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Search of human proteins with 75677357
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens]
(1004 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens] 2061 0.0
gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens] 1439 0.0
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 76 2e-13
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 74 9e-13
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 73 2e-12
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 73 2e-12
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 73 2e-12
gi|4557291 autoimmune regulator isoform 1 [Homo sapiens] 68 4e-11
gi|4557293 autoimmune regulator isoform 2 [Homo sapiens] 68 4e-11
gi|209529726 PHD finger protein 21B isoform 2 [Homo sapiens] 61 6e-09
gi|19923937 PHD finger protein 21B isoform 1 [Homo sapiens] 61 6e-09
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 60 8e-09
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 60 8e-09
gi|209977097 tripartite motif-containing 66 [Homo sapiens] 60 1e-08
gi|47419911 transcriptional intermediary factor 1 alpha isoform ... 59 2e-08
gi|47419909 transcriptional intermediary factor 1 alpha isoform ... 59 2e-08
gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] 59 3e-08
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 58 4e-08
gi|38788260 bromodomain PHD finger transcription factor isoform ... 58 4e-08
gi|38788274 bromodomain PHD finger transcription factor isoform ... 58 4e-08
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 58 4e-08
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 58 4e-08
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 58 4e-08
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 58 5e-08
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 58 5e-08
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 55 4e-07
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 55 4e-07
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 55 4e-07
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor... 55 4e-07
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 55 4e-07
>gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens]
Length = 1004
Score = 2061 bits (5340), Expect = 0.0
Identities = 1004/1004 (100%), Positives = 1004/1004 (100%)
Query: 1 MWEKMETKTIVYDLDTSGGLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCD 60
MWEKMETKTIVYDLDTSGGLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCD
Sbjct: 1 MWEKMETKTIVYDLDTSGGLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCD 60
Query: 61 SCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQKKELGHVNG 120
SCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQKKELGHVNG
Sbjct: 61 SCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQKKELGHVNG 120
Query: 121 LVDKSGKRTTSPSSDTDLLDRSASKTELKAIAHARILERRASRPGTPTSSASTETPTSEQ 180
LVDKSGKRTTSPSSDTDLLDRSASKTELKAIAHARILERRASRPGTPTSSASTETPTSEQ
Sbjct: 121 LVDKSGKRTTSPSSDTDLLDRSASKTELKAIAHARILERRASRPGTPTSSASTETPTSEQ 180
Query: 181 NDVDEDIIDVDEEPVAAEPDYVQPQLRRPFELLIAAAMERNPTQFQLPNELTCTTALPGS 240
NDVDEDIIDVDEEPVAAEPDYVQPQLRRPFELLIAAAMERNPTQFQLPNELTCTTALPGS
Sbjct: 181 NDVDEDIIDVDEEPVAAEPDYVQPQLRRPFELLIAAAMERNPTQFQLPNELTCTTALPGS 240
Query: 241 SKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDC 300
SKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDC
Sbjct: 241 SKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDC 300
Query: 301 LEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRFQDTVSQHVVKVDFLNRIHK 360
LEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRFQDTVSQHVVKVDFLNRIHK
Sbjct: 301 LEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRFQDTVSQHVVKVDFLNRIHK 360
Query: 361 KHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRDGELICNGIPEESQMHLLNS 420
KHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRDGELICNGIPEESQMHLLNS
Sbjct: 361 KHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRDGELICNGIPEESQMHLLNS 420
Query: 421 EHLATQAEQQEWLCSVVALQCSILKHLSAKQMPSHWDSEQTEKADIKPVIVTDSSVTTSL 480
EHLATQAEQQEWLCSVVALQCSILKHLSAKQMPSHWDSEQTEKADIKPVIVTDSSVTTSL
Sbjct: 421 EHLATQAEQQEWLCSVVALQCSILKHLSAKQMPSHWDSEQTEKADIKPVIVTDSSVTTSL 480
Query: 481 QTADKTPTPSHYPLSCPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKKTPCGTANGP 540
QTADKTPTPSHYPLSCPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKKTPCGTANGP
Sbjct: 481 QTADKTPTPSHYPLSCPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKKTPCGTANGP 540
Query: 541 VNTEVKANGPHLYSSPTDSTDPRRLPGANTPLPGLSHRQGWPRPLTPPAAGGLQNHTVGI 600
VNTEVKANGPHLYSSPTDSTDPRRLPGANTPLPGLSHRQGWPRPLTPPAAGGLQNHTVGI
Sbjct: 541 VNTEVKANGPHLYSSPTDSTDPRRLPGANTPLPGLSHRQGWPRPLTPPAAGGLQNHTVGI 600
Query: 601 IVKTENATGPSSCPQRSLVPVPSLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPL 660
IVKTENATGPSSCPQRSLVPVPSLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPL
Sbjct: 601 IVKTENATGPSSCPQRSLVPVPSLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPL 660
Query: 661 GSPPNATRVLTPPQAAGDGILATTANQRFSSPAPSSDGKVSPGTLSIGSALTVPSFPANS 720
GSPPNATRVLTPPQAAGDGILATTANQRFSSPAPSSDGKVSPGTLSIGSALTVPSFPANS
Sbjct: 661 GSPPNATRVLTPPQAAGDGILATTANQRFSSPAPSSDGKVSPGTLSIGSALTVPSFPANS 720
Query: 721 TAMVDLTNSLRAFMDVNGEIEINMLDEKLIKFLALQRIHQLFPSRVQPSPGSVGTHQLAS 780
TAMVDLTNSLRAFMDVNGEIEINMLDEKLIKFLALQRIHQLFPSRVQPSPGSVGTHQLAS
Sbjct: 721 TAMVDLTNSLRAFMDVNGEIEINMLDEKLIKFLALQRIHQLFPSRVQPSPGSVGTHQLAS 780
Query: 781 GGHHIEVQRKEVQARAVFYPLLGLGGAVNMCYRTLYIGTGADMDVCLTNYGHCNYVSGKH 840
GGHHIEVQRKEVQARAVFYPLLGLGGAVNMCYRTLYIGTGADMDVCLTNYGHCNYVSGKH
Sbjct: 781 GGHHIEVQRKEVQARAVFYPLLGLGGAVNMCYRTLYIGTGADMDVCLTNYGHCNYVSGKH 840
Query: 841 ACIFYDENTKHYELLNYSEHGTTVDNVLYSCDFSEKTPPTPPSSIVAKVQSVIRRRRHQK 900
ACIFYDENTKHYELLNYSEHGTTVDNVLYSCDFSEKTPPTPPSSIVAKVQSVIRRRRHQK
Sbjct: 841 ACIFYDENTKHYELLNYSEHGTTVDNVLYSCDFSEKTPPTPPSSIVAKVQSVIRRRRHQK 900
Query: 901 QDEEPSEEAAMMSSQAQGPQRRPCNCKASSSSLIGGSGAGWEGTALLHHGSYIKLGCLQF 960
QDEEPSEEAAMMSSQAQGPQRRPCNCKASSSSLIGGSGAGWEGTALLHHGSYIKLGCLQF
Sbjct: 901 QDEEPSEEAAMMSSQAQGPQRRPCNCKASSSSLIGGSGAGWEGTALLHHGSYIKLGCLQF 960
Query: 961 VFSITEFATKQPKGDASLLQDGVLAEKLSLKPHQGPVLRSNSVP 1004
VFSITEFATKQPKGDASLLQDGVLAEKLSLKPHQGPVLRSNSVP
Sbjct: 961 VFSITEFATKQPKGDASLLQDGVLAEKLSLKPHQGPVLRSNSVP 1004
>gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens]
Length = 704
Score = 1439 bits (3724), Expect = 0.0
Identities = 696/696 (100%), Positives = 696/696 (100%)
Query: 1 MWEKMETKTIVYDLDTSGGLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCD 60
MWEKMETKTIVYDLDTSGGLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCD
Sbjct: 1 MWEKMETKTIVYDLDTSGGLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCD 60
Query: 61 SCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQKKELGHVNG 120
SCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQKKELGHVNG
Sbjct: 61 SCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQKKELGHVNG 120
Query: 121 LVDKSGKRTTSPSSDTDLLDRSASKTELKAIAHARILERRASRPGTPTSSASTETPTSEQ 180
LVDKSGKRTTSPSSDTDLLDRSASKTELKAIAHARILERRASRPGTPTSSASTETPTSEQ
Sbjct: 121 LVDKSGKRTTSPSSDTDLLDRSASKTELKAIAHARILERRASRPGTPTSSASTETPTSEQ 180
Query: 181 NDVDEDIIDVDEEPVAAEPDYVQPQLRRPFELLIAAAMERNPTQFQLPNELTCTTALPGS 240
NDVDEDIIDVDEEPVAAEPDYVQPQLRRPFELLIAAAMERNPTQFQLPNELTCTTALPGS
Sbjct: 181 NDVDEDIIDVDEEPVAAEPDYVQPQLRRPFELLIAAAMERNPTQFQLPNELTCTTALPGS 240
Query: 241 SKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDC 300
SKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDC
Sbjct: 241 SKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDC 300
Query: 301 LEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRFQDTVSQHVVKVDFLNRIHK 360
LEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRFQDTVSQHVVKVDFLNRIHK
Sbjct: 301 LEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRFQDTVSQHVVKVDFLNRIHK 360
Query: 361 KHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRDGELICNGIPEESQMHLLNS 420
KHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRDGELICNGIPEESQMHLLNS
Sbjct: 361 KHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRDGELICNGIPEESQMHLLNS 420
Query: 421 EHLATQAEQQEWLCSVVALQCSILKHLSAKQMPSHWDSEQTEKADIKPVIVTDSSVTTSL 480
EHLATQAEQQEWLCSVVALQCSILKHLSAKQMPSHWDSEQTEKADIKPVIVTDSSVTTSL
Sbjct: 421 EHLATQAEQQEWLCSVVALQCSILKHLSAKQMPSHWDSEQTEKADIKPVIVTDSSVTTSL 480
Query: 481 QTADKTPTPSHYPLSCPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKKTPCGTANGP 540
QTADKTPTPSHYPLSCPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKKTPCGTANGP
Sbjct: 481 QTADKTPTPSHYPLSCPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKKTPCGTANGP 540
Query: 541 VNTEVKANGPHLYSSPTDSTDPRRLPGANTPLPGLSHRQGWPRPLTPPAAGGLQNHTVGI 600
VNTEVKANGPHLYSSPTDSTDPRRLPGANTPLPGLSHRQGWPRPLTPPAAGGLQNHTVGI
Sbjct: 541 VNTEVKANGPHLYSSPTDSTDPRRLPGANTPLPGLSHRQGWPRPLTPPAAGGLQNHTVGI 600
Query: 601 IVKTENATGPSSCPQRSLVPVPSLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPL 660
IVKTENATGPSSCPQRSLVPVPSLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPL
Sbjct: 601 IVKTENATGPSSCPQRSLVPVPSLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPL 660
Query: 661 GSPPNATRVLTPPQAAGDGILATTANQRFSSPAPSS 696
GSPPNATRVLTPPQAAGDGILATTANQRFSSPAPSS
Sbjct: 661 GSPPNATRVLTPPQAAGDGILATTANQRFSSPAPSS 696
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 75.9 bits (185), Expect = 2e-13
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 31 PKTDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEE 90
PK D+ E+ E+E + + C CK+GG+LLCCD CP+++HL C NPPL E
Sbjct: 396 PKDDDDEEEEGGCEEE-----EDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPE- 449
Query: 91 MLPPGEWMCHRCT 103
+P GEW+C RCT
Sbjct: 450 -IPNGEWLCPRCT 461
Score = 63.5 bits (153), Expect = 9e-10
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 38 KRSRKPEKEPRRSGRATNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGE 96
KR RK ++ G T+H D C+ C++GG+++ CD CP A+HL C +P L E P G+
Sbjct: 324 KRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEL--EKAPEGK 381
Query: 97 WMCHRC 102
W C C
Sbjct: 382 WSCPHC 387
Score = 53.1 bits (126), Expect = 1e-06
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 233 CTTALPGSSKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYC 292
C+ AL SKRRRK++ +E DH C C + +I CD C
Sbjct: 315 CSAALGKKSKRRRKKKRIDDG---DGYETDHQDY-------CEVCQQG---GEIILCDTC 361
Query: 293 PLLFHMDCLEPPLTAMPLGRWMCPN 317
P +H+ CL+P L P G+W CP+
Sbjct: 362 PRAYHLVCLDPELEKAPEGKWSCPH 386
Score = 47.4 bits (111), Expect = 7e-05
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 281 CRVAP----LIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
CRV L+ CD CP +H+ CL PPL +P G W+CP
Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCP 458
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 73.6 bits (179), Expect = 9e-13
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 59 CDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQKKEL 115
C CK+GG+LLCCD CP+++H+ C NPPL E +P GEW+C RCT K + +K L
Sbjct: 452 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPE--IPNGEWLCPRCTCPALKGKVQKIL 506
Score = 61.2 bits (147), Expect = 5e-09
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 38 KRSRKPEKEPRR-SGRATNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPG 95
K+ +K E+E G T+H D C+ C++GG+++ CD CP A+H+ C +P + E P G
Sbjct: 350 KKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDM--EKAPEG 407
Query: 96 EWMCHRCTVRRKKREQKKELGHVNGLVDKSG 126
+W C C + E K++ ++++ G
Sbjct: 408 KWSCPHCEKEGIQWEAKEDNSEGEEILEEVG 438
Score = 51.2 bits (121), Expect = 5e-06
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 240 SSKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMD 299
SS+ R+K TT K K + +G C C + +I CD CP +HM
Sbjct: 339 SSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQG---GEIILCDTCPRAYHMV 395
Query: 300 CLEPPLTAMPLGRWMCPN 317
CL+P + P G+W CP+
Sbjct: 396 CLDPDMEKAPEGKWSCPH 413
Score = 47.0 bits (110), Expect = 9e-05
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 281 CRVAP----LIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
CRV L+ CD CP +H+ CL PPL +P G W+CP
Sbjct: 452 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCP 491
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 72.8 bits (177), Expect = 2e-12
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 34 DEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLP 93
+E E+ + E+E + + + C CK+GG+LLCCD C +++H+ C NPPL + +P
Sbjct: 434 EEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPD--IP 491
Query: 94 PGEWMCHRCT 103
GEW+C RCT
Sbjct: 492 NGEWLCPRCT 501
Score = 60.1 bits (144), Expect = 1e-08
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 46 EPRRSGRATNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTV 104
E G T+H D C+ C++GG+++ CD CP A+HL C +P L + P G+W C C
Sbjct: 368 EEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEL--DRAPEGKWSCPHCEK 425
Query: 105 RRKKREQKKE 114
+ E K+E
Sbjct: 426 EGVQWEAKEE 435
Score = 44.7 bits (104), Expect = 4e-04
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 244 RRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDCLEP 303
R+K++ G + E+D G C C + +I CD CP +H+ CL+P
Sbjct: 354 RKKKKVLGCPAVAGEEEVD--GYETDHQDYCEVCQQG---GEIILCDTCPRAYHLVCLDP 408
Query: 304 PLTAMPLGRWMCPN 317
L P G+W CP+
Sbjct: 409 ELDRAPEGKWSCPH 422
Score = 43.9 bits (102), Expect = 8e-04
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 240 SSKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMD 299
+ + + E G+ + + E DH ++ C C L+ CD C +H+
Sbjct: 432 AKEEEEEYEEEGEEEGEKEEEDDH-------MEYCRVCKDG---GELLCCDACISSYHIH 481
Query: 300 CLEPPLTAMPLGRWMCP 316
CL PPL +P G W+CP
Sbjct: 482 CLNPPLPDIPNGEWLCP 498
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 72.8 bits (177), Expect = 2e-12
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 34 DEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLP 93
+E E+ + E+E + + + C CK+GG+LLCCD C +++H+ C NPPL + +P
Sbjct: 434 EEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPD--IP 491
Query: 94 PGEWMCHRCT 103
GEW+C RCT
Sbjct: 492 NGEWLCPRCT 501
Score = 60.1 bits (144), Expect = 1e-08
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 46 EPRRSGRATNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTV 104
E G T+H D C+ C++GG+++ CD CP A+HL C +P L + P G+W C C
Sbjct: 368 EEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEL--DRAPEGKWSCPHCEK 425
Query: 105 RRKKREQKKE 114
+ E K+E
Sbjct: 426 EGVQWEAKEE 435
Score = 44.7 bits (104), Expect = 4e-04
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 244 RRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDCLEP 303
R+K++ G + E+D G C C + +I CD CP +H+ CL+P
Sbjct: 354 RKKKKVLGCPAVAGEEEVD--GYETDHQDYCEVCQQG---GEIILCDTCPRAYHLVCLDP 408
Query: 304 PLTAMPLGRWMCPN 317
L P G+W CP+
Sbjct: 409 ELDRAPEGKWSCPH 422
Score = 43.9 bits (102), Expect = 8e-04
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 240 SSKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMD 299
+ + + E G+ + + E DH ++ C C L+ CD C +H+
Sbjct: 432 AKEEEEEYEEEGEEEGEKEEEDDH-------MEYCRVCKDG---GELLCCDACISSYHIH 481
Query: 300 CLEPPLTAMPLGRWMCP 316
CL PPL +P G W+CP
Sbjct: 482 CLNPPLPDIPNGEWLCP 498
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 72.8 bits (177), Expect = 2e-12
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 34 DEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLP 93
+E E+ + E+E + + + C CK+GG+LLCCD C +++H+ C NPPL + +P
Sbjct: 493 EEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPD--IP 550
Query: 94 PGEWMCHRCT 103
GEW+C RCT
Sbjct: 551 NGEWLCPRCT 560
Score = 60.1 bits (144), Expect = 1e-08
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 46 EPRRSGRATNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTV 104
E G T+H D C+ C++GG+++ CD CP A+HL C +P L + P G+W C C
Sbjct: 427 EEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEL--DRAPEGKWSCPHCEK 484
Query: 105 RRKKREQKKE 114
+ E K+E
Sbjct: 485 EGVQWEAKEE 494
Score = 44.7 bits (104), Expect = 4e-04
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 244 RRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDCLEP 303
R+K++ G + E+D G C C + +I CD CP +H+ CL+P
Sbjct: 413 RKKKKVLGCPAVAGEEEVD--GYETDHQDYCEVCQQG---GEIILCDTCPRAYHLVCLDP 467
Query: 304 PLTAMPLGRWMCPN 317
L P G+W CP+
Sbjct: 468 ELDRAPEGKWSCPH 481
Score = 43.9 bits (102), Expect = 8e-04
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 240 SSKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMD 299
+ + + E G+ + + E DH ++ C C L+ CD C +H+
Sbjct: 491 AKEEEEEYEEEGEEEGEKEEEDDH-------MEYCRVCKDG---GELLCCDACISSYHIH 540
Query: 300 CLEPPLTAMPLGRWMCP 316
CL PPL +P G W+CP
Sbjct: 541 CLNPPLPDIPNGEWLCP 557
>gi|4557291 autoimmune regulator isoform 1 [Homo sapiens]
Length = 545
Score = 68.2 bits (165), Expect = 4e-11
Identities = 26/48 (54%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
N D C C++GG+L+CCD CP AFHL C +PPL E +P G W C C
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLRE--IPSGTWRCSSC 340
Score = 45.4 bits (106), Expect = 3e-04
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 286 LIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHVV 323
LI CD CP FH+ CL PPL +P G W C + ++ V
Sbjct: 308 LICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 345
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 59 CDSCKEGGDLLCCDHCPAAFHLQCCNP 85
C C +G D+L C HC AAFH +C P
Sbjct: 434 CGVCGDGTDVLRCTHCAAAFHWRCHFP 460
>gi|4557293 autoimmune regulator isoform 2 [Homo sapiens]
Length = 348
Score = 68.2 bits (165), Expect = 4e-11
Identities = 26/48 (54%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
N D C C++GG+L+CCD CP AFHL C +PPL E +P G W C C
Sbjct: 98 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLRE--IPSGTWRCSSC 143
Score = 45.4 bits (106), Expect = 3e-04
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 286 LIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHVV 323
LI CD CP FH+ CL PPL +P G W C + ++ V
Sbjct: 111 LICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 148
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 59 CDSCKEGGDLLCCDHCPAAFHLQCCNP 85
C C +G D+L C HC AAFH +C P
Sbjct: 237 CGVCGDGTDVLRCTHCAAAFHWRCHFP 263
>gi|209529726 PHD finger protein 21B isoform 2 [Homo sapiens]
Length = 489
Score = 60.8 bits (146), Expect = 6e-09
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAF 78
GL+E + LA + + + ++P T+ + C +CK G +L C CP A+
Sbjct: 273 GLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAY 332
Query: 79 HLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQ 111
HL C PPL + P G W+C RC + K+++
Sbjct: 333 HLSCLEPPL--KTAPKGVWVCPRCQQKALKKDE 363
Score = 50.8 bits (120), Expect = 6e-06
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSN 333
C C R + P C CP +H+ CLEPPL P G W+CP + + + + +
Sbjct: 313 CAACKRGANLQP---CGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTG 369
Query: 334 RCQVFDRFQDTVSQHVVKVDFLNRIHKKHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPL 393
+ + V+ VK + ++ ++ + Q ++ R ++ A++ + L
Sbjct: 370 MLAIVHSY---VTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSL 426
Query: 394 IA 395
+A
Sbjct: 427 LA 428
>gi|19923937 PHD finger protein 21B isoform 1 [Homo sapiens]
Length = 531
Score = 60.8 bits (146), Expect = 6e-09
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAF 78
GL+E + LA + + + ++P T+ + C +CK G +L C CP A+
Sbjct: 315 GLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAY 374
Query: 79 HLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQ 111
HL C PPL + P G W+C RC + K+++
Sbjct: 375 HLSCLEPPL--KTAPKGVWVCPRCQQKALKKDE 405
Score = 50.8 bits (120), Expect = 6e-06
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSN 333
C C R + P C CP +H+ CLEPPL P G W+CP + + + + +
Sbjct: 355 CAACKRGANLQP---CGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTG 411
Query: 334 RCQVFDRFQDTVSQHVVKVDFLNRIHKKHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPL 393
+ + V+ VK + ++ ++ + Q ++ R ++ A++ + L
Sbjct: 412 MLAIVHSY---VTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSL 468
Query: 394 IA 395
+A
Sbjct: 469 LA 470
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 60.5 bits (145), Expect = 8e-09
Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 47 PRRSGRATNHDS---CDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
PRR R H + C C EGG LLCCD CPAAFH +C N +P G W C+ C
Sbjct: 1426 PRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-----IPEGNWYCNDCK 1480
Query: 104 VRRK 107
+K
Sbjct: 1481 AGKK 1484
Score = 46.2 bits (108), Expect = 2e-04
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 30 PPKTDEAEKRSRKPEKEPRRS-GRAT--NHDSCDSCKEGGDLLCCDH--CPAAFHLQCCN 84
P T+E K+ +K ++ RR+ G T D C SC + G L+ C CP +H C N
Sbjct: 1820 PIATEEKSKKFKKKQQGKRRTQGEITKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLN 1879
Query: 85 PPLSEEMLPPGEWMC--HRCTVRRKK 108
L++ P G+W C H+C + K+
Sbjct: 1880 --LTKR--PAGKWECPWHQCDICGKE 1901
Score = 43.5 bits (101), Expect = 0.001
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 34 DEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCD-HCPAAFHLQCCNPPLSEEML 92
D S+K + E R G A + C +C++ G+LL C+ C AFHL+C L +
Sbjct: 1253 DPGMPASKKMQGE-RGGGAALKENVCQNCEKLGELLLCEAQCCGAFHLEC----LGLTEM 1307
Query: 93 PPGEWMCHRC 102
P G+++C+ C
Sbjct: 1308 PRGKFICNEC 1317
Score = 41.2 bits (95), Expect = 0.005
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 20/79 (25%)
Query: 242 KRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDY--CPLLFHMD 299
K++ K T G+ K+ + E CF+C + L+ C CP ++H D
Sbjct: 1833 KQQGKRRTQGEITKEREDE-------------CFSCGDA---GQLVSCKKPGCPKVYHAD 1876
Query: 300 CLEPPLTAMPLGRWMCPNH 318
CL LT P G+W CP H
Sbjct: 1877 CLN--LTKRPAGKWECPWH 1893
Score = 36.2 bits (82), Expect = 0.16
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 271 VKVCFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
V CF C+ L+ CD CP FH +CL +P G W C
Sbjct: 1438 VSWCFVCSEG---GSLLCCDSCPAAFHRECLN---IDIPEGNWYC 1476
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 60.5 bits (145), Expect = 8e-09
Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 47 PRRSGRATNHDS---CDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
PRR R H + C C EGG LLCCD CPAAFH +C N +P G W C+ C
Sbjct: 1695 PRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-----IPEGNWYCNDCK 1749
Query: 104 VRRK 107
+K
Sbjct: 1750 AGKK 1753
Score = 46.2 bits (108), Expect = 2e-04
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 30 PPKTDEAEKRSRKPEKEPRRS-GRAT--NHDSCDSCKEGGDLLCCDH--CPAAFHLQCCN 84
P T+E K+ +K ++ RR+ G T D C SC + G L+ C CP +H C N
Sbjct: 2089 PIATEEKSKKFKKKQQGKRRTQGEITKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLN 2148
Query: 85 PPLSEEMLPPGEWMC--HRCTVRRKK 108
L++ P G+W C H+C + K+
Sbjct: 2149 --LTKR--PAGKWECPWHQCDICGKE 2170
Score = 43.5 bits (101), Expect = 0.001
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 34 DEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCD-HCPAAFHLQCCNPPLSEEML 92
D S+K + E R G A + C +C++ G+LL C+ C AFHL+C L +
Sbjct: 1522 DPGMPASKKMQGE-RGGGAALKENVCQNCEKLGELLLCEAQCCGAFHLEC----LGLTEM 1576
Query: 93 PPGEWMCHRC 102
P G+++C+ C
Sbjct: 1577 PRGKFICNEC 1586
Score = 41.2 bits (95), Expect = 0.005
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 20/79 (25%)
Query: 242 KRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDY--CPLLFHMD 299
K++ K T G+ K+ + E CF+C + L+ C CP ++H D
Sbjct: 2102 KQQGKRRTQGEITKEREDE-------------CFSCGDA---GQLVSCKKPGCPKVYHAD 2145
Query: 300 CLEPPLTAMPLGRWMCPNH 318
CL LT P G+W CP H
Sbjct: 2146 CLN--LTKRPAGKWECPWH 2162
Score = 36.2 bits (82), Expect = 0.16
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 271 VKVCFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
V CF C+ L+ CD CP FH +CL +P G W C
Sbjct: 1707 VSWCFVCSEG---GSLLCCDSCPAAFHRECLN---IDIPEGNWYC 1745
>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
Length = 1216
Score = 60.1 bits (144), Expect = 1e-08
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQKKE 114
N D C C GG+LLCCD CP FHL C P L P GEW+C C R + + E
Sbjct: 969 NEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLS--FPGGEWVCTLC---RSLTQPEME 1023
Query: 115 LGHVNGLVDKSGKRTT 130
N ++ G R +
Sbjct: 1024 YDCENACYNQPGMRAS 1039
Score = 40.8 bits (94), Expect = 0.006
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 268 PLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
P P++ C L+ CD CP +FH+ C P L + P G W+C
Sbjct: 964 PAPIENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVC 1011
>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
[Homo sapiens]
Length = 1050
Score = 58.9 bits (141), Expect = 2e-08
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
N D C C+ GG+LLCC+ CP FHL C P L+ P GEW+C C
Sbjct: 825 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTN--FPSGEWICTFC 870
Score = 42.0 bits (97), Expect = 0.003
Identities = 48/194 (24%), Positives = 69/194 (35%), Gaps = 37/194 (19%)
Query: 153 HARILERRASRPGTPTSSASTETPTSEQNDVDEDIIDVDEEPVAAEPDYVQPQLRRPFEL 212
H I AS G+ SS S+ P + ++ + EP+ + + P F +
Sbjct: 680 HPPIRSPSASSVGSRGSSGSSSKPAGADSTHKVPVVML--EPIRIKQENSGPPENYDFPV 737
Query: 213 LIA---AAMERNPTQFQLPNELTCTTALPGSSKRRRKEET---------TGKNVKKTQHE 260
+I + E P P + T+ L SS+ EET TG Q
Sbjct: 738 VIVKQESDEESRPQNANYPRSIL-TSLLLNSSQSSTSEETVLRSDAPDSTGDQPGLHQDN 796
Query: 261 --------LDHNGLVPLPVKV-----------CFTCNRSCRVAPLIQCDYCPLLFHMDCL 301
LD + PL V C C L+ C+ CP +FH+ C
Sbjct: 797 SSNGKSEWLDPSQKSPLHVGETRKEDDPNEDWCAVCQNG---GELLCCEKCPKVFHLSCH 853
Query: 302 EPPLTAMPLGRWMC 315
P LT P G W+C
Sbjct: 854 VPTLTNFPSGEWIC 867
>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
[Homo sapiens]
Length = 1016
Score = 58.9 bits (141), Expect = 2e-08
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
N D C C+ GG+LLCC+ CP FHL C P L+ P GEW+C C
Sbjct: 791 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTN--FPSGEWICTFC 836
Score = 42.0 bits (97), Expect = 0.003
Identities = 48/194 (24%), Positives = 69/194 (35%), Gaps = 37/194 (19%)
Query: 153 HARILERRASRPGTPTSSASTETPTSEQNDVDEDIIDVDEEPVAAEPDYVQPQLRRPFEL 212
H I AS G+ SS S+ P + ++ + EP+ + + P F +
Sbjct: 646 HPPIRSPSASSVGSRGSSGSSSKPAGADSTHKVPVVML--EPIRIKQENSGPPENYDFPV 703
Query: 213 LIA---AAMERNPTQFQLPNELTCTTALPGSSKRRRKEET---------TGKNVKKTQHE 260
+I + E P P + T+ L SS+ EET TG Q
Sbjct: 704 VIVKQESDEESRPQNANYPRSIL-TSLLLNSSQSSTSEETVLRSDAPDSTGDQPGLHQDN 762
Query: 261 --------LDHNGLVPLPVKV-----------CFTCNRSCRVAPLIQCDYCPLLFHMDCL 301
LD + PL V C C L+ C+ CP +FH+ C
Sbjct: 763 SSNGKSEWLDPSQKSPLHVGETRKEDDPNEDWCAVCQNG---GELLCCEKCPKVFHLSCH 819
Query: 302 EPPLTAMPLGRWMC 315
P LT P G W+C
Sbjct: 820 VPTLTNFPSGEWIC 833
>gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]
Length = 634
Score = 58.5 bits (140), Expect = 3e-08
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 40 SRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 99
+RK E + D C C++ G LL CD C +HL C +PPL + +P G W+C
Sbjct: 426 TRKRANEEHWPKGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPL--KTIPKGMWIC 483
Query: 100 HRCTVRRKKREQ 111
RC + K+E+
Sbjct: 484 PRCQDQMLKKEE 495
Score = 52.4 bits (124), Expect = 2e-06
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 18/83 (21%)
Query: 234 TTALPGSSKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCP 293
+T PG+ KR +E ++ HE C C +S L+ CD C
Sbjct: 420 STMHPGTRKRANEEHWPKGDI----HE-----------DFCSVCRKS---GQLLMCDTCS 461
Query: 294 LLFHMDCLEPPLTAMPLGRWMCP 316
++H+DCL+PPL +P G W+CP
Sbjct: 462 RVYHLDCLDPPLKTIPKGMWICP 484
>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
Length = 680
Score = 58.2 bits (139), Expect = 4e-08
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQ 111
+ D C C++ G LL CD C +HL C +PPL + +P G W+C RC + K+E+
Sbjct: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPL--KTIPKGMWICPRCQDQMLKKEE 541
Score = 52.0 bits (123), Expect = 3e-06
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
C C +S L+ CD C ++H+DCL+PPL +P G W+CP
Sbjct: 491 CSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICP 530
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 58.2 bits (139), Expect = 4e-08
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
D C C + GDLLCC+ C A +HL+C PPL E +P EW C C +
Sbjct: 391 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEE--VPEDEWQCEVCVAHK 438
Score = 41.2 bits (95), Expect = 0.005
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 277 CNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHVV 323
C ++ L+ C+ C ++H++C++PPL +P W C + H V
Sbjct: 393 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKV 439
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 58.2 bits (139), Expect = 4e-08
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
D C C + GDLLCC+ C A +HL+C PPL E +P EW C C +
Sbjct: 391 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEE--VPEDEWQCEVCVAHK 438
Score = 41.2 bits (95), Expect = 0.005
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 277 CNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHVV 323
C ++ L+ C+ C ++H++C++PPL +P W C + H V
Sbjct: 393 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKV 439
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 58.2 bits (139), Expect = 4e-08
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 58 SCDSCKEGG----DLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKRE--Q 111
+C SC++ G ++L CD C FH++CC+PPL+ +P G W+C C R+K R+ Q
Sbjct: 264 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTR--MPKGMWICQICRPRKKGRKLLQ 321
Query: 112 KK 113
KK
Sbjct: 322 KK 323
Score = 47.8 bits (112), Expect = 5e-05
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 274 CFTCNRSCR-----VAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
C TC+ SCR ++ CD C FHM+C +PPLT MP G W+C
Sbjct: 262 CKTCS-SCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWIC 307
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 58.2 bits (139), Expect = 4e-08
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 58 SCDSCKEGG----DLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKRE--Q 111
+C SC++ G ++L CD C FH++CC+PPL+ +P G W+C C R+K R+ Q
Sbjct: 264 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTR--MPKGMWICQICRPRKKGRKLLQ 321
Query: 112 KK 113
KK
Sbjct: 322 KK 323
Score = 47.8 bits (112), Expect = 5e-05
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 274 CFTCNRSCR-----VAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
C TC+ SCR ++ CD C FHM+C +PPLT MP G W+C
Sbjct: 262 CKTCS-SCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWIC 307
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 58.2 bits (139), Expect = 4e-08
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 58 SCDSCKEGG----DLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKRE--Q 111
+C SC++ G ++L CD C FH++CC+PPL+ +P G W+C C R+K R+ Q
Sbjct: 264 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTR--MPKGMWICQICRPRKKGRKLLQ 321
Query: 112 KK 113
KK
Sbjct: 322 KK 323
Score = 47.8 bits (112), Expect = 5e-05
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 274 CFTCNRSCR-----VAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
C TC+ SCR ++ CD C FHM+C +PPLT MP G W+C
Sbjct: 262 CKTCS-SCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWIC 307
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 57.8 bits (138), Expect = 5e-08
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
N D C C+ GGDLLCC+ CP FHL C P L P G+W+C C
Sbjct: 886 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLS--FPSGDWICTFC 931
Score = 38.1 bits (87), Expect = 0.042
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
C C L+ C+ CP +FH+ C P L + P G W+C
Sbjct: 890 CAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWIC 928
Score = 31.2 bits (69), Expect = 5.1
Identities = 45/204 (22%), Positives = 76/204 (37%), Gaps = 25/204 (12%)
Query: 388 QFPPPLIAPAAIRDGELICNGIPEESQMHLLNSEHLATQAEQQEWLCSVVALQCSILKHL 447
Q PP LI+ ++ G + C Q H + LA A + + Q S+++
Sbjct: 564 QQPPRLISVQTMQRGNMNCGAF----QAHQMR---LAQNAARIPGIPRHSGPQYSMMQPH 616
Query: 448 SAKQMPSHWDSEQTEKADIKPVIVTDSSVTTS-LQTADKTPT-PSHYPLSCPSGISTQNS 505
+Q + + + + +S TT+ + A++ PT PS + ++ +
Sbjct: 617 LQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMANANRGPTSPSVTAIELIPSVTNPEN 676
Query: 506 LSCSPPHQSPALEDIGCSSCAEKSKKTPCGTANGPVNTEVKANGPHLYSSPTDSTDPRRL 565
L P LED G SS + +G HL PT + +P
Sbjct: 677 LPSLPDIPPIQLEDAGSSSLDNLLSRY--------------ISGSHLPPQPTSTMNPS-- 720
Query: 566 PGANTPLPGLSHRQGWPRPLTPPA 589
PG + PG S P+ PP+
Sbjct: 721 PGPSALSPGSSGLSNSHTPVRPPS 744
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 57.8 bits (138), Expect = 5e-08
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
N D C C+ GGDLLCC+ CP FHL C P L P G+W+C C
Sbjct: 886 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLS--FPSGDWICTFC 931
Score = 38.1 bits (87), Expect = 0.042
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
C C L+ C+ CP +FH+ C P L + P G W+C
Sbjct: 890 CAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWIC 928
Score = 31.2 bits (69), Expect = 5.1
Identities = 45/204 (22%), Positives = 76/204 (37%), Gaps = 25/204 (12%)
Query: 388 QFPPPLIAPAAIRDGELICNGIPEESQMHLLNSEHLATQAEQQEWLCSVVALQCSILKHL 447
Q PP LI+ ++ G + C Q H + LA A + + Q S+++
Sbjct: 564 QQPPRLISVQTMQRGNMNCGAF----QAHQMR---LAQNAARIPGIPRHSGPQYSMMQPH 616
Query: 448 SAKQMPSHWDSEQTEKADIKPVIVTDSSVTTS-LQTADKTPT-PSHYPLSCPSGISTQNS 505
+Q + + + + +S TT+ + A++ PT PS + ++ +
Sbjct: 617 LQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMANANRGPTSPSVTAIELIPSVTNPEN 676
Query: 506 LSCSPPHQSPALEDIGCSSCAEKSKKTPCGTANGPVNTEVKANGPHLYSSPTDSTDPRRL 565
L P LED G SS + +G HL PT + +P
Sbjct: 677 LPSLPDIPPIQLEDAGSSSLDNLLSRY--------------ISGSHLPPQPTSTMNPS-- 720
Query: 566 PGANTPLPGLSHRQGWPRPLTPPA 589
PG + PG S P+ PP+
Sbjct: 721 PGPSALSPGSSGLSNSHTPVRPPS 744
>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 54.7 bits (130), Expect = 4e-07
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 45 KEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTV 104
++ +R N C C +GG LLCC+ CPAAFH C N +P G W C+ C
Sbjct: 820 RKGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNIE-----MPDGSWFCNDCRA 874
Query: 105 RRK 107
+K
Sbjct: 875 GKK 877
Score = 48.5 bits (114), Expect = 3e-05
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 31 PKTD---EAEKRSRKPEKEPRR-----SGRATNHDSCDSCKEGGDLLCCDH--CPAAFHL 80
PKT +E++ +K +K+ RR G+ + D C C +GG L+ CD C A+HL
Sbjct: 1206 PKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHL 1265
Query: 81 QCCNPPLSEEMLPPGEWMC--HRCTV 104
C L P G+W C H C V
Sbjct: 1266 SC----LGLGKRPFGKWECPWHHCDV 1287
Score = 38.1 bits (87), Expect = 0.042
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 271 VKVCFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
V CF C++ L+ C+ CP FH DCL MP G W C
Sbjct: 831 VSWCFVCSKG---GSLLCCESCPAAFHPDCLN---IEMPDGSWFC 869
Score = 37.0 bits (84), Expect = 0.093
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 34 DEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDH-CPAAFHLQCCNPPLSEEML 92
DE + K+ R A C C++ G LL C+ C AFHL C L
Sbjct: 645 DETQTEVSVSSKKSERGVTAKKEYVCQLCEKPGSLLLCEGPCCGAFHLAC----LGLSRR 700
Query: 93 PPGEWMCHRC 102
P G + C C
Sbjct: 701 PEGRFTCSEC 710
Score = 36.2 bits (82), Expect = 0.16
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 238 PGSSKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCD--YCPLL 295
P +S EE K KKT+ CF C L+ CD +C
Sbjct: 1206 PKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSEDECFRCGDG---GQLVLCDRKFCTKA 1262
Query: 296 FHMDCLEPPLTAMPLGRWMCPNH 318
+H+ CL L P G+W CP H
Sbjct: 1263 YHLSCLG--LGKRPFGKWECPWH 1283
>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 54.7 bits (130), Expect = 4e-07
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 45 KEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTV 104
++ +R N C C +GG LLCC+ CPAAFH C N +P G W C+ C
Sbjct: 820 RKGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNIE-----MPDGSWFCNDCRA 874
Query: 105 RRK 107
+K
Sbjct: 875 GKK 877
Score = 48.5 bits (114), Expect = 3e-05
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 31 PKTD---EAEKRSRKPEKEPRR-----SGRATNHDSCDSCKEGGDLLCCDH--CPAAFHL 80
PKT +E++ +K +K+ RR G+ + D C C +GG L+ CD C A+HL
Sbjct: 1206 PKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHL 1265
Query: 81 QCCNPPLSEEMLPPGEWMC--HRCTV 104
C L P G+W C H C V
Sbjct: 1266 SC----LGLGKRPFGKWECPWHHCDV 1287
Score = 38.1 bits (87), Expect = 0.042
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 271 VKVCFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
V CF C++ L+ C+ CP FH DCL MP G W C
Sbjct: 831 VSWCFVCSKG---GSLLCCESCPAAFHPDCLN---IEMPDGSWFC 869
Score = 37.0 bits (84), Expect = 0.093
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 34 DEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDH-CPAAFHLQCCNPPLSEEML 92
DE + K+ R A C C++ G LL C+ C AFHL C L
Sbjct: 645 DETQTEVSVSSKKSERGVTAKKEYVCQLCEKPGSLLLCEGPCCGAFHLAC----LGLSRR 700
Query: 93 PPGEWMCHRC 102
P G + C C
Sbjct: 701 PEGRFTCSEC 710
Score = 36.2 bits (82), Expect = 0.16
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 238 PGSSKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCD--YCPLL 295
P +S EE K KKT+ CF C L+ CD +C
Sbjct: 1206 PKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSEDECFRCGDG---GQLVLCDRKFCTKA 1262
Query: 296 FHMDCLEPPLTAMPLGRWMCPNH 318
+H+ CL L P G+W CP H
Sbjct: 1263 YHLSCLG--LGKRPFGKWECPWH 1283
>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 54.7 bits (130), Expect = 4e-07
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 45 KEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTV 104
++ +R N C C +GG LLCC+ CPAAFH C N +P G W C+ C
Sbjct: 820 RKGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNIE-----MPDGSWFCNDCRA 874
Query: 105 RRK 107
+K
Sbjct: 875 GKK 877
Score = 48.5 bits (114), Expect = 3e-05
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 31 PKTD---EAEKRSRKPEKEPRR-----SGRATNHDSCDSCKEGGDLLCCDH--CPAAFHL 80
PKT +E++ +K +K+ RR G+ + D C C +GG L+ CD C A+HL
Sbjct: 1206 PKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHL 1265
Query: 81 QCCNPPLSEEMLPPGEWMC--HRCTV 104
C L P G+W C H C V
Sbjct: 1266 SC----LGLGKRPFGKWECPWHHCDV 1287
Score = 38.1 bits (87), Expect = 0.042
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 271 VKVCFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
V CF C++ L+ C+ CP FH DCL MP G W C
Sbjct: 831 VSWCFVCSKG---GSLLCCESCPAAFHPDCLN---IEMPDGSWFC 869
Score = 37.0 bits (84), Expect = 0.093
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 34 DEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDH-CPAAFHLQCCNPPLSEEML 92
DE + K+ R A C C++ G LL C+ C AFHL C L
Sbjct: 645 DETQTEVSVSSKKSERGVTAKKEYVCQLCEKPGSLLLCEGPCCGAFHLAC----LGLSRR 700
Query: 93 PPGEWMCHRC 102
P G + C C
Sbjct: 701 PEGRFTCSEC 710
Score = 36.2 bits (82), Expect = 0.16
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 238 PGSSKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCD--YCPLL 295
P +S EE K KKT+ CF C L+ CD +C
Sbjct: 1206 PKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSEDECFRCGDG---GQLVLCDRKFCTKA 1262
Query: 296 FHMDCLEPPLTAMPLGRWMCPNH 318
+H+ CL L P G+W CP H
Sbjct: 1263 YHLSCLG--LGKRPFGKWECPWH 1283
>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 54.7 bits (130), Expect = 4e-07
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 45 KEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTV 104
++ +R N C C +GG LLCC+ CPAAFH C N +P G W C+ C
Sbjct: 820 RKGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNIE-----MPDGSWFCNDCRA 874
Query: 105 RRK 107
+K
Sbjct: 875 GKK 877
Score = 48.5 bits (114), Expect = 3e-05
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 31 PKTD---EAEKRSRKPEKEPRR-----SGRATNHDSCDSCKEGGDLLCCDH--CPAAFHL 80
PKT +E++ +K +K+ RR G+ + D C C +GG L+ CD C A+HL
Sbjct: 1206 PKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHL 1265
Query: 81 QCCNPPLSEEMLPPGEWMC--HRCTV 104
C L P G+W C H C V
Sbjct: 1266 SC----LGLGKRPFGKWECPWHHCDV 1287
Score = 38.1 bits (87), Expect = 0.042
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 271 VKVCFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
V CF C++ L+ C+ CP FH DCL MP G W C
Sbjct: 831 VSWCFVCSKG---GSLLCCESCPAAFHPDCLN---IEMPDGSWFC 869
Score = 37.0 bits (84), Expect = 0.093
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 34 DEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDH-CPAAFHLQCCNPPLSEEML 92
DE + K+ R A C C++ G LL C+ C AFHL C L
Sbjct: 645 DETQTEVSVSSKKSERGVTAKKEYVCQLCEKPGSLLLCEGPCCGAFHLAC----LGLSRR 700
Query: 93 PPGEWMCHRC 102
P G + C C
Sbjct: 701 PEGRFTCSEC 710
Score = 36.2 bits (82), Expect = 0.16
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 238 PGSSKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCD--YCPLL 295
P +S EE K KKT+ CF C L+ CD +C
Sbjct: 1206 PKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSEDECFRCGDG---GQLVLCDRKFCTKA 1262
Query: 296 FHMDCLEPPLTAMPLGRWMCPNH 318
+H+ CL L P G+W CP H
Sbjct: 1263 YHLSCLG--LGKRPFGKWECPWH 1283
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 54.7 bits (130), Expect = 4e-07
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 58 SCDSCKEGG----DLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKRE 110
+C +C+ G ++L CD C FH++CC+PPLS +P G W+C C ++K R+
Sbjct: 271 TCSACRVQGRNADNMLFCDSCDRGFHMECCDPPLSR--MPKGMWICQVCRPKKKGRK 325
Score = 47.0 bits (110), Expect = 9e-05
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 274 CFTCNRSCRVAP-----LIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
C TC+ +CRV ++ CD C FHM+C +PPL+ MP G W+C
Sbjct: 269 CKTCS-ACRVQGRNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWIC 314
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,149,079
Number of Sequences: 37866
Number of extensions: 2485362
Number of successful extensions: 12281
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 337
Number of HSP's that attempted gapping in prelim test: 10785
Number of HSP's gapped (non-prelim): 1665
length of query: 1004
length of database: 18,247,518
effective HSP length: 112
effective length of query: 892
effective length of database: 14,006,526
effective search space: 12493821192
effective search space used: 12493821192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.