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Search of human proteins with 73858561
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo
sapiens]
(333 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo sa... 657 0.0
gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo sa... 657 0.0
gi|73858559 proline/serine-rich coiled-coil 1 isoform c [Homo sa... 641 0.0
gi|52630338 proline/serine-rich coiled-coil 1 isoform b [Homo sa... 422 e-118
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 55 9e-08
gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens] 55 1e-07
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 54 2e-07
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 52 7e-07
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 52 7e-07
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 51 1e-06
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 51 1e-06
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 51 1e-06
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 51 1e-06
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ... 50 2e-06
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 50 3e-06
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 49 6e-06
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 49 6e-06
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 49 6e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 49 8e-06
gi|18959210 WIRE protein [Homo sapiens] 49 8e-06
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 47 2e-05
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 47 2e-05
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 47 2e-05
gi|33356148 formin-like 1 [Homo sapiens] 47 2e-05
gi|223633988 hypothetical protein LOC85379 [Homo sapiens] 47 2e-05
gi|239752069 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|239747180 PREDICTED: hypothetical protein XP_002343933 [Homo ... 47 2e-05
gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo ... 47 2e-05
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens] 47 2e-05
gi|27262653 ataxin 2 related protein isoform E [Homo sapiens] 47 2e-05
>gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo
sapiens]
Length = 333
Score = 657 bits (1695), Expect = 0.0
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ
Sbjct: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
Query: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK
Sbjct: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
Query: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL
Sbjct: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
Query: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAA 240
FPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAA
Sbjct: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAA 240
Query: 241 AKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGH 300
AKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGH
Sbjct: 241 AKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGH 300
Query: 301 KVPVSQRLNLPVMGATRSNLQPPRKVAVPGPTR 333
KVPVSQRLNLPVMGATRSNLQPPRKVAVPGPTR
Sbjct: 301 KVPVSQRLNLPVMGATRSNLQPPRKVAVPGPTR 333
>gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo
sapiens]
Length = 333
Score = 657 bits (1695), Expect = 0.0
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ
Sbjct: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
Query: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK
Sbjct: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
Query: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL
Sbjct: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
Query: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAA 240
FPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAA
Sbjct: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAA 240
Query: 241 AKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGH 300
AKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGH
Sbjct: 241 AKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGH 300
Query: 301 KVPVSQRLNLPVMGATRSNLQPPRKVAVPGPTR 333
KVPVSQRLNLPVMGATRSNLQPPRKVAVPGPTR
Sbjct: 301 KVPVSQRLNLPVMGATRSNLQPPRKVAVPGPTR 333
>gi|73858559 proline/serine-rich coiled-coil 1 isoform c [Homo
sapiens]
Length = 363
Score = 641 bits (1654), Expect = 0.0
Identities = 333/363 (91%), Positives = 333/363 (91%), Gaps = 30/363 (8%)
Query: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ
Sbjct: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
Query: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK
Sbjct: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
Query: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL
Sbjct: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
Query: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAAS---------------------------- 212
FPASKSPASSPLTRSTPPVRGRAGPSGRAAAS
Sbjct: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRVSGSGEFVGLTLKFLHPSP 240
Query: 213 --PPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPG 270
PPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPG
Sbjct: 241 PGPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPG 300
Query: 271 RGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPG 330
RGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPG
Sbjct: 301 RGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPG 360
Query: 331 PTR 333
PTR
Sbjct: 361 PTR 363
>gi|52630338 proline/serine-rich coiled-coil 1 isoform b [Homo
sapiens]
Length = 310
Score = 422 bits (1086), Expect = e-118
Identities = 216/229 (94%), Positives = 220/229 (96%)
Query: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ
Sbjct: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
Query: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK
Sbjct: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
Query: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL
Sbjct: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
Query: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSN 229
FPASKSPASSPLTRSTPPVRGRAGPSGRAAAS T + A QP+ ++
Sbjct: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATH 229
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 55.1 bits (131), Expect = 9e-08
Identities = 57/196 (29%), Positives = 78/196 (39%), Gaps = 17/196 (8%)
Query: 139 PSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPP 198
PSP R K S A + + + R + T + + SPAS PL R PP
Sbjct: 1833 PSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPP 1892
Query: 199 VRGRAG--PSGRAAASPPTPIRSVLAPQPSTSNSQ-RLPRPQGAAAKSSSQLPIPSAIPR 255
V AG P A+ P TP R++LA Q T S R+P Q A + P+ A+P
Sbjct: 1893 VTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARRGPP--PLARAVPE 1950
Query: 256 PASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNL----P 311
P R + + P RG R GL R ++A ES + ++L P
Sbjct: 1951 PGPRGRAGTEAGPGARGG--------RLGLVRVASALSSGSESSDRSGFRRQLTFIKESP 2002
Query: 312 VMGATRSNLQPPRKVA 327
+ RS L A
Sbjct: 2003 GLRRRRSELSSAESAA 2018
Score = 39.7 bits (91), Expect = 0.004
Identities = 72/297 (24%), Positives = 107/297 (36%), Gaps = 23/297 (7%)
Query: 12 VDETLDFGGLSPSDSREEEDITVLVTPEKP-LRRGLSHRSDPNAVAPAPQGVRLSLGP-- 68
V L G S S +T + E P LRR S S + A APQG G
Sbjct: 1975 VASALSSGSESSDRSGFRRQLTFI--KESPGLRRRRSELSSAESAASAPQGASPRRGRPA 2032
Query: 69 -----LSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRR---ETFVLK 120
L + EE+ + A Q R S GE R SP R +
Sbjct: 2033 LPAVFLCSSRCEELRAAPRQGPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAAR 2092
Query: 121 DSPVRDL--LPTVNSLTRST----PSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRE 174
V+ LP ++ R +P+S RS+D G R L + + +
Sbjct: 2093 PETVKRYASLPHISVARRPDGAVPAAPASADAARRSSD--GEPRPLPRVAAPGTTWRRIR 2150
Query: 175 SPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLP 234
S PA++ R + P AGP R + V AP+ ++S S L
Sbjct: 2151 DEDVPHILRSTLPATALPLRGSTPEDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLE 2210
Query: 235 RPQGAAAKSSSQLP-IPSAIPRPA-SRMPLTSRSVPPGRGALPPDSLSTRKGLPRPS 289
+ A + QL + S + P+ ++ P+++ V G G ++R G P S
Sbjct: 2211 TREPPGAPAGGQLSLLGSDVDGPSLAKAPISAPFVHEGLGVAVGGFPASRHGSPSRS 2267
Score = 37.0 bits (84), Expect = 0.025
Identities = 88/361 (24%), Positives = 119/361 (32%), Gaps = 79/361 (21%)
Query: 22 SPSDSREEEDITVLVTPEKPLRR----GLSHRSDPNAVAPAPQGVRLSLGPL--SPEKLE 75
SPS EE + ++ P RR GL R P+ RL P S E+ E
Sbjct: 1619 SPSPRAAEELLQRCISSALPRRRPPVSGLRRRK--------PRATRLDERPAEGSRERGE 1670
Query: 76 E-----------------ILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFV 118
E I + AN + L Q A RE++ E S +FV
Sbjct: 1671 EAAGSDRASDLDSVEWRAIQEGANSIVTWLHQAAAATREASSE---------SDSILSFV 1721
Query: 119 LKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTC 178
S L P + R R +++G+ + S + P+ ++ T
Sbjct: 1722 SGLSVGSTLQPPKHRKGRQAEGEMGSA---RRPEKRGAASVKTSGSPRSPAGPEKPRGTQ 1778
Query: 179 NLFPASKSP--------ASSPLTRSTPPVRGRAGPSG--RAAASP--PTPIRSVLAPQPS 226
P + SP R+ P +G GP R A P P P P
Sbjct: 1779 KTTPGVPAVLRGRTVIYVPSPAPRAQP--KGTPGPRATPRKVAPPCLAQPAAPAKVPSPG 1836
Query: 227 TSNSQRLPRPQGAAAKSSSQLPIPSAIP------RPASRMPLTS-------RSVPP---G 270
S+ L RP + ++ P SA P P+S TS R PP
Sbjct: 1837 QQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQA 1896
Query: 271 RGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPG 330
GALP S P P T + HK S + +P M PP AVP
Sbjct: 1897 AGALPGPGAS-----PVPKTPARTLLAKQHKTQRSP-VRIPFMQRPARRGPPPLARAVPE 1950
Query: 331 P 331
P
Sbjct: 1951 P 1951
>gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens]
Length = 739
Score = 54.7 bits (130), Expect = 1e-07
Identities = 87/355 (24%), Positives = 132/355 (37%), Gaps = 65/355 (18%)
Query: 5 EEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRL 64
+ED+ + DE DF LS S S ED V P R ++ + N P +
Sbjct: 25 KEDILLLADEKFDFD-LSLSSSSANEDDEVFFGPFGHKERCIAASLELNNPVPEQPPLPT 83
Query: 65 S-----LGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPR------------- 106
S PL+ EK E+ EA+ LA +E + A + PR
Sbjct: 84 SESPFAWSPLAGEKFVEVYKEAHLLALHIESSSRNQAAQAAKPEDPRSQGVERFIQESKL 143
Query: 107 ---------RVKPSP---RRETFVLKDSPVRDLLPTVNS--LTRSTPSPSSLTPRLRSND 152
+K SP +RET+ L DSP+ L P V L S+P+ S + R
Sbjct: 144 KINLFEKEKEMKKSPTSLKRETYYLSDSPL--LGPPVGEPRLLASSPALPSSGAQARLTR 201
Query: 153 RKGSVRALRATSGKRPSNMKRESPTCNL---FPASKSPASSPLTRSTPPVRGRAGPSGRA 209
G + A + RES T + + P + L VRGR+ P A
Sbjct: 202 APGPPHSAHA--------LPRESCTAHAASQAATQRKPGTKLLLPRAASVRGRSIPG--A 251
Query: 210 AASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPP 269
A P I P++ + ++P A K S + +P A +P +
Sbjct: 252 AEKPKKEI-------PASPSRTKIP-----AEKESHRDVLPDKPAPGAVNVPAAGSHLGQ 299
Query: 270 GRGALP-PDSLSTRKGLPRPSTAGHRVRESGHKVPV----SQRLNLPVMGATRSN 319
G+ A+P P+ L +K L + + + PV S P +G +S+
Sbjct: 300 GKRAIPVPNKLGLKKTLLKAPGSTSNLARKSSSGPVWSGASSACTSPAVGKAKSS 354
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 53.9 bits (128), Expect = 2e-07
Identities = 81/319 (25%), Positives = 119/319 (37%), Gaps = 31/319 (9%)
Query: 22 SPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEA 81
+P S V V+P + + H+ +P+P + P E E D+
Sbjct: 416 TPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSP-----APKPRKVELSESEEDKG 470
Query: 82 NRLAA-----QLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTR 136
++AA Q Q Q+++S+ + G R + +K+ V R
Sbjct: 471 GKMAAADSVQQRRQYRRQNQQSSSDS-GSSSSSEDERPKRSHVKNGEV-------GRRRR 522
Query: 137 STPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRST 196
+PS S+ +P R ++ S R R S P +R SP+ P + + P R T
Sbjct: 523 HSPSRSA-SPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT 581
Query: 197 P-PVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPR 255
P P R PS R SPP R +P P + P P+ A+ P P R
Sbjct: 582 PSPPPRRRSPSPR-RYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS------PSPPPKRR 634
Query: 256 PASRMPLTSRSVPPGRGALPPDSLSTRKG-LPRPSTAGHRVRESGHKVPVSQRLNLPVMG 314
+ P RS P + P S RKG P ST R + + S R P
Sbjct: 635 VSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAP--- 691
Query: 315 ATRSNLQPPRKVAVPGPTR 333
T S+ P R+ A P R
Sbjct: 692 QTSSSPPPVRRGASSSPQR 710
Score = 49.3 bits (116), Expect = 5e-06
Identities = 53/184 (28%), Positives = 72/184 (39%), Gaps = 37/184 (20%)
Query: 106 RRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSG 165
RR PSP + V P + RS+P +P L S RKGS +
Sbjct: 623 RRASPSPPPKRRVSHSPPPKQ---------RSSPVTKRRSPSLSSKHRKGSSPSRSTREA 673
Query: 166 KRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQP 225
+ P KR SP+ P ++P +S S PPVR R A+S P +S P P
Sbjct: 674 RSPQPNKRHSPS----PRPRAPQTSS---SPPPVR-------RGASSSPQRRQS---PSP 716
Query: 226 STSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGL 285
ST +R+ S+ P P I + AS P + R V R + +K
Sbjct: 717 STRPIRRV-----------SRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPP 765
Query: 286 PRPS 289
PS
Sbjct: 766 APPS 769
Score = 44.7 bits (104), Expect = 1e-04
Identities = 65/280 (23%), Positives = 110/280 (39%), Gaps = 40/280 (14%)
Query: 44 RGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGL 103
R HR+ + +PAP+ EK E+ + + ++++ ++Q+ S + L
Sbjct: 199 RSPRHRTKSRSPSPAPE---------KKEKTPELPEPS----VKVKEPSVQEATSTSDIL 245
Query: 104 G-------PRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRS---TPSPSSLTPRLRSNDR 153
P +PSP + + K+ S +RS + SPS PR R R
Sbjct: 246 KVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSR 305
Query: 154 KGSVRALRATSGKRPSNMKRESPTCNLFPASKSPAS-SPLTRSTPPVRGRAGPSGRAAA- 211
S R S +R + +R +P + P + S SP+ R +G S +++
Sbjct: 306 SRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSS 365
Query: 212 ---SPP--------TPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRM 260
SPP +P R PS S +R RP A P+ P+ ++R
Sbjct: 366 RSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPT--PQQSNRT 423
Query: 261 PLTSRSVPPGR--GALPPDSLSTRKGLPRPSTAGHRVRES 298
+ SV PGR G + + ++ P P+ +V S
Sbjct: 424 RKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELS 463
Score = 42.0 bits (97), Expect = 8e-04
Identities = 53/239 (22%), Positives = 88/239 (36%), Gaps = 27/239 (11%)
Query: 22 SPSDSREEEDITVLVTPEKPLRRGLSHRSDP---NAVAPAPQGVRLSLGPLSPEKLEEIL 78
SPS R I +P P +R + P A P R+S P ++ +
Sbjct: 590 SPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVT 649
Query: 79 DEANRLAAQLEQCALQDRESAGEGLGP---RRVKPSPRRETFVLKDSPVRDLLPTVNSLT 135
+ + + S E P +R PSPR SP P V
Sbjct: 650 KRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSP-----PPVRRGA 704
Query: 136 RSTP----SPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLF----PASKSP 187
S+P SPS T +R R + ++ + P +++R S + ++ PA+K P
Sbjct: 705 SSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 764
Query: 188 ASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQ 246
+ P PV+ ++ + SP P++ +P PS S + + G K +
Sbjct: 765 PAPP-----SPVQSQSPSTNW---SPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKK 815
Score = 33.9 bits (76), Expect = 0.21
Identities = 48/196 (24%), Positives = 72/196 (36%), Gaps = 23/196 (11%)
Query: 150 SNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRA 209
S +++ R+ R + PS +R SP S S + T+S P + +
Sbjct: 162 SREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP----SPAPEKK 217
Query: 210 AASPPTPIRSVLAPQPS----TSNS--------QRLPRPQGAAAKSSSQLPIPSAIPRPA 257
+P P SV +PS TS S + +P P+ + + +S+ RP
Sbjct: 218 EKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPR 277
Query: 258 SRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATR 317
SR SRS R P + R+ R + R R S + P +R P R
Sbjct: 278 SRSRSKSRSRTRSRS--PSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPP-----R 330
Query: 318 SNLQPPRKVAVPGPTR 333
PPR P R
Sbjct: 331 RMPPPPRHRRSRSPVR 346
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 52.0 bits (123), Expect = 7e-07
Identities = 67/226 (29%), Positives = 85/226 (37%), Gaps = 41/226 (18%)
Query: 104 GPRRVKPSPRRETF------VLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSV 157
GPR+ P P F L +R P +S S P TP +D+
Sbjct: 209 GPRQPSPGPTPPPFPGNRGTALGGGSIRQS-PLSSSSPFSNRPPLPPTPSRALDDKPPPP 267
Query: 158 RALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPI 217
G RPS + P P + PPV PS + A PP P
Sbjct: 268 PP---PVGNRPSIHREAVPP------------PPPQNNKPPVPSTPRPSASSQAPPPPPP 312
Query: 218 RSVLAP---QPSTSNSQRLPR-PQGAAAKSSSQLPIPS-----AIPRPASRMPLTSRSVP 268
S P PS+S + PR PQ + SSS P+PS +P P S P P
Sbjct: 313 PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDP 372
Query: 269 PGR-GALPPD-----SLSTRKGLPR----PSTAGHRVRESGHKVPV 304
PGR G LPP + ST + LP PS +G SG + P+
Sbjct: 373 PGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPL 418
Score = 38.9 bits (89), Expect = 0.006
Identities = 55/186 (29%), Positives = 71/186 (38%), Gaps = 29/186 (15%)
Query: 109 KPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSG--K 166
+PS RE + P ++ P V S R + S S P R G ++SG +
Sbjct: 274 RPSIHREA--VPPPPPQNNKPPVPSTPRPSAS-SQAPPPPPPPSRPGPPPLPPSSSGNDE 330
Query: 167 RPSNMKRESPTCNLFPASKSPASS------PLTRSTPPVRGRAGPSGRAAASPPTPIRSV 220
P +R + P SP S P R PPVR P GR+ PP P S
Sbjct: 331 TPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRD---PPGRSGPLPPPPPVS- 386
Query: 221 LAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAI--PRPASRMPLTSRSVPPGRGALPPDS 278
+ S S+ LP ++ QLP S + PR R PL G PP S
Sbjct: 387 ----RNGSTSRALP--------ATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPS 434
Query: 279 LSTRKG 284
S R G
Sbjct: 435 TSIRNG 440
Score = 33.9 bits (76), Expect = 0.21
Identities = 46/177 (25%), Positives = 69/177 (38%), Gaps = 35/177 (19%)
Query: 160 LRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRS 219
LR+T+ + + P L P +S ++ P + + P R PS + PP P R+
Sbjct: 111 LRSTANRDNDSGGSRPPL--LPPGGRSTSAKPFSPPSGPGRFPV-PSPGHRSGPPEPQRN 167
Query: 220 VLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSL 279
+ P PRP + S P+PS PRP +S P RG+ PP
Sbjct: 168 RMPP----------PRPDVGSKPDSIPPPVPST-PRPI-------QSSPHNRGS-PPVPG 208
Query: 280 STRKGLPRP-----------STAGHRVRES--GHKVPVSQRLNLPVMGATRSNLQPP 323
R+ P P + G +R+S P S R LP + + +PP
Sbjct: 209 GPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPP 265
Score = 31.2 bits (69), Expect = 1.3
Identities = 47/189 (24%), Positives = 66/189 (34%), Gaps = 55/189 (29%)
Query: 182 PASKSPA-SSPLTRSTPPV-------------------RGRAGPSGRAAASP-----PTP 216
P++ P SSP R +PPV RG A G SP P
Sbjct: 188 PSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFS 247
Query: 217 IRSVLAPQPSTSNSQRLPRPQGAAAK--------------SSSQLPIPSAIPRPASRMPL 262
R L P PS + + P P +++ P+PS PRP++
Sbjct: 248 NRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPST-PRPSASSQA 306
Query: 263 TSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQP 322
PP R PP LP PS++G+ + P + NL + +T P
Sbjct: 307 PPPPPPPSRPGPPP--------LP-PSSSGN------DETPRLPQRNLSLSSSTPPLPSP 351
Query: 323 PRKVAVPGP 331
R +P P
Sbjct: 352 GRSGPLPPP 360
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 52.0 bits (123), Expect = 7e-07
Identities = 67/226 (29%), Positives = 85/226 (37%), Gaps = 41/226 (18%)
Query: 104 GPRRVKPSPRRETF------VLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSV 157
GPR+ P P F L +R P +S S P TP +D+
Sbjct: 209 GPRQPSPGPTPPPFPGNRGTALGGGSIRQS-PLSSSSPFSNRPPLPPTPSRALDDKPPPP 267
Query: 158 RALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPI 217
G RPS + P P + PPV PS + A PP P
Sbjct: 268 PP---PVGNRPSIHREAVPP------------PPPQNNKPPVPSTPRPSASSQAPPPPPP 312
Query: 218 RSVLAP---QPSTSNSQRLPR-PQGAAAKSSSQLPIPS-----AIPRPASRMPLTSRSVP 268
S P PS+S + PR PQ + SSS P+PS +P P S P P
Sbjct: 313 PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDP 372
Query: 269 PGR-GALPPD-----SLSTRKGLPR----PSTAGHRVRESGHKVPV 304
PGR G LPP + ST + LP PS +G SG + P+
Sbjct: 373 PGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPL 418
Score = 38.9 bits (89), Expect = 0.006
Identities = 55/186 (29%), Positives = 71/186 (38%), Gaps = 29/186 (15%)
Query: 109 KPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSG--K 166
+PS RE + P ++ P V S R + S S P R G ++SG +
Sbjct: 274 RPSIHREA--VPPPPPQNNKPPVPSTPRPSAS-SQAPPPPPPPSRPGPPPLPPSSSGNDE 330
Query: 167 RPSNMKRESPTCNLFPASKSPASS------PLTRSTPPVRGRAGPSGRAAASPPTPIRSV 220
P +R + P SP S P R PPVR P GR+ PP P S
Sbjct: 331 TPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRD---PPGRSGPLPPPPPVS- 386
Query: 221 LAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAI--PRPASRMPLTSRSVPPGRGALPPDS 278
+ S S+ LP ++ QLP S + PR R PL G PP S
Sbjct: 387 ----RNGSTSRALP--------ATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPS 434
Query: 279 LSTRKG 284
S R G
Sbjct: 435 TSIRNG 440
Score = 33.9 bits (76), Expect = 0.21
Identities = 46/177 (25%), Positives = 69/177 (38%), Gaps = 35/177 (19%)
Query: 160 LRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRS 219
LR+T+ + + P L P +S ++ P + + P R PS + PP P R+
Sbjct: 111 LRSTANRDNDSGGSRPPL--LPPGGRSTSAKPFSPPSGPGRFPV-PSPGHRSGPPEPQRN 167
Query: 220 VLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSL 279
+ P PRP + S P+PS PRP +S P RG+ PP
Sbjct: 168 RMPP----------PRPDVGSKPDSIPPPVPST-PRPI-------QSSPHNRGS-PPVPG 208
Query: 280 STRKGLPRP-----------STAGHRVRES--GHKVPVSQRLNLPVMGATRSNLQPP 323
R+ P P + G +R+S P S R LP + + +PP
Sbjct: 209 GPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPP 265
Score = 31.2 bits (69), Expect = 1.3
Identities = 47/189 (24%), Positives = 66/189 (34%), Gaps = 55/189 (29%)
Query: 182 PASKSPA-SSPLTRSTPPV-------------------RGRAGPSGRAAASP-----PTP 216
P++ P SSP R +PPV RG A G SP P
Sbjct: 188 PSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFS 247
Query: 217 IRSVLAPQPSTSNSQRLPRPQGAAAK--------------SSSQLPIPSAIPRPASRMPL 262
R L P PS + + P P +++ P+PS PRP++
Sbjct: 248 NRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPST-PRPSASSQA 306
Query: 263 TSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQP 322
PP R PP LP PS++G+ + P + NL + +T P
Sbjct: 307 PPPPPPPSRPGPPP--------LP-PSSSGN------DETPRLPQRNLSLSSSTPPLPSP 351
Query: 323 PRKVAVPGP 331
R +P P
Sbjct: 352 GRSGPLPPP 360
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 51.2 bits (121), Expect = 1e-06
Identities = 62/302 (20%), Positives = 105/302 (34%), Gaps = 29/302 (9%)
Query: 35 LVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQ 94
+ TP+ + + P P R SL P S E L + ++
Sbjct: 99 VTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTT 158
Query: 95 DRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRK 154
+++++ +G + K + +ET ++ + +DL PT L + TP + T
Sbjct: 159 NKQTSTDG----KEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTT----KGPAL 210
Query: 155 GSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSP---LTRSTPPVRGRAGPSGRAAA 211
+ + T+ K P++ + PT ++ + P T+S P P+
Sbjct: 211 TTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP 270
Query: 212 SPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGR 271
+P TP P P+T+ P KS+ P A P P T + P
Sbjct: 271 APTTP----KEPAPTTTK-----EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAP-- 319
Query: 272 GALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQP-PRKVAVPG 330
P + T P P+T +E P P A + +P P P
Sbjct: 320 -TTPKEPTPTTPKEPAPTT-----KEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 373
Query: 331 PT 332
PT
Sbjct: 374 PT 375
Score = 39.7 bits (91), Expect = 0.004
Identities = 54/266 (20%), Positives = 95/266 (35%), Gaps = 27/266 (10%)
Query: 37 TPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDR 96
TP++P + PAP + P +P+KL E +LA + +
Sbjct: 454 TPKEPAPTTTKKPAPTTPKEPAPTTPK-ETAPTTPKKLTPTTPE--KLAPTTPE---KPA 507
Query: 97 ESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGS 156
+ E L P +P T + P T P+P++ + ++ +
Sbjct: 508 PTTPEELAPT----TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 563
Query: 157 VRALRATS-----GKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAA 211
+ T+ G P+ +K +PT PA K A + T + P+
Sbjct: 564 PTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT 623
Query: 212 SPPTPIRSVLAPQPSTSNSQRLPRPQGAA-------AKSSSQLPIPSAIPRPASRMPLTS 264
+P TP P P+T P+G A A ++ + P P + ++ P ++
Sbjct: 624 APTTP----KEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTST 679
Query: 265 RSVPPGRGALPPDSLSTRKGLPRPST 290
S P P ++ T P P+T
Sbjct: 680 TSDKPA-PTTPKETAPTTPKEPAPTT 704
Score = 35.4 bits (80), Expect = 0.072
Identities = 43/177 (24%), Positives = 64/177 (36%), Gaps = 14/177 (7%)
Query: 168 PSNMKRESPTCNLFPASKSPASSPLT---RSTPPVRGRAGPSGRAAASPPTPIR-SVLAP 223
P+ K+ +PT PA +P + T + TP + P+ +P TP + P
Sbjct: 460 PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTP 519
Query: 224 QPSTSNSQRLPRPQG--AAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGA--LPPDSL 279
+ T + P P AAA ++ + P P+ PA P P A P +
Sbjct: 520 EEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTA 579
Query: 280 STRKGLPRPST----AGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPGPT 332
T P P+T A + + K P S + P T P P PT
Sbjct: 580 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKP--APTTPKGTAPTTPKEPAPT 634
Score = 35.0 bits (79), Expect = 0.093
Identities = 47/228 (20%), Positives = 75/228 (32%), Gaps = 22/228 (9%)
Query: 110 PSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPS 169
P T + +P P + P+ + P + + T+ K P+
Sbjct: 259 PKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 318
Query: 170 --NMKRESPTCNLFPA--SKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQP 225
K +PT PA +K PA + P + P+ +P TP P P
Sbjct: 319 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP----KEPAP 374
Query: 226 STSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGL 285
+T+ P+ A ++ P + P P T++S P P + T
Sbjct: 375 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPT-----TTKSAP----TTPKEPSPTTTKE 425
Query: 286 PRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQP-PRKVAVPGPT 332
P P+T +E P P A + +P P P PT
Sbjct: 426 PAPTTP----KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 469
Score = 35.0 bits (79), Expect = 0.093
Identities = 46/203 (22%), Positives = 70/203 (34%), Gaps = 35/203 (17%)
Query: 135 TRSTPSPSSLTPRLRSNDRKGSVRALRATS--GKRPSNMKRESPTCNLFPASKSP-ASSP 191
T P+P L P + T+ G P+ K +PT PA +P ++P
Sbjct: 590 TPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAP 649
Query: 192 LTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQP-----STSNSQRLPRPQGAAAKSSSQ 246
T P A +P P LAP ST++ + P A ++ +
Sbjct: 650 TTLKEP-----------APTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 698
Query: 247 LPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQ 306
P P+ +PA P T + PP +ST P+T HK P
Sbjct: 699 EPAPTTPKKPA---PTTPETPPP-----TTSEVSTPTTTKEPTTI--------HKSPDES 742
Query: 307 RLNLPVMGATRSNLQPPRKVAVP 329
L ++ P++ VP
Sbjct: 743 TPELSAEPTPKALENSPKEPGVP 765
Score = 34.3 bits (77), Expect = 0.16
Identities = 41/176 (23%), Positives = 62/176 (35%), Gaps = 14/176 (7%)
Query: 129 PTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPA 188
PT +TP + T + A P+ K SPT PA +
Sbjct: 335 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 394
Query: 189 SSPLTRSTP-PVRGRAGPSGRAAASPPTPIRSVLA----PQPSTSNSQRLPRPQGAA--- 240
S+P T P P ++ P+ SP T P P+T P+ A
Sbjct: 395 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 454
Query: 241 ----AKSSSQLPIPSAIPRPASRMPL-TSRSVPPGRGALPPDSLS-TRKGLPRPST 290
A ++++ P P+ PA P T+ + P P+ L+ T P P+T
Sbjct: 455 PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTT 510
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 51.2 bits (121), Expect = 1e-06
Identities = 62/302 (20%), Positives = 105/302 (34%), Gaps = 29/302 (9%)
Query: 35 LVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQ 94
+ TP+ + + P P R SL P S E L + ++
Sbjct: 140 VTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTT 199
Query: 95 DRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRK 154
+++++ +G + K + +ET ++ + +DL PT L + TP + T
Sbjct: 200 NKQTSTDG----KEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTT----KGPAL 251
Query: 155 GSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSP---LTRSTPPVRGRAGPSGRAAA 211
+ + T+ K P++ + PT ++ + P T+S P P+
Sbjct: 252 TTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP 311
Query: 212 SPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGR 271
+P TP P P+T+ P KS+ P A P P T + P
Sbjct: 312 APTTP----KEPAPTTTK-----EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAP-- 360
Query: 272 GALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQP-PRKVAVPG 330
P + T P P+T +E P P A + +P P P
Sbjct: 361 -TTPKEPTPTTPKEPAPTT-----KEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 414
Query: 331 PT 332
PT
Sbjct: 415 PT 416
Score = 39.7 bits (91), Expect = 0.004
Identities = 54/266 (20%), Positives = 95/266 (35%), Gaps = 27/266 (10%)
Query: 37 TPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDR 96
TP++P + PAP + P +P+KL E +LA + +
Sbjct: 495 TPKEPAPTTTKKPAPTTPKEPAPTTPK-ETAPTTPKKLTPTTPE--KLAPTTPE---KPA 548
Query: 97 ESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGS 156
+ E L P +P T + P T P+P++ + ++ +
Sbjct: 549 PTTPEELAPT----TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 604
Query: 157 VRALRATS-----GKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAA 211
+ T+ G P+ +K +PT PA K A + T + P+
Sbjct: 605 PTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT 664
Query: 212 SPPTPIRSVLAPQPSTSNSQRLPRPQGAA-------AKSSSQLPIPSAIPRPASRMPLTS 264
+P TP P P+T P+G A A ++ + P P + ++ P ++
Sbjct: 665 APTTP----KEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTST 720
Query: 265 RSVPPGRGALPPDSLSTRKGLPRPST 290
S P P ++ T P P+T
Sbjct: 721 TSDKPA-PTTPKETAPTTPKEPAPTT 745
Score = 35.4 bits (80), Expect = 0.072
Identities = 43/177 (24%), Positives = 64/177 (36%), Gaps = 14/177 (7%)
Query: 168 PSNMKRESPTCNLFPASKSPASSPLT---RSTPPVRGRAGPSGRAAASPPTPIR-SVLAP 223
P+ K+ +PT PA +P + T + TP + P+ +P TP + P
Sbjct: 501 PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTP 560
Query: 224 QPSTSNSQRLPRPQG--AAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGA--LPPDSL 279
+ T + P P AAA ++ + P P+ PA P P A P +
Sbjct: 561 EEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTA 620
Query: 280 STRKGLPRPST----AGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPGPT 332
T P P+T A + + K P S + P T P P PT
Sbjct: 621 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKP--APTTPKGTAPTTPKEPAPT 675
Score = 35.0 bits (79), Expect = 0.093
Identities = 47/228 (20%), Positives = 75/228 (32%), Gaps = 22/228 (9%)
Query: 110 PSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPS 169
P T + +P P + P+ + P + + T+ K P+
Sbjct: 300 PKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 359
Query: 170 --NMKRESPTCNLFPA--SKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQP 225
K +PT PA +K PA + P + P+ +P TP P P
Sbjct: 360 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP----KEPAP 415
Query: 226 STSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGL 285
+T+ P+ A ++ P + P P T++S P P + T
Sbjct: 416 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPT-----TTKSAP----TTPKEPSPTTTKE 466
Query: 286 PRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQP-PRKVAVPGPT 332
P P+T +E P P A + +P P P PT
Sbjct: 467 PAPTTP----KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 510
Score = 35.0 bits (79), Expect = 0.093
Identities = 46/203 (22%), Positives = 70/203 (34%), Gaps = 35/203 (17%)
Query: 135 TRSTPSPSSLTPRLRSNDRKGSVRALRATS--GKRPSNMKRESPTCNLFPASKSP-ASSP 191
T P+P L P + T+ G P+ K +PT PA +P ++P
Sbjct: 631 TPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAP 690
Query: 192 LTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQP-----STSNSQRLPRPQGAAAKSSSQ 246
T P A +P P LAP ST++ + P A ++ +
Sbjct: 691 TTLKEP-----------APTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 739
Query: 247 LPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQ 306
P P+ +PA P T + PP +ST P+T HK P
Sbjct: 740 EPAPTTPKKPA---PTTPETPPP-----TTSEVSTPTTTKEPTTI--------HKSPDES 783
Query: 307 RLNLPVMGATRSNLQPPRKVAVP 329
L ++ P++ VP
Sbjct: 784 TPELSAEPTPKALENSPKEPGVP 806
Score = 34.3 bits (77), Expect = 0.16
Identities = 41/176 (23%), Positives = 62/176 (35%), Gaps = 14/176 (7%)
Query: 129 PTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPA 188
PT +TP + T + A P+ K SPT PA +
Sbjct: 376 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 435
Query: 189 SSPLTRSTP-PVRGRAGPSGRAAASPPTPIRSVLA----PQPSTSNSQRLPRPQGAA--- 240
S+P T P P ++ P+ SP T P P+T P+ A
Sbjct: 436 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 495
Query: 241 ----AKSSSQLPIPSAIPRPASRMPL-TSRSVPPGRGALPPDSLS-TRKGLPRPST 290
A ++++ P P+ PA P T+ + P P+ L+ T P P+T
Sbjct: 496 PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTT 551
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 51.2 bits (121), Expect = 1e-06
Identities = 62/302 (20%), Positives = 105/302 (34%), Gaps = 29/302 (9%)
Query: 35 LVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQ 94
+ TP+ + + P P R SL P S E L + ++
Sbjct: 192 VTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTT 251
Query: 95 DRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRK 154
+++++ +G + K + +ET ++ + +DL PT L + TP + T
Sbjct: 252 NKQTSTDG----KEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTT----KGPAL 303
Query: 155 GSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSP---LTRSTPPVRGRAGPSGRAAA 211
+ + T+ K P++ + PT ++ + P T+S P P+
Sbjct: 304 TTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP 363
Query: 212 SPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGR 271
+P TP P P+T+ P KS+ P A P P T + P
Sbjct: 364 APTTP----KEPAPTTTK-----EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAP-- 412
Query: 272 GALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQP-PRKVAVPG 330
P + T P P+T +E P P A + +P P P
Sbjct: 413 -TTPKEPTPTTPKEPAPTT-----KEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 466
Query: 331 PT 332
PT
Sbjct: 467 PT 468
Score = 39.7 bits (91), Expect = 0.004
Identities = 54/266 (20%), Positives = 95/266 (35%), Gaps = 27/266 (10%)
Query: 37 TPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDR 96
TP++P + PAP + P +P+KL E +LA + +
Sbjct: 547 TPKEPAPTTTKKPAPTTPKEPAPTTPK-ETAPTTPKKLTPTTPE--KLAPTTPE---KPA 600
Query: 97 ESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGS 156
+ E L P +P T + P T P+P++ + ++ +
Sbjct: 601 PTTPEELAPT----TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 656
Query: 157 VRALRATS-----GKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAA 211
+ T+ G P+ +K +PT PA K A + T + P+
Sbjct: 657 PTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT 716
Query: 212 SPPTPIRSVLAPQPSTSNSQRLPRPQGAA-------AKSSSQLPIPSAIPRPASRMPLTS 264
+P TP P P+T P+G A A ++ + P P + ++ P ++
Sbjct: 717 APTTP----KEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTST 772
Query: 265 RSVPPGRGALPPDSLSTRKGLPRPST 290
S P P ++ T P P+T
Sbjct: 773 TSDKPA-PTTPKETAPTTPKEPAPTT 797
Score = 35.4 bits (80), Expect = 0.072
Identities = 43/177 (24%), Positives = 64/177 (36%), Gaps = 14/177 (7%)
Query: 168 PSNMKRESPTCNLFPASKSPASSPLT---RSTPPVRGRAGPSGRAAASPPTPIR-SVLAP 223
P+ K+ +PT PA +P + T + TP + P+ +P TP + P
Sbjct: 553 PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTP 612
Query: 224 QPSTSNSQRLPRPQG--AAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGA--LPPDSL 279
+ T + P P AAA ++ + P P+ PA P P A P +
Sbjct: 613 EEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTA 672
Query: 280 STRKGLPRPST----AGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPGPT 332
T P P+T A + + K P S + P T P P PT
Sbjct: 673 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKP--APTTPKGTAPTTPKEPAPT 727
Score = 35.0 bits (79), Expect = 0.093
Identities = 47/228 (20%), Positives = 75/228 (32%), Gaps = 22/228 (9%)
Query: 110 PSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPS 169
P T + +P P + P+ + P + + T+ K P+
Sbjct: 352 PKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 411
Query: 170 --NMKRESPTCNLFPA--SKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQP 225
K +PT PA +K PA + P + P+ +P TP P P
Sbjct: 412 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP----KEPAP 467
Query: 226 STSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGL 285
+T+ P+ A ++ P + P P T++S P P + T
Sbjct: 468 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPT-----TTKSAP----TTPKEPSPTTTKE 518
Query: 286 PRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQP-PRKVAVPGPT 332
P P+T +E P P A + +P P P PT
Sbjct: 519 PAPTTP----KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 562
Score = 35.0 bits (79), Expect = 0.093
Identities = 46/203 (22%), Positives = 70/203 (34%), Gaps = 35/203 (17%)
Query: 135 TRSTPSPSSLTPRLRSNDRKGSVRALRATS--GKRPSNMKRESPTCNLFPASKSP-ASSP 191
T P+P L P + T+ G P+ K +PT PA +P ++P
Sbjct: 683 TPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAP 742
Query: 192 LTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQP-----STSNSQRLPRPQGAAAKSSSQ 246
T P A +P P LAP ST++ + P A ++ +
Sbjct: 743 TTLKEP-----------APTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 791
Query: 247 LPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQ 306
P P+ +PA P T + PP +ST P+T HK P
Sbjct: 792 EPAPTTPKKPA---PTTPETPPP-----TTSEVSTPTTTKEPTTI--------HKSPDES 835
Query: 307 RLNLPVMGATRSNLQPPRKVAVP 329
L ++ P++ VP
Sbjct: 836 TPELSAEPTPKALENSPKEPGVP 858
Score = 34.3 bits (77), Expect = 0.16
Identities = 41/176 (23%), Positives = 62/176 (35%), Gaps = 14/176 (7%)
Query: 129 PTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPA 188
PT +TP + T + A P+ K SPT PA +
Sbjct: 428 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 487
Query: 189 SSPLTRSTP-PVRGRAGPSGRAAASPPTPIRSVLA----PQPSTSNSQRLPRPQGAA--- 240
S+P T P P ++ P+ SP T P P+T P+ A
Sbjct: 488 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 547
Query: 241 ----AKSSSQLPIPSAIPRPASRMPL-TSRSVPPGRGALPPDSLS-TRKGLPRPST 290
A ++++ P P+ PA P T+ + P P+ L+ T P P+T
Sbjct: 548 PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTT 603
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 51.2 bits (121), Expect = 1e-06
Identities = 62/302 (20%), Positives = 105/302 (34%), Gaps = 29/302 (9%)
Query: 35 LVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQ 94
+ TP+ + + P P R SL P S E L + ++
Sbjct: 233 VTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTT 292
Query: 95 DRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRK 154
+++++ +G + K + +ET ++ + +DL PT L + TP + T
Sbjct: 293 NKQTSTDG----KEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTT----KGPAL 344
Query: 155 GSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSP---LTRSTPPVRGRAGPSGRAAA 211
+ + T+ K P++ + PT ++ + P T+S P P+
Sbjct: 345 TTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP 404
Query: 212 SPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGR 271
+P TP P P+T+ P KS+ P A P P T + P
Sbjct: 405 APTTP----KEPAPTTTK-----EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAP-- 453
Query: 272 GALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQP-PRKVAVPG 330
P + T P P+T +E P P A + +P P P
Sbjct: 454 -TTPKEPTPTTPKEPAPTT-----KEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 507
Query: 331 PT 332
PT
Sbjct: 508 PT 509
Score = 39.7 bits (91), Expect = 0.004
Identities = 54/266 (20%), Positives = 95/266 (35%), Gaps = 27/266 (10%)
Query: 37 TPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDR 96
TP++P + PAP + P +P+KL E +LA + +
Sbjct: 588 TPKEPAPTTTKKPAPTTPKEPAPTTPK-ETAPTTPKKLTPTTPE--KLAPTTPE---KPA 641
Query: 97 ESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGS 156
+ E L P +P T + P T P+P++ + ++ +
Sbjct: 642 PTTPEELAPT----TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 697
Query: 157 VRALRATS-----GKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAA 211
+ T+ G P+ +K +PT PA K A + T + P+
Sbjct: 698 PTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT 757
Query: 212 SPPTPIRSVLAPQPSTSNSQRLPRPQGAA-------AKSSSQLPIPSAIPRPASRMPLTS 264
+P TP P P+T P+G A A ++ + P P + ++ P ++
Sbjct: 758 APTTP----KEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTST 813
Query: 265 RSVPPGRGALPPDSLSTRKGLPRPST 290
S P P ++ T P P+T
Sbjct: 814 TSDKPA-PTTPKETAPTTPKEPAPTT 838
Score = 35.4 bits (80), Expect = 0.072
Identities = 43/177 (24%), Positives = 64/177 (36%), Gaps = 14/177 (7%)
Query: 168 PSNMKRESPTCNLFPASKSPASSPLT---RSTPPVRGRAGPSGRAAASPPTPIR-SVLAP 223
P+ K+ +PT PA +P + T + TP + P+ +P TP + P
Sbjct: 594 PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTP 653
Query: 224 QPSTSNSQRLPRPQG--AAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGA--LPPDSL 279
+ T + P P AAA ++ + P P+ PA P P A P +
Sbjct: 654 EEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTA 713
Query: 280 STRKGLPRPST----AGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPGPT 332
T P P+T A + + K P S + P T P P PT
Sbjct: 714 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKP--APTTPKGTAPTTPKEPAPT 768
Score = 35.0 bits (79), Expect = 0.093
Identities = 47/228 (20%), Positives = 75/228 (32%), Gaps = 22/228 (9%)
Query: 110 PSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPS 169
P T + +P P + P+ + P + + T+ K P+
Sbjct: 393 PKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 452
Query: 170 --NMKRESPTCNLFPA--SKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQP 225
K +PT PA +K PA + P + P+ +P TP P P
Sbjct: 453 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP----KEPAP 508
Query: 226 STSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGL 285
+T+ P+ A ++ P + P P T++S P P + T
Sbjct: 509 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPT-----TTKSAP----TTPKEPSPTTTKE 559
Query: 286 PRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQP-PRKVAVPGPT 332
P P+T +E P P A + +P P P PT
Sbjct: 560 PAPTTP----KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 603
Score = 35.0 bits (79), Expect = 0.093
Identities = 46/203 (22%), Positives = 70/203 (34%), Gaps = 35/203 (17%)
Query: 135 TRSTPSPSSLTPRLRSNDRKGSVRALRATS--GKRPSNMKRESPTCNLFPASKSP-ASSP 191
T P+P L P + T+ G P+ K +PT PA +P ++P
Sbjct: 724 TPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAP 783
Query: 192 LTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQP-----STSNSQRLPRPQGAAAKSSSQ 246
T P A +P P LAP ST++ + P A ++ +
Sbjct: 784 TTLKEP-----------APTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 832
Query: 247 LPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQ 306
P P+ +PA P T + PP +ST P+T HK P
Sbjct: 833 EPAPTTPKKPA---PTTPETPPP-----TTSEVSTPTTTKEPTTI--------HKSPDES 876
Query: 307 RLNLPVMGATRSNLQPPRKVAVP 329
L ++ P++ VP
Sbjct: 877 TPELSAEPTPKALENSPKEPGVP 899
Score = 34.3 bits (77), Expect = 0.16
Identities = 41/176 (23%), Positives = 62/176 (35%), Gaps = 14/176 (7%)
Query: 129 PTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPA 188
PT +TP + T + A P+ K SPT PA +
Sbjct: 469 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 528
Query: 189 SSPLTRSTP-PVRGRAGPSGRAAASPPTPIRSVLA----PQPSTSNSQRLPRPQGAA--- 240
S+P T P P ++ P+ SP T P P+T P+ A
Sbjct: 529 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 588
Query: 241 ----AKSSSQLPIPSAIPRPASRMPL-TSRSVPPGRGALPPDSLS-TRKGLPRPST 290
A ++++ P P+ PA P T+ + P P+ L+ T P P+T
Sbjct: 589 PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTT 644
>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
sapiens]
Length = 439
Score = 50.4 bits (119), Expect = 2e-06
Identities = 83/311 (26%), Positives = 113/311 (36%), Gaps = 51/311 (16%)
Query: 43 RRGLSHRSDPNAVAPAPQG------VRLSLGPL-SPEKLEEILDEANRLAAQLEQCALQD 95
R GL+H P +AP P R P+ SPE E ++A +CA+
Sbjct: 54 REGLAH--PPQGLAPPPTAGNRPHPTRKCTFPVPSPELGAGREGEVAGVSACGRRCAVLG 111
Query: 96 RESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKG 155
+A G R P R V D L T RS+P+ S++ L R+G
Sbjct: 112 VRAAARGQLNSRTAPRDRHRG-VGPDPGRETALGTATLSLRSSPTAGSVSTGLVGKQREG 170
Query: 156 SVRALRAT----SGKR---------PSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGR 202
RA G R P+ + R +P P S SP RS PP R +
Sbjct: 171 GNGPWRAPVFRLPGARLRLSSQLPSPTTLPRAAPLTPYRPGSPSPRGHSRLRSRPPTRAQ 230
Query: 203 AGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLP-IPSAIPRPASRMP 261
R A+P L+P P+ RP+G +S L P P R+P
Sbjct: 231 L----RVGANP-------LSPVPARLRGCHSVRPEGGGVRSCRTLGCCPPTSPHQPPRLP 279
Query: 262 LTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQ 321
+T P ALP SL + RP+ AG R S Q + + +
Sbjct: 280 VTP---VPQSVALP--SLQS----ARPAAAGAAPRLS------PQAARCTALSTEKPDRP 324
Query: 322 -PPRKVAVPGP 331
PPR+ P P
Sbjct: 325 GPPRRPPAPTP 335
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 50.1 bits (118), Expect = 3e-06
Identities = 70/267 (26%), Positives = 107/267 (40%), Gaps = 44/267 (16%)
Query: 66 LGPLSPEKLEEILDEANRLAAQ---LEQCALQ---DRESAGEGLGPRRVKPSPRRETFVL 119
LG + + +E +L N+++ + LE +++ R++ +G RR K S RRET
Sbjct: 1012 LGLVHMDVVELLLKSGNKISLRTTALENTSIKVGPARKNVAKGRMARRSKRSRRRETQDR 1071
Query: 120 KDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCN 179
+ S + + + L S S L L S++ SPT +
Sbjct: 1072 RKSLFKKISKQTSVLHTSRSFSSGLHHSLSSSESLPG------------------SPTHS 1113
Query: 180 LFPASKSPASSPL------TRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRL 233
L P+ +P SP T ++PP A PS + ASP + + +
Sbjct: 1114 LSPSPTTPCRSPAPDVPADTTASPP---SASPSSSSPASPAAAGHTRPSSLHGLAAKLGP 1170
Query: 234 PRPQGAAAKSSSQL-PIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPR----- 287
PRP+ KS+S + P P A P P S P S S PG P S R+G
Sbjct: 1171 PRPKTGRRKSTSSIPPSPLACP-PISAPPPRSPSPLPGHPPAPARSPRLRRGQSADKLGT 1229
Query: 288 ----PSTAGHRVRESGHKVPVSQRLNL 310
AG R R ++ V +RL+L
Sbjct: 1230 GERLDGEAGRRTRGPEAELVVMRRLHL 1256
Score = 29.3 bits (64), Expect = 5.1
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Query: 239 AAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRES 298
++++S P S P P + + VP A PP + + P+ AGH S
Sbjct: 1101 SSSESLPGSPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASPAAAGHTRPSS 1160
Query: 299 GHKVPVSQRLNLPVMGATRSNLQ-PPRKVAVP 329
H + P G +S PP +A P
Sbjct: 1161 LHGLAAKLGPPRPKTGRRKSTSSIPPSPLACP 1192
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 48.9 bits (115), Expect = 6e-06
Identities = 51/175 (29%), Positives = 70/175 (40%), Gaps = 21/175 (12%)
Query: 128 LPTVNSLTRSTPSPSSLTPRLRSN-DRKGSVRALRATSGKRPSNMKRESPTCNLF----P 182
LP V L ++ + SS R N + SV L + P + PT + P
Sbjct: 126 LPNVTFLPQNATTISS-----RENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPP 180
Query: 183 ASKSPASSPLTRSTPPVRGRAGPSGRA----AASPPTPIRSVLAP-----QPSTSNSQRL 233
+S +P + TP +A PS A A+PPTP + AP P T+ +
Sbjct: 181 SSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPT 240
Query: 234 PRPQGAAAKSSSQLPIPSAIPRPASRMPL--TSRSVPPGRGALPPDSLSTRKGLP 286
P A SSS P +A+P S L +S S PP A PP +T P
Sbjct: 241 PSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPP 295
Score = 35.0 bits (79), Expect = 0.093
Identities = 34/145 (23%), Positives = 47/145 (32%), Gaps = 6/145 (4%)
Query: 123 PVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLF- 181
P P S T P SS P + S P PT +
Sbjct: 186 PETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATT 245
Query: 182 PASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAA 241
PA S ++ P T + PP +A++PP + P +T P PQ A
Sbjct: 246 PAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTA 305
Query: 242 KSSSQLPIPSAIPRPASRMPLTSRS 266
PI + P + P TS +
Sbjct: 306 -----APITTPNSSPTTLAPDTSET 325
Score = 29.6 bits (65), Expect = 3.9
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 135 TRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTR 194
T + P+PS+ TP S+ A+ T PS + + + P + + +P +
Sbjct: 235 TAAPPTPSATTPAPLSSSAPPETTAVPPT----PSATTLDPSSASAPPETTAAPPTP-SA 289
Query: 195 STPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQ 237
+TP P AA TP S P TS + P Q
Sbjct: 290 TTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQ 332
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 48.9 bits (115), Expect = 6e-06
Identities = 51/175 (29%), Positives = 70/175 (40%), Gaps = 21/175 (12%)
Query: 128 LPTVNSLTRSTPSPSSLTPRLRSN-DRKGSVRALRATSGKRPSNMKRESPTCNLF----P 182
LP V L ++ + SS R N + SV L + P + PT + P
Sbjct: 126 LPNVTFLPQNATTISS-----RENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPP 180
Query: 183 ASKSPASSPLTRSTPPVRGRAGPSGRA----AASPPTPIRSVLAP-----QPSTSNSQRL 233
+S +P + TP +A PS A A+PPTP + AP P T+ +
Sbjct: 181 SSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPT 240
Query: 234 PRPQGAAAKSSSQLPIPSAIPRPASRMPL--TSRSVPPGRGALPPDSLSTRKGLP 286
P A SSS P +A+P S L +S S PP A PP +T P
Sbjct: 241 PSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPP 295
Score = 35.0 bits (79), Expect = 0.093
Identities = 34/145 (23%), Positives = 47/145 (32%), Gaps = 6/145 (4%)
Query: 123 PVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLF- 181
P P S T P SS P + S P PT +
Sbjct: 186 PETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATT 245
Query: 182 PASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAA 241
PA S ++ P T + PP +A++PP + P +T P PQ A
Sbjct: 246 PAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTA 305
Query: 242 KSSSQLPIPSAIPRPASRMPLTSRS 266
PI + P + P TS +
Sbjct: 306 -----APITTPNSSPTTLAPDTSET 325
Score = 29.6 bits (65), Expect = 3.9
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 135 TRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTR 194
T + P+PS+ TP S+ A+ T PS + + + P + + +P +
Sbjct: 235 TAAPPTPSATTPAPLSSSAPPETTAVPPT----PSATTLDPSSASAPPETTAAPPTP-SA 289
Query: 195 STPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQ 237
+TP P AA TP S P TS + P Q
Sbjct: 290 TTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQ 332
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 48.9 bits (115), Expect = 6e-06
Identities = 51/175 (29%), Positives = 70/175 (40%), Gaps = 21/175 (12%)
Query: 128 LPTVNSLTRSTPSPSSLTPRLRSN-DRKGSVRALRATSGKRPSNMKRESPTCNLF----P 182
LP V L ++ + SS R N + SV L + P + PT + P
Sbjct: 126 LPNVTFLPQNATTISS-----RENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPP 180
Query: 183 ASKSPASSPLTRSTPPVRGRAGPSGRA----AASPPTPIRSVLAP-----QPSTSNSQRL 233
+S +P + TP +A PS A A+PPTP + AP P T+ +
Sbjct: 181 SSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPT 240
Query: 234 PRPQGAAAKSSSQLPIPSAIPRPASRMPL--TSRSVPPGRGALPPDSLSTRKGLP 286
P A SSS P +A+P S L +S S PP A PP +T P
Sbjct: 241 PSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPP 295
Score = 35.0 bits (79), Expect = 0.093
Identities = 34/145 (23%), Positives = 47/145 (32%), Gaps = 6/145 (4%)
Query: 123 PVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLF- 181
P P S T P SS P + S P PT +
Sbjct: 186 PETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATT 245
Query: 182 PASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAA 241
PA S ++ P T + PP +A++PP + P +T P PQ A
Sbjct: 246 PAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTA 305
Query: 242 KSSSQLPIPSAIPRPASRMPLTSRS 266
PI + P + P TS +
Sbjct: 306 -----APITTPNSSPTTLAPDTSET 325
Score = 29.6 bits (65), Expect = 3.9
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 135 TRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTR 194
T + P+PS+ TP S+ A+ T PS + + + P + + +P +
Sbjct: 235 TAAPPTPSATTPAPLSSSAPPETTAVPPT----PSATTLDPSSASAPPETTAAPPTP-SA 289
Query: 195 STPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQ 237
+TP P AA TP S P TS + P Q
Sbjct: 290 TTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQ 332
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 48.5 bits (114), Expect = 8e-06
Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 27/195 (13%)
Query: 105 PRRVKP-SPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRAT 163
P V P SP+ T K++P P+V +L P++ P+ AL T
Sbjct: 867 PSAVTPLSPKGVTLPPKETPT----PSVVNLPFPKEGPATPAPK--------QAPALSMT 914
Query: 164 SGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRA--------AASPPT 215
S R +P PAS SP +P + P + GP+ + AA+PP+
Sbjct: 915 SSS--PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPS 972
Query: 216 PIRSVLAPQPS---TSNSQRLPRPQGAAAKSSSQ-LPIPSAIPRPASRMPLTSRSVPPGR 271
P P P T + P P+G A S + P P A+ P+ + + P G
Sbjct: 973 PKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGA 1032
Query: 272 GALPPDSLSTRKGLP 286
P + + KG P
Sbjct: 1033 STPPAATPPSPKGSP 1047
Score = 45.4 bits (106), Expect = 7e-05
Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 20/182 (10%)
Query: 120 KDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMK-----RE 174
KDSP PT S + P+PS++TP KG + T N+
Sbjct: 847 KDSPATTHSPTPPS-PKGAPTPSAVTPL----SPKGVTLPPKETPTPSVVNLPFPKEGPA 901
Query: 175 SPTCNLFPASKSPASSPL-TRSTPPVRG-RAGPSGRAAASPPTPIRSVLAPQPSTSNSQR 232
+P PA +SSP R+TP +G A PS + A +PP P+T + +
Sbjct: 902 TPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKW 961
Query: 233 LPRPQGA---AAKSSSQLPIPSAIPRPASRMPLTSR---SVPPGRGALPPDSLS--TRKG 284
P P A + K P P P P + P + + + P +GA P +++ + KG
Sbjct: 962 APTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKG 1021
Query: 285 LP 286
P
Sbjct: 1022 SP 1023
Score = 44.7 bits (104), Expect = 1e-04
Identities = 53/200 (26%), Positives = 76/200 (38%), Gaps = 21/200 (10%)
Query: 100 GEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRA 159
G P PSP+ +P+ PT + T +P TP L KG+
Sbjct: 1031 GASTPPAATPPSPKGSPAA---TPLPKGAPTTPAATLPSPKGGPATPSL-----KGAPTP 1082
Query: 160 LRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRS 219
AT SP P + +P S +TPP +G P+ AA+PP+P
Sbjct: 1083 PAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKG--APT-TPAATPPSPKGG 1139
Query: 220 VLAPQPS---TSNSQRLPRPQGAAAKSSSQ-LPIPSAIPRPASRMPLTS---RSVPPGRG 272
+ P P T+ + P P+G A + P A P+ + L + + P
Sbjct: 1140 LATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA 1199
Query: 273 ALPPDSLSTRKGLPRPSTAG 292
A PP S + GL PS G
Sbjct: 1200 ATPP---SPKGGLATPSPKG 1216
Score = 44.3 bits (103), Expect = 2e-04
Identities = 49/174 (28%), Positives = 64/174 (36%), Gaps = 35/174 (20%)
Query: 136 RSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASK-SPASSPLTR 194
+ P+P ++TP KGS A G +P P+ K SPA++PL +
Sbjct: 1006 KGAPTPPAVTPP----SPKGSPAATPFPKGA-------STPPAATPPSPKGSPAATPLPK 1054
Query: 195 STP---------PVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSS 245
P P G A PS + A +PP A PS P P+GA ++
Sbjct: 1055 GAPTTPAATLPSPKGGPATPSLKGAPTPPA------ATPPSPKGGPATPSPKGAPMPPAA 1108
Query: 246 QLPIPS---AIPRPASRMPLTSRSVPP----GRGALPPDSLSTRKGLPRPSTAG 292
P P A P P P T + PP G PP T PS G
Sbjct: 1109 TPPSPKGGLATP-PHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1161
Score = 43.1 bits (100), Expect = 3e-04
Identities = 69/276 (25%), Positives = 99/276 (35%), Gaps = 53/276 (19%)
Query: 38 PEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRE 97
P P +G + P A P+P+G GP +P + A + L
Sbjct: 1071 PATPSLKGAP--TPPAATPPSPKG-----GPATPSPKGAPMPPA--ATPPSPKGGLATPP 1121
Query: 98 SAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSV 157
G P PSP+ +P PT + T +P TP KG+
Sbjct: 1122 HKGAPTTPAATPPSPKGGLA----TPPPKGAPTTPAATPPSPKGGLATP-----PPKGAP 1172
Query: 158 RALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAA-----AS 212
AT + SP A +PA++P + P G A PS + A A+
Sbjct: 1173 TTPAATPPSPKGGLATPSPK----GAPTTPAATPPS----PKGGLATPSPKGAPTTPAAT 1224
Query: 213 PPTPIRSVLAPQPS---TSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSR---S 266
PP+P + P P T+ + P P+G A P P P P + P + + +
Sbjct: 1225 PPSPKGGLATPSPKGAPTTPAATPPSPKGGPA-----TPPPKGAPTPPAATPPSLKGGLA 1279
Query: 267 VPPGRGA------LPPD-----SLSTRKGLPRPSTA 291
PP +GA PP + S KG P P A
Sbjct: 1280 TPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAA 1315
Score = 40.8 bits (94), Expect = 0.002
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 182 PASKSPASSPLTRSTPPVRGRAGPSGRAA--ASPPTPIRSVLAPQ-----------PSTS 228
P+ + SP T+ P +G AGP +SP +P+ + P+ P+T+
Sbjct: 794 PSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATT 853
Query: 229 NSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRP 288
+S P P+GA P PSA+ PL+ + V LPP K P P
Sbjct: 854 HSPTPPSPKGA--------PTPSAV------TPLSPKGV-----TLPP------KETPTP 888
Query: 289 STAGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPGP 331
S + G P ++ P + T S+ P + A P P
Sbjct: 889 SVVNLPFPKEGPATPAPKQ--APALSMTSSS--PKKARATPAP 927
Score = 40.0 bits (92), Expect = 0.003
Identities = 63/264 (23%), Positives = 106/264 (40%), Gaps = 42/264 (15%)
Query: 105 PRRVKPSPRR--ETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRA 162
P PSP + T K +P + T +SL S SP+S+T ++ + + S + L A
Sbjct: 1617 PAVTPPSPEKGPATPAPKGTPTSPPV-TPSSLKDSPTSPASVTCKMGATVPQAS-KGLPA 1674
Query: 163 TSGKRPSNMKR-------ESPTCNLFPASKSPASSPLTRSTPPV-------RGRAGPSGR 208
G P+ +K ES P K P + + ++PP+ G GP
Sbjct: 1675 KKG--PTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLST 1732
Query: 209 AAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSA-----IPRPASRMPLT 263
A +P P++ + ++ P+ A +S + P+ +A +P+P S ++
Sbjct: 1733 VAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPES-ASVS 1791
Query: 264 SRSVPPGRGALPPDSLST--RKGLPRPSTAGHRVRESGHK--VPVSQRLNLPVM------ 313
+ PP L P + T K PS+ G V ES K P + LP++
Sbjct: 1792 AAPSPPVSLPLAPSPVPTLPPKQQFLPSSPG-LVLESPSKPLAPADEDELLPLIPPEPIS 1850
Query: 314 -----GATRSNLQPPRKVAVPGPT 332
+ N+ P+ +P PT
Sbjct: 1851 GGVPFQSVLVNMPTPKSAGIPVPT 1874
Score = 39.7 bits (91), Expect = 0.004
Identities = 55/218 (25%), Positives = 75/218 (34%), Gaps = 29/218 (13%)
Query: 137 STPSPSSL--TPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLF-PASKSPASSPLT 193
+TPSP TP KG + SP L P+ K ++P
Sbjct: 1187 ATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1246
Query: 194 RSTPPVRGRAGPSGRAAASPPTPIRSVL-----------APQPSTSNSQRLPRPQGAAAK 242
P G A P + A +PP L AP P+ P P+G A
Sbjct: 1247 TPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTP---PSPKGGPAT 1303
Query: 243 SSSQ-LPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLS--TRKGLP-----RPSTAGHR 294
S + P P A P+ P S PP +GA P +++ + KG P PS+ G
Sbjct: 1304 SPPKGAPTPPAATPPS---PKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGP 1360
Query: 295 VRESGHKVPVSQRLNLPVMGA-TRSNLQPPRKVAVPGP 331
S + P G + P R A+P P
Sbjct: 1361 TTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSP 1398
Score = 37.4 bits (85), Expect = 0.019
Identities = 58/243 (23%), Positives = 88/243 (36%), Gaps = 32/243 (13%)
Query: 105 PRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATS 164
P PSP+ + +P PT S ++ P+P + TP KG A+ S
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGGPTTPS-SKEGPTPPAATP-----SHKGGP-AMTPPS 1388
Query: 165 GKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPP--TPIRSVLA 222
KR + SP + + P S +TP R A + +PP TP+ A
Sbjct: 1389 PKRGPAIP--SPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKA 1446
Query: 223 PQ-------PSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALP 275
P P+T +S+ P S + P P + +S + P G LP
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLP 1506
Query: 276 PDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNL-----PVMGATRSNLQPPRKVAVPG 330
S+ K +P S + P++ L P A + L PP + VP
Sbjct: 1507 AVIPSSPKEVP--------ATPSSRRDPIAPTATLLSKKTPATLAPKEALIPP-AMTVPS 1557
Query: 331 PTR 333
P +
Sbjct: 1558 PKK 1560
Score = 36.6 bits (83), Expect = 0.032
Identities = 42/168 (25%), Positives = 64/168 (38%), Gaps = 29/168 (17%)
Query: 129 PTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRES---------PTCN 179
PT+ ++ S+P TP R + + L S K P+ + + P+
Sbjct: 1503 PTLPAVIPSSPKEVPATPSSRRDPIAPTATLL---SKKTPATLAPKEALIPPAMTVPSPK 1559
Query: 180 LFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGA 239
PA +P +P T PS + A+SPP S PS + L P
Sbjct: 1560 KTPAIPTPKEAPAT-----------PSSKEASSPPAVTPSTYKGAPS---PKELLIPPAV 1605
Query: 240 AAKSSSQLPIPSAIPRPA-SRMPLTSRSVPPGRGALPPDSLSTRKGLP 286
+ S + P P A+ P+ + P T P G PP + S+ K P
Sbjct: 1606 TSPSPKEAPTPPAVTPPSPEKGPAT--PAPKGTPTSPPVTPSSLKDSP 1651
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 48.5 bits (114), Expect = 8e-06
Identities = 45/165 (27%), Positives = 60/165 (36%), Gaps = 17/165 (10%)
Query: 129 PTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRE----SPTCNLFPAS 184
P S T S S+ P L S K P+ + + +P L P
Sbjct: 162 PNTTSSTGMKHSSSAPPPPPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGR 221
Query: 185 KSPASSPLTRSTP-PVRGRAGPSGRAAASPPTPIRSVLA-----PQPSTSNSQRLP---- 234
+ P + P + P PV R GPSG++ A PP P R P+ ++ LP
Sbjct: 222 EGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNESAPELPQRHN 281
Query: 235 ---RPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPP 276
R + + P SA P S P PP RGA PP
Sbjct: 282 SLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAPP 326
Score = 37.7 bits (86), Expect = 0.014
Identities = 61/239 (25%), Positives = 81/239 (33%), Gaps = 26/239 (10%)
Query: 35 LVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQ 94
L P G+ H S +A P P G R + P +P + A L Q
Sbjct: 159 LSRPNTTSSTGMKHSS--SAPPPPPPGRRANAPP-TPLPMHSSKAPAYNREKPLPPTPGQ 215
Query: 95 DRESAGEGL-GPRRVKPSPRRETFVLKDSPVRDLL-PTVNSLTRSTPSPSSLTPRLRSND 152
EG P VKP P SPV P+ SL + P P P N
Sbjct: 216 RLHPGREGPPAPPPVKPPP---------SPVNIRTGPSGQSL--APPPPPYRQPPGVPNG 264
Query: 153 RKGSVRALRATSGKRPSNMKRESP--TCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAA 210
+R +++ R++P L P + AS L + PP R PS AA
Sbjct: 265 PSSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAA 324
Query: 211 ASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPP 269
PP P+ + ++ P P S+ P P P SR P PP
Sbjct: 325 PPPPPPV--------IRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPP 375
Score = 30.4 bits (67), Expect = 2.3
Identities = 48/185 (25%), Positives = 70/185 (37%), Gaps = 27/185 (14%)
Query: 162 ATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPI--RS 219
A SG+ + + P + P+ L+R P G ++A PP P R+
Sbjct: 129 AASGRPQDDTDSSRASLPELPRMQRPSLPDLSR--PNTTSSTGMKHSSSAPPPPPPGRRA 186
Query: 220 VLAPQPSTSNSQRLP---RPQGAAAKSSSQL-------PIPSAIPRPASRMPLTSRSVPP 269
P P +S + P R + +L P P + P S P+ R+ P
Sbjct: 187 NAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPPS--PVNIRTGPS 244
Query: 270 GRG-ALPPDSLSTRKGLPR-PSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVA 327
G+ A PP G+P PS+ ES ++P QR N R P R +A
Sbjct: 245 GQSLAPPPPPYRQPPGVPNGPSSP---TNESAPELP--QRHN----SLHRKTPGPVRGLA 295
Query: 328 VPGPT 332
P PT
Sbjct: 296 PPPPT 300
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 47.4 bits (111), Expect = 2e-05
Identities = 42/133 (31%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 165 GKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQ 224
GK PS+ + T +F A + L P PS P P R + P+
Sbjct: 695 GKPPSSAQ----TAEIFQALQQECMRQL--QAPAGSPAPSPSPGGDDKPQVPPRVPIPPR 748
Query: 225 PSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLT-------SRSVPPGRGALPPD 277
P+ + Q P P G + +SQ P P++ PR R PL+ S VPPG LPP
Sbjct: 749 PTRPHVQLSPAPPGE--EETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPLPP- 805
Query: 278 SLSTRKGLPRPST 290
LS+ G P+T
Sbjct: 806 RLSSSPGKTMPTT 818
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 47.4 bits (111), Expect = 2e-05
Identities = 42/133 (31%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 165 GKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQ 224
GK PS+ + T +F A + L P PS P P R + P+
Sbjct: 773 GKPPSSAQ----TAEIFQALQQECMRQL--QAPAGSPAPSPSPGGDDKPQVPPRVPIPPR 826
Query: 225 PSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLT-------SRSVPPGRGALPPD 277
P+ + Q P P G + +SQ P P++ PR R PL+ S VPPG LPP
Sbjct: 827 PTRPHVQLSPAPPGE--EETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPLPP- 883
Query: 278 SLSTRKGLPRPST 290
LS+ G P+T
Sbjct: 884 RLSSSPGKTMPTT 896
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 47.4 bits (111), Expect = 2e-05
Identities = 76/289 (26%), Positives = 111/289 (38%), Gaps = 60/289 (20%)
Query: 89 EQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDL-LPTVNSLTRSTPSPSSLTPR 147
+QC D + LGP + S R TF DL L + +LT +TP+ SL
Sbjct: 234 KQCGQADTYQSP--LGPLFSQDSGRPFTFQ------SDLALLGLENLTTATPALGSLPA- 284
Query: 148 LRSNDRKGSVRALRATSGKRPS------NMKRESPTCNLFPASKSPASSPLTRSTPPVRG 201
+G+V T +R S +M P +K AS+ L P G
Sbjct: 285 --GRGPRGTVAPATPTKPQRTSPTNPHQHMAVGGPAQTPLLPAKLSASNALDPMLPASVG 342
Query: 202 RAGPSGRAAASPP------TPIRSVLAPQPSTSNSQ----RLPRPQGAAAKSS------- 244
+ + R AA+ P T I L +PS ++ + P P A SS
Sbjct: 343 GSTRTPRPAAAQPSQKITATKIPKSLPTKPSAPSTSIVPIKSPHPTQKTAPSSFTKSALP 402
Query: 245 -------SQLPIPSAIPRPAS----RMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGH 293
+ P+P+ + RPA R P R PP LPP + S++K +P +
Sbjct: 403 TQKQVPPTSRPVPARVSRPAEKPIQRNPGMPRPPPPSTRPLPPTTSSSKKPIPTLARTEA 462
Query: 294 RV----------RESGHKVPVSQRLN---LPVMGATRSNLQPPRKVAVP 329
++ R S HK P L+ P G+TRS +PP + P
Sbjct: 463 KITSHASKPASARTSTHKPPPFTALSSSPAPTPGSTRST-RPPATMVPP 510
Score = 36.2 bits (82), Expect = 0.042
Identities = 70/323 (21%), Positives = 106/323 (32%), Gaps = 44/323 (13%)
Query: 37 TPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDR 96
TP KP R ++ AV Q PL P KL +N L L
Sbjct: 296 TPTKPQRTSPTNPHQHMAVGGPAQT------PLLPAKLSA----SNALDPMLPASV---- 341
Query: 97 ESAGEGLGPRRVKPSPRRE---TFVLKDSPVRDLLPTVNSLTRSTPSPSSLT-PRLRSND 152
G PR P ++ T + K P + P+ + + +P P+ T P +
Sbjct: 342 --GGSTRTPRPAAAQPSQKITATKIPKSLPTKPSAPSTSIVPIKSPHPTQKTAPSSFTKS 399
Query: 153 RKGSVRALRATSGKRPSNMKRES---------------PTCNLFPASKSPASSP---LTR 194
+ + + TS P+ + R + P+ P + S + P L R
Sbjct: 400 ALPTQKQVPPTSRPVPARVSRPAEKPIQRNPGMPRPPPPSTRPLPPTTSSSKKPIPTLAR 459
Query: 195 STPPVRGRAGPSGRAAAS-----PPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPI 249
+ + A A S P T + S AP P ++ S R P +S
Sbjct: 460 TEAKITSHASKPASARTSTHKPPPFTALSSSPAPTPGSTRSTRPPATMVPPTSGTSTPRT 519
Query: 250 PSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLP-RPSTAGHRVRESGHKVPVSQRL 308
A+P P S + + + S RK +P RP A V S S R
Sbjct: 520 APAVPTPGSAPTGSKKPIGSEASKKAGPKSSPRKPVPLRPGKAARDVPLSDLTTRPSPRQ 579
Query: 309 NLPVMGATRSNLQPPRKVAVPGP 331
P T + + P + P
Sbjct: 580 PQPSQQTTPALVLAPAQFLSSSP 602
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 47.4 bits (111), Expect = 2e-05
Identities = 59/254 (23%), Positives = 96/254 (37%), Gaps = 40/254 (15%)
Query: 70 SPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLP 129
S K+ E+ + ++ +LE L++R S +G R P P + +P R
Sbjct: 422 SMAKIAELEKQLSQARKELE--TLRERFSESTAMGASRRPPEPEKAP---PAAPTR---- 472
Query: 130 TVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKR---ESPTCNLFPASKS 186
PS+L ++ + KG +R LR + +P+ P
Sbjct: 473 -----------PSALELKVEELEEKGLIRILRGPGDAVSIEILPVAVATPSGGDAPTPGV 521
Query: 187 PASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQ 246
P SP +P + A P+ AA PP P+ + +PQ + ++ P + +
Sbjct: 522 PTGSP----SPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPA 577
Query: 247 LPIPSAIPRPASRMPL---TSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESG---- 299
P+P +P P P T VPP PP G P P G R E G
Sbjct: 578 PPLPGDLPPPPPPPPPPPGTDGPVPP-----PPPPPPPPPGGP-PDALGRRDSELGPGVK 631
Query: 300 HKVPVSQRLNLPVM 313
K P+ + +P++
Sbjct: 632 AKKPIQTKFRMPLL 645
>gi|223633988 hypothetical protein LOC85379 [Homo sapiens]
Length = 1806
Score = 47.0 bits (110), Expect = 2e-05
Identities = 76/274 (27%), Positives = 105/274 (38%), Gaps = 63/274 (22%)
Query: 21 LSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDE 80
L+P +E+D+ +P LR P++ P+P G LS E + LD
Sbjct: 66 LAPKPFSKEQDVK---SPVPSLR--------PSSTGPSPSG------GLSEEPAAKDLD- 107
Query: 81 ANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPS 140
NR+ + Q G G GPR P + F+ S L T S
Sbjct: 108 -NRMPGLVGQ-------EVGSGEGPRTSSPLFNKAVFLRPSSSTMILFETTKS------- 152
Query: 141 PSSLTPRLRSNDRKGSVRALRATSGKRPS-NMKRESPTCNLFPASKSPASSPLTRST-PP 198
P L +G+ A SG RP K PT PA P S+PL++ T PP
Sbjct: 153 ----GPALGKAVSEGAEEAKLGVSGSRPEVAAKPALPTQK--PAGTLPRSAPLSQDTKPP 206
Query: 199 V----RGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIP 254
V G+ P +A++ T R ++ P+P RL R +A + S P
Sbjct: 207 VPQEEAGQDHPPSKASSVEDT-ARPLVEPRP------RLKRRPVSAIFTESIQP-----Q 254
Query: 255 RPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRP 288
+P T VPP PP+ RK PRP
Sbjct: 255 KPGPGAAATVGKVPP----TPPEKTWVRK--PRP 282
Score = 32.3 bits (72), Expect = 0.61
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 17/185 (9%)
Query: 155 GSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTR---STPPVRGRAG--PSGRA 209
GS+ L A G K E+ T F + + +P R + P+R A P R
Sbjct: 8 GSITPLTAVPGLGEMG-KEETLTRTYFLQAGEASGAPPARILEAKSPLRSPARLLPLPRL 66
Query: 210 AASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPP 269
A P + + V +P PS S P P G ++ + + + +P L + V
Sbjct: 67 APKPFSKEQDVKSPVPSLRPSSTGPSPSGGLSEEPAAKDLDNRMP------GLVGQEVGS 120
Query: 270 GRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP-----VSQRLNLPVMGATRSNLQPPR 324
G G L + RPS++ + E+ P VS+ +G + S +
Sbjct: 121 GEGPRTSSPLFNKAVFLRPSSSTMILFETTKSGPALGKAVSEGAEEAKLGVSGSRPEVAA 180
Query: 325 KVAVP 329
K A+P
Sbjct: 181 KPALP 185
>gi|239752069 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 47.0 bits (110), Expect = 2e-05
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 24/173 (13%)
Query: 122 SPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGK--------RPSNMKR 173
S R LP+V + T S ++ RS+ + GS+ LR RP + +
Sbjct: 39 SASRPALPSVGAAP--TSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARA 96
Query: 174 ESPTCNLFPASKSPASS--PLTRS-TPPVRGRAGPSGRAAASPPTPI----RSVLAPQPS 226
+ + P ++S A S PL R T P RG S + PTP+ R + AP +
Sbjct: 97 ATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGN 156
Query: 227 TSNSQR----LPRPQGAAAKSSSQLPIPSAIPRPASRMPLTS---RSVPPGRG 272
+ S+R P P GA A ++ P + PRP + + + S+ PG G
Sbjct: 157 CARSRREGPSRPAPTGARALGAACTPRAPSAPRPTAHLGFVNSGRESLGPGEG 209
Score = 32.0 bits (71), Expect = 0.79
Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 13/147 (8%)
Query: 184 SKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKS 243
S S + P + P RA + +++ P I ++ + PRP A A +
Sbjct: 39 SASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAAT 98
Query: 244 SSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP 303
++ P A SR+PL + P RG + S L RP+ G R R
Sbjct: 99 AAVSRGPRARSSACSRLPLPRKLTEPERGG---GAQSQASQLIRPTPLGTRERP------ 149
Query: 304 VSQRLNLPVMGATRSNLQPPRKVAVPG 330
L P RS + P + A G
Sbjct: 150 ----LAAPPGNCARSRREGPSRPAPTG 172
>gi|239747180 PREDICTED: hypothetical protein XP_002343933 [Homo
sapiens]
Length = 1595
Score = 47.0 bits (110), Expect = 2e-05
Identities = 76/274 (27%), Positives = 105/274 (38%), Gaps = 63/274 (22%)
Query: 21 LSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDE 80
L+P +E+D+ +P LR P++ P+P G LS E + LD
Sbjct: 66 LAPKPFSKEQDVK---SPVPSLR--------PSSTGPSPSG------GLSEEPAAKDLD- 107
Query: 81 ANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPS 140
NR+ + Q G G GPR P + F+ S L T S
Sbjct: 108 -NRMPGLVGQ-------EVGSGEGPRTSSPLFNKAVFLRPSSSTMILFETTKS------- 152
Query: 141 PSSLTPRLRSNDRKGSVRALRATSGKRPS-NMKRESPTCNLFPASKSPASSPLTRST-PP 198
P L +G+ A SG RP K PT PA P S+PL++ T PP
Sbjct: 153 ----GPALGKAVSEGAEEAKLGVSGSRPEVAAKPALPTQK--PAGTLPRSAPLSQDTKPP 206
Query: 199 V----RGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIP 254
V G+ P +A++ T R ++ P+P RL R +A + S P
Sbjct: 207 VPQEEAGQDHPPSKASSVEDT-ARPLVEPRP------RLKRRPVSAIFTESIQP-----Q 254
Query: 255 RPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRP 288
+P T VPP PP+ RK PRP
Sbjct: 255 KPGPGAAATVGKVPP----TPPEKTWVRK--PRP 282
Score = 32.3 bits (72), Expect = 0.61
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 17/185 (9%)
Query: 155 GSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTR---STPPVRGRAG--PSGRA 209
GS+ L A G K E+ T F + + +P R + P+R A P R
Sbjct: 8 GSITPLTAVPGLGEMG-KEETLTRTYFLQAGEASGAPPARILEAKSPLRSPARLLPLPRL 66
Query: 210 AASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPP 269
A P + + V +P PS S P P G ++ + + + +P L + V
Sbjct: 67 APKPFSKEQDVKSPVPSLRPSSTGPSPSGGLSEEPAAKDLDNRMP------GLVGQEVGS 120
Query: 270 GRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP-----VSQRLNLPVMGATRSNLQPPR 324
G G L + RPS++ + E+ P VS+ +G + S +
Sbjct: 121 GEGPRTSSPLFNKAVFLRPSSSTMILFETTKSGPALGKAVSEGAEEAKLGVSGSRPEVAA 180
Query: 325 KVAVP 329
K A+P
Sbjct: 181 KPALP 185
>gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo
sapiens]
Length = 216
Score = 47.0 bits (110), Expect = 2e-05
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 24/173 (13%)
Query: 122 SPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGK--------RPSNMKR 173
S R LP+V + T S ++ RS+ + GS+ LR RP + +
Sbjct: 39 SASRPALPSVGAAP--TSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARA 96
Query: 174 ESPTCNLFPASKSPASS--PLTRS-TPPVRGRAGPSGRAAASPPTPI----RSVLAPQPS 226
+ + P ++S A S PL R T P RG S + PTP+ R + AP +
Sbjct: 97 ATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGN 156
Query: 227 TSNSQR----LPRPQGAAAKSSSQLPIPSAIPRPASRMPLTS---RSVPPGRG 272
+ S+R P P GA A ++ P + PRP + + + S+ PG G
Sbjct: 157 CARSRREGPSRPAPTGARALGAACTPRAPSAPRPTAHLGFVNSGRESLGPGEG 209
Score = 32.0 bits (71), Expect = 0.79
Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 13/147 (8%)
Query: 184 SKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKS 243
S S + P + P RA + +++ P I ++ + PRP A A +
Sbjct: 39 SASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAAT 98
Query: 244 SSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP 303
++ P A SR+PL + P RG + S L RP+ G R R
Sbjct: 99 AAVSRGPRARSSACSRLPLPRKLTEPERGG---GAQSQASQLIRPTPLGTRERP------ 149
Query: 304 VSQRLNLPVMGATRSNLQPPRKVAVPG 330
L P RS + P + A G
Sbjct: 150 ----LAAPPGNCARSRREGPSRPAPTG 172
>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
Length = 1062
Score = 47.0 bits (110), Expect = 2e-05
Identities = 66/232 (28%), Positives = 90/232 (38%), Gaps = 44/232 (18%)
Query: 75 EEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSL 134
EE R + E +L RE L P+RV+ PR VR +S
Sbjct: 324 EEKHSAVQRQGSGRESPSLASREGKYIPL-PQRVREGPR--------GGVR-----CSSS 369
Query: 135 TRSTPSPSSLTPR---LRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSP 191
P SSL PR N G R +G PS M P ++ P
Sbjct: 370 RGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGG-PSRMS---------PKAQRPLRGA 419
Query: 192 LTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPS 251
T S+P R PSG + PP + + P+ S + P P A S + PI S
Sbjct: 420 KTLSSPSNR----PSGETSVPPPPAVGRMYPPRSPKSAA---PAPISA---SCPEPPIGS 469
Query: 252 AIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP 303
A+P ++ +P+TS PG G++ P S P+ S A V+E K P
Sbjct: 470 AVPTSSASIPVTSSVSDPGVGSISPAS-------PKISLAPTDVKELSTKEP 514
Score = 29.6 bits (65), Expect = 3.9
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 167 RPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAA--SPPTPIRSVLAPQ 224
+P +++ S P ++ A P ++PP G GP +AA PP L P
Sbjct: 3 KPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPV 62
Query: 225 PSTSNSQRLPRPQGAAAKSSSQLPIPSA-IPRPASRMPLTSRSVPPGRGALPPDS 278
+ + R +GA + Q P P RP + ++R G+G PP S
Sbjct: 63 AAAGSGLR----RGAEGILAPQPPPPQQHQERPGAAAIGSARGQSTGKG--PPQS 111
>gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]
Length = 1044
Score = 47.0 bits (110), Expect = 2e-05
Identities = 66/232 (28%), Positives = 90/232 (38%), Gaps = 44/232 (18%)
Query: 75 EEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSL 134
EE R + E +L RE L P+RV+ PR VR +S
Sbjct: 324 EEKHSAVQRQGSGRESPSLASREGKYIPL-PQRVREGPR--------GGVR-----CSSS 369
Query: 135 TRSTPSPSSLTPR---LRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSP 191
P SSL PR N G R +G PS M P ++ P
Sbjct: 370 RGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGG-PSRMS---------PKAQRPLRGA 419
Query: 192 LTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPS 251
T S+P R PSG + PP + + P+ S + P P A S + PI S
Sbjct: 420 KTLSSPSNR----PSGETSVPPPPAVGRMYPPRSPKSAA---PAPISA---SCPEPPIGS 469
Query: 252 AIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP 303
A+P ++ +P+TS PG G++ P S P+ S A V+E K P
Sbjct: 470 AVPTSSASIPVTSSVSDPGVGSISPAS-------PKISLAPTDVKELSTKEP 514
Score = 29.6 bits (65), Expect = 3.9
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 167 RPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAA--SPPTPIRSVLAPQ 224
+P +++ S P ++ A P ++PP G GP +AA PP L P
Sbjct: 3 KPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPV 62
Query: 225 PSTSNSQRLPRPQGAAAKSSSQLPIPSA-IPRPASRMPLTSRSVPPGRGALPPDS 278
+ + R +GA + Q P P RP + ++R G+G PP S
Sbjct: 63 AAAGSGLR----RGAEGILAPQPPPPQQHQERPGAAAIGSARGQSTGKG--PPQS 111
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,703,321
Number of Sequences: 37866
Number of extensions: 1078587
Number of successful extensions: 9522
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 1237
Number of HSP's that attempted gapping in prelim test: 6299
Number of HSP's gapped (non-prelim): 3382
length of query: 333
length of database: 18,247,518
effective HSP length: 103
effective length of query: 230
effective length of database: 14,347,320
effective search space: 3299883600
effective search space used: 3299883600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.