Guide to the Human Genome
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Name: N4BP2L1 Sequence: fasta or formatted (173aa) NCBI GI: 119226227
Description:

NEDD4 binding protein 2-like 1 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {243aa} NEDD4 binding protein 2-like 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6          8           1
 C cysteine            0.6          1           1
 D aspartate           4.6          8           2
 E glutamate           6.4         11           2
 F phenylalanine       7.5         13           3
 G glycine             4.0          7           1
 H histidine           3.5          6           1
 I isoleucine          2.9          5           3
 K lysine              5.8         10           2
 L leucine             8.7         15           2
 M methionine          4.0          7           1
 N asparagine          4.6          8           1
 P proline             9.2         16           3
 Q glutamine           7.5         13           5
 R arginine           11.0         19           2
 S serine              4.6          8           1
 T threonine           4.0          7           2
 V valine              2.9          5           2
 W tryptophan          1.7          3           1
 Y tyrosine            1.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NEDD4 binding protein 2-like 1 isoform 2 
N4BP2L1               0.762   NEDD4 binding protein 2-like 1 isoform 1 
N4BP2                 0.279   Nedd4 binding protein 2 
N4BP2L2               0.244   phosphonoformate immuno-associated protein 5 isoform ...
N4BP2L2               0.059   phosphonoformate immuno-associated protein 5 isofor...
CNP                   0.056   2',3'-cyclic nucleotide 3' phosphodiesterase 
YLPM1                 0.047   YLP motif containing 1 
C9orf95               0.035   nicotinamide riboside kinase 1 isoform 2 
C9orf95               0.035   nicotinamide riboside kinase 1 isoform 1 
FOXJ2                 0.035   forkhead box J2 
SOCS7                 0.035   suppressor of cytokine signaling 7 
HTT                   0.029   huntingtin 
GLG1                  0.024   golgi apparatus protein 1 isoform 3 
GLG1                  0.024   golgi apparatus protein 1 isoform 2 
GLG1                  0.024   golgi apparatus protein 1 isoform 1 
RNF31                 0.021   ring finger protein 31 
SFRS15                0.021   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.021   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.021   splicing factor, arginine/serine-rich 15 isoform 1 [...
MEF2A                 0.021   myocyte enhancer factor 2A isoform 4 
MEF2A                 0.021   myocyte enhancer factor 2A isoform 3 
MEF2A                 0.021   myocyte enhancer factor 2A isoform 2 
MEF2A                 0.021   myocyte enhancer factor 2A isoform 1 
CDX2                  0.021   caudal type homeobox 2 
TOB1                  0.021   transducer of ERBB2, 1 
TNS1                  0.018   tensin 
MYST3                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
ZFHX3                 0.018   AT-binding transcription factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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