSNKAMPSHCDYQQNL 239
            KD       +N  KE + S+E+   F E       K  +EK    + A   +C+  Q L
Sbjct: 769 SKDRPSKLEKKNDLKEDKISKEKEKIFKEDKE----KLKKEKVYREDSAFDEYCNKNQFL 824

Query: 240 GNEPDKYP-CNGQVIPTFCDTSFTSF 264
            NE  K+   + Q    F D S +SF
Sbjct: 825 ENEDTKFSLSDDQRDRWFSDLSDSSF 850


>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
            sapiens]
          Length = 1938

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 155  QKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESE 197
            Q+ KQK   EKSE+  E+      IE L K K   E +C+  E
Sbjct: 1215 QRVKQKLEKEKSELKMEIDDMASNIEALSKSKSNIERTCRTVE 1257


>gi|239757343 PREDICTED: hypothetical protein XP_002345253 [Homo
           sapiens]
          Length = 521

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 10/62 (16%)

Query: 57  VTIIDVRGHSYLQENKIKTTDLHRPLHDEMPGNRPDVIESIDSQVLQEARPPLVSADDEI 116
           VT++DV GHS  +           PLH   PG+ P ++ ++D+ ++ +    +    D  
Sbjct: 470 VTVVDVAGHSVSRP----------PLHGTQPGDSPMILAAVDAPIMMDRLGAMKDIRDST 519

Query: 117 YS 118
           YS
Sbjct: 520 YS 521


>gi|88759348 ring finger protein 219 [Homo sapiens]
          Length = 726

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 64/272 (23%), Positives = 101/272 (37%), Gaps = 55/272 (20%)

Query: 97  IDSQVLQEARPPLVSADDEIYSTSKAFIGPIYKPPEKKKRNEG-------RNEAHVLNGI 149
           I+ + + E +  L +A+ EIY   K  +  + +  +K K   G       R +A V N  
Sbjct: 152 INPETVAEWKKKLRTAN-EIYEKVKDDVDKLKEANKKLKLENGGLVRENLRLKAEVDNRS 210

Query: 150 NDRGG-------QKEKQKFNSEKSEIDNELFQFYKEIEELE----------KEKDGFENS 192
             + G       Q + +++  E + +   L +  K IEELE          +EK+   + 
Sbjct: 211 PQKFGRFAVAALQSKVEQYERETNRLKKALERSDKYIEELESQVAQLKNSSEEKEAMNSI 270

Query: 193 C--------KESEPSQEQFVPFYEGHNNGLLKPDEEKKDLSNKAMPSH---CDYQQ---- 237
           C        K S+ S+E  V   +G ++   +P       S+ A PS    CD       
Sbjct: 271 CQTALSADGKGSKGSEEDVVSKNQG-DSARKQPGSSTSSSSHLAKPSSSRLCDTSSARQE 329

Query: 238 -------NLGNEPDKYPCNGQVIPTFCDTSF-TSFRPEWQSVYPFIVPYGP------PLP 283
                  N     D Y    +V+    DTS  T    EW +     VPY        P P
Sbjct: 330 STSKADLNCSKNKDLYQEQVEVMLDVTDTSMDTYLEREWGNKPSDCVPYKDEELYDLPAP 389

Query: 284 SLNYHLNIQRFSGPPNPPSNIFQAQDDSQIQN 315
                L+  + S P N  S++ QA    +  N
Sbjct: 390 CTPLSLSCLQLSTPENRESSVVQAGGSKKHSN 421


>gi|13376808 platelet derived growth factor D isoform 1 precursor
           [Homo sapiens]
          Length = 370

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 45/194 (23%), Positives = 71/194 (36%), Gaps = 20/194 (10%)

Query: 332 DQNNEYTDCSENRSSVHPSGNGCSMQDRYVSNGFCEVRERCWKDHCMDKHNGTDRFVNQQ 391
           D++N  TD      ++   GNG     R+  N +       W+ H  +       F NQ 
Sbjct: 41  DESNHLTDLYRRDETIQVKGNGYVQSPRF-PNSYPRNLLLTWRLHSQENTRIQLVFDNQF 99

Query: 392 FQEEKLNKL-----------QKLLILLRGLPGSGKTTLSRILLGQNRDGIVFSTDDYFHH 440
             EE  N +            +   ++RG     K    RI    N+  I F +DDYF  
Sbjct: 100 GLEEAENDICRYDFVEVEDISETSTIIRGRWCGHKEVPPRIKSRTNQIKITFKSDDYFVA 159

Query: 441 QDGYRYNVNQLGD-----AHDWNQNRAKQAID--QGRSPVIIDNTNIQAWEMKPYVEVAI 493
           + G++   + L D     A + N      +I      SP + D T I     K   E   
Sbjct: 160 KPGFKIYYSLLEDFQPAAASETNWESVTSSISGVSYNSPSVTDPTLIADALDKKIAEFDT 219

Query: 494 GKGYRVEFHEPETW 507
            +   +++  PE+W
Sbjct: 220 VEDL-LKYFNPESW 232


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
            [Homo sapiens]
          Length = 2073

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 21/208 (10%)

Query: 37   NHSNADFHRIQEKTGNDWVPVTIIDV------RGHSYLQENKIKTT----DLHRPLHDEM 86
            N+ N D   ++E + ++  P+    V      RG S  ++NK + T    +L+ P    M
Sbjct: 1222 NNMNDDSSNLKEGSKDNPEPLKCKQVWPKGTKRGLSKWRQNKERKTGFKLNLYTPPETPM 1281

Query: 87   PGNRPDVIESIDSQVLQEARPPLVSADDEIYSTSKAFIGPIYKPPEKKKRNEGRNEAHVL 146
              +    +E        +  P  +  ++E+  T +A +      P+++ R E   E    
Sbjct: 1282 EPDEQVTVEEQKETSEGKTSPSPIRIEEEVKETGEALL------PQEENRRE---ETCAP 1332

Query: 147  NGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESE--PSQEQFV 204
               N   G+K +      + E + E  +  +E EE  +E++G  N  K+ +   SQE+  
Sbjct: 1333 VSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEE 1392

Query: 205  PFYEGHNNGLLKPDEEKKDLSNKAMPSH 232
            P          + D+ +++      PSH
Sbjct: 1393 PEISTEKEDSARLDDHEEEEEEDEEPSH 1420


>gi|93102379 low density lipoprotein-related protein 1B precursor
            [Homo sapiens]
          Length = 4599

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 8/67 (11%)

Query: 320  NNCHVN-WNCMTFDQNNEYTDCSENRSSVHPSGNGCSMQDRYVSNGFCEVRERCWKDHCM 378
            NNC  + W C   D  N   DCS+N    +     C+++D   +NG C V  R W D   
Sbjct: 3486 NNCIPDHWRC---DSQN---DCSDNSDEENCKPQTCTLKDFLCANGDC-VSSRFWCDGDF 3538

Query: 379  DKHNGTD 385
            D  +G+D
Sbjct: 3539 DCADGSD 3545


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 146 LNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVP 205
           L  IN     +E+++   E+ E + E     +E E+ E+E++  E   +E E  +E+F  
Sbjct: 878 LTVININSSDEEEEEEEEEEEEEEEE----EEEEEDFEEEEEDEEEYFEEEEEEEEEFEE 933

Query: 206 FYEGHNNGLLKPDEEKKD 223
            +E    G L+ +EE++D
Sbjct: 934 EFE-EEEGELEEEEEEED 950


>gi|7705971 leucine zipper protein 4 [Homo sapiens]
          Length = 313

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 8/96 (8%)

Query: 158 KQKFNSEKSEIDNELFQFYKEIE--ELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGLL 215
           ++K N     +D+ +   YKE+E    E+EK+  +N  K+  PS++Q       H  G  
Sbjct: 20  RKKVNFLDMSLDDIII--YKELEGTNAEEEKNKRQNHSKKESPSRQQSKAHRHRHRRGYS 77

Query: 216 KPDEEKKDLSNKAMPSHCDYQQNLGNEPDKYPCNGQ 251
           +     ++ ++   PS    Q+  G +  ++P NGQ
Sbjct: 78  RCRSNSEEGNHDKKPS----QKPSGFKSGQHPLNGQ 109


>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
          Length = 1235

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 13/169 (7%)

Query: 61  DVRGHSYLQENKIKTTDLHRPLHDEMPGNRPDVIESIDSQVLQEARPPLVSADDEIYSTS 120
           ++R   +LQ+ + +     + L+ ++   R  +    + +++ + R      D EI +  
Sbjct: 830 ELRELRFLQKEEQRA---QQQLNSKLQQQREQIFRRFEQEMMSKKR----QYDQEIENLE 882

Query: 121 KAFIGPIYKPPEKKKRNEGRNEAHVLNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEI- 179
           K     I +  E++  N  R+EA  + G  ++   K +    + K E+ NE+ +  KE+ 
Sbjct: 883 KQQKQTIERL-EQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEVINEVEKAPKELR 941

Query: 180 EELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGLLKP--DEEKKDLSN 226
           +EL K +   E   +     +++FV   +   +G LK    ++K +L+N
Sbjct: 942 KELMKRRK--EELAQSQHAQEQEFVQKQQQELDGSLKKIIQQQKAELAN 988


>gi|33946313 ninein isoform 4 [Homo sapiens]
          Length = 2096

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 155  QKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGL 214
            QKEK+  NS   E + E F   +E+E  + +     +S  E+E S+ +         N L
Sbjct: 1626 QKEKEPGNSALEEREQEKFNLKEELERCKVQSSTLVSSL-EAELSEVKIQTHIVQQENHL 1684

Query: 215  LKPDEEKKDLSNKAMPSHCDYQQNLGN 241
            LK + EK    ++  P   D+QQ + +
Sbjct: 1685 LKDELEKMKQLHRC-PDLSDFQQKISS 1710


>gi|33946321 ninein isoform 5 [Homo sapiens]
          Length = 2090

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 155  QKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGL 214
            QKEK+  NS   E + E F   +E+E  + +     +S  E+E S+ +         N L
Sbjct: 1620 QKEKEPGNSALEEREQEKFNLKEELERCKVQSSTLVSSL-EAELSEVKIQTHIVQQENHL 1678

Query: 215  LKPDEEKKDLSNKAMPSHCDYQQNLGN 241
            LK + EK    ++  P   D+QQ + +
Sbjct: 1679 LKDELEKMKQLHRC-PDLSDFQQKISS 1704


>gi|148536871 ninein isoform 1 [Homo sapiens]
          Length = 2046

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 155  QKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGL 214
            QKEK+  NS   E + E F   +E+E  + +     +S  E+E S+ +         N L
Sbjct: 1620 QKEKEPGNSALEEREQEKFNLKEELERCKVQSSTLVSSL-EAELSEVKIQTHIVQQENHL 1678

Query: 215  LKPDEEKKDLSNKAMPSHCDYQQNLGN 241
            LK + EK    ++  P   D+QQ + +
Sbjct: 1679 LKDELEKMKQLHRC-PDLSDFQQKISS 1704


>gi|148536869 ninein isoform 2 [Homo sapiens]
          Length = 2133

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 155  QKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGL 214
            QKEK+  NS   E + E F   +E+E  + +     +S  E+E S+ +         N L
Sbjct: 1620 QKEKEPGNSALEEREQEKFNLKEELERCKVQSSTLVSSL-EAELSEVKIQTHIVQQENHL 1678

Query: 215  LKPDEEKKDLSNKAMPSHCDYQQNLGN 241
            LK + EK    ++  P   D+QQ + +
Sbjct: 1679 LKDELEKMKQLHRC-PDLSDFQQKISS 1704


>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
            sapiens]
          Length = 1939

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 155  QKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESE 197
            Q+ KQK   EKSE+  E+      +E + K K  FE  C+  E
Sbjct: 1215 QRVKQKLEKEKSELKMEINDLASNMETVSKAKANFEKMCRTLE 1257


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 3/125 (2%)

Query: 133 KKKRNEGRNEAHVLNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIEELEKE-KDGFEN 191
           +++R + R     L    ++  +KE++K    + E + EL +  ++  E+EKE K   E 
Sbjct: 506 EREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEK 565

Query: 192 SCKESEPSQEQFVPFYEGHNNGLLKPDEEKKDLSNKAMPSHCDYQQNLGNEPDKYPCNGQ 251
             +  +  +++     E      L+ + EK  L  K  P   + +  +  +  +  CN +
Sbjct: 566 ELERQKEKEKELQKMKEQEKECELEKEREK--LEEKIEPREPNLEPMVEKQESENSCNKE 623

Query: 252 VIPTF 256
             P F
Sbjct: 624 EEPVF 628



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 129 KPPEKKKRNEGRNEAHVLNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDG 188
           K  E +K  E + E        +R  +KEK+    ++ E + +  +  ++  ELEKE++ 
Sbjct: 541 KEKELEKEQEKQREME-----KERKQEKEKELERQKEKEKELQKMKEQEKECELEKEREK 595

Query: 189 FENSCKESEPSQEQFVPFYEGHNN 212
            E   +  EP+ E  V   E  N+
Sbjct: 596 LEEKIEPREPNLEPMVEKQESENS 619


>gi|221219020 NYD-SP11 protein [Homo sapiens]
          Length = 2873

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 12/93 (12%)

Query: 131  PEKKKRNEGRNEAHVLNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFE 190
            P  K+R   R EA        + G K K+KF+S+  E+++E   F +E+E L  E +  E
Sbjct: 2191 PFLKRRWRKRKEA--------KRGDKPKEKFSSQVDEVESE-EHFSEEMESLLDELEKQE 2241

Query: 191  NSCKESEPSQEQFVPFYEGHNNGLLKPDEEKKD 223
            +   E E  +E+     E     + + +EE+K+
Sbjct: 2242 SLSSEEEEEREE---EEEREEEEVREEEEERKE 2271



 Score = 29.6 bits (65), Expect = 8.0
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 132  EKKKRNEGRNEAHVLNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFEN 191
            E+++  E R E  V     +R  ++E ++   EK E + +  +  K+ EE++++++ FE 
Sbjct: 2249 EEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEE 2308

Query: 192  SCKESEPSQEQ 202
              KE   S+E+
Sbjct: 2309 --KEEIMSEEE 2317


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 9/97 (9%)

Query: 152  RGGQKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVPFYEGHN 211
            RG + +     SEK  + NEL +  + I ELE     FEN  +E E   ++ V   E  +
Sbjct: 2381 RGLELDVVTIRSEKENLTNELQKEQERISELEIINSSFENILQEKE---QEKVQMKEKSS 2437

Query: 212  NGLLKPDEEKKDLSNKAMPSHCDY------QQNLGNE 242
              +     + K+L+ +    H D       +QNL ++
Sbjct: 2438 TAMEMLQTQLKELNERVAALHNDQEACKAKEQNLSSQ 2474



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 16/103 (15%)

Query: 155 QKEKQKFNSEKSE-----IDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVPFYEG 209
           QK+KQK  +EK+E      +N+      E  E  K+K   E   KES+      V F EG
Sbjct: 49  QKQKQKVENEKTEGTNLKRENQRLMEICESLEKTKQKISHELQVKESQ------VNFQEG 102

Query: 210 H-NNGLLKPDEEKKDLSNKAMPSHCDYQQNLGNEPD--KYPCN 249
             N+G  K   EK +   K   S  +  Q      D    PCN
Sbjct: 103 QLNSG--KKQIEKLEQELKRCKSELERSQQAAQSADVSLNPCN 143


>gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]
          Length = 1498

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 7/146 (4%)

Query: 97  IDSQVLQEARPPLVSADDEIYSTSKAFIGPIYKPPEKKKRNEGRNEAHVLNGINDRGGQK 156
           +  +V+ EA     ++ D++ S  KA      +     +  E R E   ++G   R  + 
Sbjct: 846 LQQKVMVEAYRRDATSKDQLISELKAT-----RKRLDSELKELRQELMQVHG-EKRTAEA 899

Query: 157 EKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGLLK 216
           E  + + E +++   +      ++  +KE+D  E   +  +  +EQ V   E  N  L K
Sbjct: 900 ELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEA-NEALKK 958

Query: 217 PDEEKKDLSNKAMPSHCDYQQNLGNE 242
             EE +  + KA+       + LG++
Sbjct: 959 QIEELQQEARKAITEQKQKMRRLGSD 984


>gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B
           isoform 1 [Homo sapiens]
          Length = 338

 Score = 32.7 bits (73), Expect = 0.95
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 20/106 (18%)

Query: 131 PEKKKRNEGRNEAHVLNGINDRGG--------QKEKQKFNSEKSEIDNELFQFYKEIEEL 182
           PE++++   R E + L     R          Q E  +   EK+E+++E+ +  KE E L
Sbjct: 152 PEEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKEKERL 211

Query: 183 EKEKDGFENSCKESEPSQEQFVPFYEGHNNGLLKPDEEKKDLSNKA 228
           E      +  CK         +P+ EG   G   P  E +DL   A
Sbjct: 212 EFVLVAHKPGCK---------IPYEEGPGPG---PLAEVRDLPGSA 245


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.134    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,938,536
Number of Sequences: 37866
Number of extensions: 1371675
Number of successful extensions: 4311
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 4107
Number of HSP's gapped (non-prelim): 268
length of query: 583
length of database: 18,247,518
effective HSP length: 108
effective length of query: 475
effective length of database: 14,157,990
effective search space: 6725045250
effective search space used: 6725045250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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