Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 73747881
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo
sapiens]
(2961 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sap... 5952 0.0
gi|41872646 cullin 7 [Homo sapiens] 98 1e-19
gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo... 93 4e-18
gi|157738609 HECT domain containing 3 [Homo sapiens] 92 1e-17
gi|126032348 hect domain and RLD 2 [Homo sapiens] 87 2e-16
gi|150170706 anaphase promoting complex subunit 10 [Homo sapiens] 51 2e-05
gi|157885806 chromosome 12 open reading frame 51 [Homo sapiens] 44 0.002
gi|214830451 sequestosome 1 isoform 2 [Homo sapiens] 43 0.004
gi|214830438 sequestosome 1 isoform 2 [Homo sapiens] 43 0.004
gi|4505571 sequestosome 1 isoform 1 [Homo sapiens] 43 0.004
gi|157364926 dystrotelin [Homo sapiens] 43 0.005
gi|46852178 potassium channel modulatory factor 1 [Homo sapiens] 42 0.009
gi|21264330 mindbomb homolog 2 [Homo sapiens] 40 0.034
gi|119943102 CREB binding protein isoform b [Homo sapiens] 40 0.045
gi|119943104 CREB binding protein isoform a [Homo sapiens] 40 0.045
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 39 0.058
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 39 0.076
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 39 0.076
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 39 0.076
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 39 0.076
gi|221139926 NHS-like 1 [Homo sapiens] 39 0.100
gi|50345997 E1A binding protein p300 [Homo sapiens] 39 0.100
gi|122056617 LIM domain binding 3 isoform 3 [Homo sapiens] 39 0.100
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 39 0.100
gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo ... 38 0.13
gi|14110378 neighbor of BRCA1 gene 1 [Homo sapiens] 38 0.17
gi|14110375 neighbor of BRCA1 gene 1 [Homo sapiens] 38 0.17
gi|14110381 neighbor of BRCA1 gene 1 [Homo sapiens] 38 0.17
gi|42717999 dystrobrevin alpha isoform 2 [Homo sapiens] 38 0.17
gi|42718005 dystrobrevin alpha isoform 1 [Homo sapiens] 38 0.17
>gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sapiens]
Length = 2961
Score = 5952 bits (15441), Expect = 0.0
Identities = 2961/2961 (100%), Positives = 2961/2961 (100%)
Query: 1 MGNAPSHSSEDEAAAAGGEGWGPHQDWAAVSGTTPGPGVAAPALPPAAALLEPARLREAA 60
MGNAPSHSSEDEAAAAGGEGWGPHQDWAAVSGTTPGPGVAAPALPPAAALLEPARLREAA
Sbjct: 1 MGNAPSHSSEDEAAAAGGEGWGPHQDWAAVSGTTPGPGVAAPALPPAAALLEPARLREAA 60
Query: 61 AALLPTPPCESLVSRHRGALFRWLEERLGRGEESVTLEQFRELLEARGAGCSSEQFEEAF 120
AALLPTPPCESLVSRHRGALFRWLEERLGRGEESVTLEQFRELLEARGAGCSSEQFEEAF
Sbjct: 61 AALLPTPPCESLVSRHRGALFRWLEERLGRGEESVTLEQFRELLEARGAGCSSEQFEEAF 120
Query: 121 AQFDAEGDGTVDAENMLEALKNSSGANLQGELSHIIRQLQACSLVPGFTDIFSESKEGLD 180
AQFDAEGDGTVDAENMLEALKNSSGANLQGELSHIIRQLQACSLVPGFTDIFSESKEGLD
Sbjct: 121 AQFDAEGDGTVDAENMLEALKNSSGANLQGELSHIIRQLQACSLVPGFTDIFSESKEGLD 180
Query: 181 IHSSMILRFLHRNRLSSAVMPYPMLEHCNNMCTMRSSVLKESLDQLVQKEKESPGDLTRS 240
IHSSMILRFLHRNRLSSAVMPYPMLEHCNNMCTMRSSVLKESLDQLVQKEKESPGDLTRS
Sbjct: 181 IHSSMILRFLHRNRLSSAVMPYPMLEHCNNMCTMRSSVLKESLDQLVQKEKESPGDLTRS 240
Query: 241 PEMDKLKSVAKCYAYIETSSNSADIDKMTNGETSSYWQSDGSACSHWIRLKMKPDVVLRH 300
PEMDKLKSVAKCYAYIETSSNSADIDKMTNGETSSYWQSDGSACSHWIRLKMKPDVVLRH
Sbjct: 241 PEMDKLKSVAKCYAYIETSSNSADIDKMTNGETSSYWQSDGSACSHWIRLKMKPDVVLRH 300
Query: 301 LSIAVAATDQSYMPQQVTVAVGRNASDLQEVRDVHIPSNVTGYVTLLENANVSQLYVQIN 360
LSIAVAATDQSYMPQQVTVAVGRNASDLQEVRDVHIPSNVTGYVTLLENANVSQLYVQIN
Sbjct: 301 LSIAVAATDQSYMPQQVTVAVGRNASDLQEVRDVHIPSNVTGYVTLLENANVSQLYVQIN 360
Query: 361 IKRCLSDGCDTRIHGLRAVGFQRVKKSGVSVSDASAIWYWSLLTSLVTASMETNPAFVQT 420
IKRCLSDGCDTRIHGLRAVGFQRVKKSGVSVSDASAIWYWSLLTSLVTASMETNPAFVQT
Sbjct: 361 IKRCLSDGCDTRIHGLRAVGFQRVKKSGVSVSDASAIWYWSLLTSLVTASMETNPAFVQT 420
Query: 421 VLHNTQKALRHMPPLSLSPGSTDFSTFLSPNVLEEVDSFLIRITSCCSTPEVELTLLAFA 480
VLHNTQKALRHMPPLSLSPGSTDFSTFLSPNVLEEVDSFLIRITSCCSTPEVELTLLAFA
Sbjct: 421 VLHNTQKALRHMPPLSLSPGSTDFSTFLSPNVLEEVDSFLIRITSCCSTPEVELTLLAFA 480
Query: 481 LARGSVAKVMSSLCTITDHLDTQYDASSLILSMASVRQNLLLKYGKPLQLTLQACDVKGK 540
LARGSVAKVMSSLCTITDHLDTQYDASSLILSMASVRQNLLLKYGKPLQLTLQACDVKGK
Sbjct: 481 LARGSVAKVMSSLCTITDHLDTQYDASSLILSMASVRQNLLLKYGKPLQLTLQACDVKGK 540
Query: 541 EDKSGPENLLVEPWTRDGFLTETGKTRASTIFSTGTESAFQVTQIRIMVRRGGIGAQCGL 600
EDKSGPENLLVEPWTRDGFLTETGKTRASTIFSTGTESAFQVTQIRIMVRRGGIGAQCGL
Sbjct: 541 EDKSGPENLLVEPWTRDGFLTETGKTRASTIFSTGTESAFQVTQIRIMVRRGGIGAQCGL 600
Query: 601 VFAYNSSSDKFCAEEHFKRFEKYDKWKLQELRQFVKSRIGCSSDDLGEDDPIGWFELEEE 660
VFAYNSSSDKFCAEEHFKRFEKYDKWKLQELRQFVKSRIGCSSDDLGEDDPIGWFELEEE
Sbjct: 601 VFAYNSSSDKFCAEEHFKRFEKYDKWKLQELRQFVKSRIGCSSDDLGEDDPIGWFELEEE 660
Query: 661 WDEADVKLQQCRVAKYLMVKFLCTRQESAERLGVQGLTISGYLRPARAEAEQSVTCAHCR 720
WDEADVKLQQCRVAKYLMVKFLCTRQESAERLGVQGLTISGYLRPARAEAEQSVTCAHCR
Sbjct: 661 WDEADVKLQQCRVAKYLMVKFLCTRQESAERLGVQGLTISGYLRPARAEAEQSVTCAHCR 720
Query: 721 KDTEESVCGATLLLRTLQFIQQLAHDLVQQKESGLKYKSFLDFAGLDLQIFWNFYSKLKQ 780
KDTEESVCGATLLLRTLQFIQQLAHDLVQQKESGLKYKSFLDFAGLDLQIFWNFYSKLKQ
Sbjct: 721 KDTEESVCGATLLLRTLQFIQQLAHDLVQQKESGLKYKSFLDFAGLDLQIFWNFYSKLKQ 780
Query: 781 NPREECVSAQTLLLQLLQSCFSVLQGDVLAASEEEKAPIQSPKGVEAAKELYTHLCDVVD 840
NPREECVSAQTLLLQLLQSCFSVLQGDVLAASEEEKAPIQSPKGVEAAKELYTHLCDVVD
Sbjct: 781 NPREECVSAQTLLLQLLQSCFSVLQGDVLAASEEEKAPIQSPKGVEAAKELYTHLCDVVD 840
Query: 841 KVDGDSVPMEILKQEVRNTLLNGAAIFFPNRQTRRNHLFTMMNVTEQEHKQSLQLTFRSL 900
KVDGDSVPMEILKQEVRNTLLNGAAIFFPNRQTRRNHLFTMMNVTEQEHKQSLQLTFRSL
Sbjct: 841 KVDGDSVPMEILKQEVRNTLLNGAAIFFPNRQTRRNHLFTMMNVTEQEHKQSLQLTFRSL 900
Query: 901 CTYFSDKDPGGLLLLPEKNDLAKMNISEVLAVMDTLVSVAARECELLMLSGAPGEVGSVL 960
CTYFSDKDPGGLLLLPEKNDLAKMNISEVLAVMDTLVSVAARECELLMLSGAPGEVGSVL
Sbjct: 901 CTYFSDKDPGGLLLLPEKNDLAKMNISEVLAVMDTLVSVAARECELLMLSGAPGEVGSVL 960
Query: 961 FSLFWSVQGSLLSWCYLQLKSTDSGAKDLAVDLIEKYVGQFLASMRAILESLFSQYSGKT 1020
FSLFWSVQGSLLSWCYLQLKSTDSGAKDLAVDLIEKYVGQFLASMRAILESLFSQYSGKT
Sbjct: 961 FSLFWSVQGSLLSWCYLQLKSTDSGAKDLAVDLIEKYVGQFLASMRAILESLFSQYSGKT 1020
Query: 1021 IVERLCNSVFSMAARQLVIFLLDFCTLDIPHCVLLREFSVLTELLKKLCSGPEGGLRKLD 1080
IVERLCNSVFSMAARQLVIFLLDFCTLDIPHCVLLREFSVLTELLKKLCSGPEGGLRKLD
Sbjct: 1021 IVERLCNSVFSMAARQLVIFLLDFCTLDIPHCVLLREFSVLTELLKKLCSGPEGGLRKLD 1080
Query: 1081 VETWQQEQPVVLHTWTKESAHNYENNCHEVSVFVSPGATYFEVEFDDRCETEKRYDYLEF 1140
VETWQQEQPVVLHTWTKESAHNYENNCHEVSVFVSPGATYFEVEFDDRCETEKRYDYLEF
Sbjct: 1081 VETWQQEQPVVLHTWTKESAHNYENNCHEVSVFVSPGATYFEVEFDDRCETEKRYDYLEF 1140
Query: 1141 TDARGRKTRYDTKVGTDKWPKKVTFKAGPRLQFLFHSDSSHNEWGYKFTVTACGLPDVAV 1200
TDARGRKTRYDTKVGTDKWPKKVTFKAGPRLQFLFHSDSSHNEWGYKFTVTACGLPDVAV
Sbjct: 1141 TDARGRKTRYDTKVGTDKWPKKVTFKAGPRLQFLFHSDSSHNEWGYKFTVTACGLPDVAV 1200
Query: 1201 SWGLDLQLLVSRLMGRLASQCMALKSVRQLGSNMVVPQAKMALVLSSPLWKPVFRHQVCP 1260
SWGLDLQLLVSRLMGRLASQCMALKSVRQLGSNMVVPQAKMALVLSSPLWKPVFRHQVCP
Sbjct: 1201 SWGLDLQLLVSRLMGRLASQCMALKSVRQLGSNMVVPQAKMALVLSSPLWKPVFRHQVCP 1260
Query: 1261 ELELEASWPTHPHRNSKEVKNIPDDPCRHFLLDFAQSEPAQNFCGPYSELFKGFIQACRK 1320
ELELEASWPTHPHRNSKEVKNIPDDPCRHFLLDFAQSEPAQNFCGPYSELFKGFIQACRK
Sbjct: 1261 ELELEASWPTHPHRNSKEVKNIPDDPCRHFLLDFAQSEPAQNFCGPYSELFKGFIQACRK 1320
Query: 1321 QAPKTDIVAGSTIDQAVNATFAALVYRTPDLYEKLQKYVNSGGKIALSEEFAQVYSLADG 1380
QAPKTDIVAGSTIDQAVNATFAALVYRTPDLYEKLQKYVNSGGKIALSEEFAQVYSLADG
Sbjct: 1321 QAPKTDIVAGSTIDQAVNATFAALVYRTPDLYEKLQKYVNSGGKIALSEEFAQVYSLADG 1380
Query: 1381 IRIWMLEMKQKSLMSLGNEAEEKHSSEATEVNPESLAKECIEKSLLLLKFLPTGISSKES 1440
IRIWMLEMKQKSLMSLGNEAEEKHSSEATEVNPESLAKECIEKSLLLLKFLPTGISSKES
Sbjct: 1381 IRIWMLEMKQKSLMSLGNEAEEKHSSEATEVNPESLAKECIEKSLLLLKFLPTGISSKES 1440
Query: 1441 CEKLETADETSHLQPLNKRQRTSSVVEEHFQASVSPTEAAPPATGDQSPGLGTQPKLPSS 1500
CEKLETADETSHLQPLNKRQRTSSVVEEHFQASVSPTEAAPPATGDQSPGLGTQPKLPSS
Sbjct: 1441 CEKLETADETSHLQPLNKRQRTSSVVEEHFQASVSPTEAAPPATGDQSPGLGTQPKLPSS 1500
Query: 1501 SGLPAADVSPATAEEPLSPSTPTRRPPFTRGRLRLLSFRSMEEARLVPTVKEKYPVLKDV 1560
SGLPAADVSPATAEEPLSPSTPTRRPPFTRGRLRLLSFRSMEEARLVPTVKEKYPVLKDV
Sbjct: 1501 SGLPAADVSPATAEEPLSPSTPTRRPPFTRGRLRLLSFRSMEEARLVPTVKEKYPVLKDV 1560
Query: 1561 MDFIKDQSLSHRSVVKVLSLRKAQAQSILEVLKITQHCAESLGQPHCFHPPFILFLLELL 1620
MDFIKDQSLSHRSVVKVLSLRKAQAQSILEVLKITQHCAESLGQPHCFHPPFILFLLELL
Sbjct: 1561 MDFIKDQSLSHRSVVKVLSLRKAQAQSILEVLKITQHCAESLGQPHCFHPPFILFLLELL 1620
Query: 1621 TCQKDFTNYFGHLEGCGADLHKEIRDTYYQLVLFLVKAVKGFSSLNDRSLLPALSCVQTA 1680
TCQKDFTNYFGHLEGCGADLHKEIRDTYYQLVLFLVKAVKGFSSLNDRSLLPALSCVQTA
Sbjct: 1621 TCQKDFTNYFGHLEGCGADLHKEIRDTYYQLVLFLVKAVKGFSSLNDRSLLPALSCVQTA 1680
Query: 1681 LLHLLDMGWEPNDLAFFVDIQLPDLLMKMSQENISVHDSVISQWSEEDELADAKQNSEWM 1740
LLHLLDMGWEPNDLAFFVDIQLPDLLMKMSQENISVHDSVISQWSEEDELADAKQNSEWM
Sbjct: 1681 LLHLLDMGWEPNDLAFFVDIQLPDLLMKMSQENISVHDSVISQWSEEDELADAKQNSEWM 1740
Query: 1741 DECQDGMFEAWYEKIAQEDPEKQRKMHMFIARYCDLLNVDISCDGCDEIAPWHRYRCLQC 1800
DECQDGMFEAWYEKIAQEDPEKQRKMHMFIARYCDLLNVDISCDGCDEIAPWHRYRCLQC
Sbjct: 1741 DECQDGMFEAWYEKIAQEDPEKQRKMHMFIARYCDLLNVDISCDGCDEIAPWHRYRCLQC 1800
Query: 1801 SDMDLCKTCFLGGVKPEGHGDDHEMVNMEFTCDHCQGLIIGRRMNCNVCDDFDLCYGCYA 1860
SDMDLCKTCFLGGVKPEGHGDDHEMVNMEFTCDHCQGLIIGRRMNCNVCDDFDLCYGCYA
Sbjct: 1801 SDMDLCKTCFLGGVKPEGHGDDHEMVNMEFTCDHCQGLIIGRRMNCNVCDDFDLCYGCYA 1860
Query: 1861 AKKYSYGHLPTHSITAHPMVTIRISDRQRLIQPYIHNYSWLLFAALALYSAHLASAEDVD 1920
AKKYSYGHLPTHSITAHPMVTIRISDRQRLIQPYIHNYSWLLFAALALYSAHLASAEDVD
Sbjct: 1861 AKKYSYGHLPTHSITAHPMVTIRISDRQRLIQPYIHNYSWLLFAALALYSAHLASAEDVD 1920
Query: 1921 GEKLDPQTRSSATTLRSQCMQLVGDCLMKAHQGKGLKALALLGVLPDGDSSLEDQALPVT 1980
GEKLDPQTRSSATTLRSQCMQLVGDCLMKAHQGKGLKALALLGVLPDGDSSLEDQALPVT
Sbjct: 1921 GEKLDPQTRSSATTLRSQCMQLVGDCLMKAHQGKGLKALALLGVLPDGDSSLEDQALPVT 1980
Query: 1981 VPTGASEEQLEKKAVQGAELSEAGNGKRAVHEEIRPVDFKQRNKADKGVSLSKDPSCQTQ 2040
VPTGASEEQLEKKAVQGAELSEAGNGKRAVHEEIRPVDFKQRNKADKGVSLSKDPSCQTQ
Sbjct: 1981 VPTGASEEQLEKKAVQGAELSEAGNGKRAVHEEIRPVDFKQRNKADKGVSLSKDPSCQTQ 2040
Query: 2041 ISDSPADASPPTGLPDAEDSEVSSQKPIEEKAVTPSPEQVFAECSQKRILGLLAAMLPPL 2100
ISDSPADASPPTGLPDAEDSEVSSQKPIEEKAVTPSPEQVFAECSQKRILGLLAAMLPPL
Sbjct: 2041 ISDSPADASPPTGLPDAEDSEVSSQKPIEEKAVTPSPEQVFAECSQKRILGLLAAMLPPL 2100
Query: 2101 KSGPTVPLIDLEHVLPLMFQVVISNAGHLNETYHLTLGLLGQLIIRLLPAEVDAAVIKVL 2160
KSGPTVPLIDLEHVLPLMFQVVISNAGHLNETYHLTLGLLGQLIIRLLPAEVDAAVIKVL
Sbjct: 2101 KSGPTVPLIDLEHVLPLMFQVVISNAGHLNETYHLTLGLLGQLIIRLLPAEVDAAVIKVL 2160
Query: 2161 SAKHNLFAAGDSSIVPDGWKTTHLLFSLGAVCLDSRVGLDWACSMAEILRSLNSAPLWRD 2220
SAKHNLFAAGDSSIVPDGWKTTHLLFSLGAVCLDSRVGLDWACSMAEILRSLNSAPLWRD
Sbjct: 2161 SAKHNLFAAGDSSIVPDGWKTTHLLFSLGAVCLDSRVGLDWACSMAEILRSLNSAPLWRD 2220
Query: 2221 VIATFTDHCIKQLPFQLKHTNIFTLLVLVGFPQVLCVGTRCVYMDNANEPHNVIILKHFT 2280
VIATFTDHCIKQLPFQLKHTNIFTLLVLVGFPQVLCVGTRCVYMDNANEPHNVIILKHFT
Sbjct: 2221 VIATFTDHCIKQLPFQLKHTNIFTLLVLVGFPQVLCVGTRCVYMDNANEPHNVIILKHFT 2280
Query: 2281 EKNRAVIVDVKTRKRKTVKDYQLVQKGGGQECGDSRAQLSQYSQHFAFIASHLLQSSMDS 2340
EKNRAVIVDVKTRKRKTVKDYQLVQKGGGQECGDSRAQLSQYSQHFAFIASHLLQSSMDS
Sbjct: 2281 EKNRAVIVDVKTRKRKTVKDYQLVQKGGGQECGDSRAQLSQYSQHFAFIASHLLQSSMDS 2340
Query: 2341 HCPEAVEATWVLSLALKGLYKTLKAHGFEEIRATFLQTDLLKLLVKKCSKGTGFSKTWLL 2400
HCPEAVEATWVLSLALKGLYKTLKAHGFEEIRATFLQTDLLKLLVKKCSKGTGFSKTWLL
Sbjct: 2341 HCPEAVEATWVLSLALKGLYKTLKAHGFEEIRATFLQTDLLKLLVKKCSKGTGFSKTWLL 2400
Query: 2401 RDLEILSIMLYSSKKEINALAEHGDLELDERGDREEEVERPVSSPGDPEQKKLDPLEGLD 2460
RDLEILSIMLYSSKKEINALAEHGDLELDERGDREEEVERPVSSPGDPEQKKLDPLEGLD
Sbjct: 2401 RDLEILSIMLYSSKKEINALAEHGDLELDERGDREEEVERPVSSPGDPEQKKLDPLEGLD 2460
Query: 2461 EPTRICFLMAHDALNAPLHILRAIYELQMKKTDYFFLEVQKRFDGDELTTDERIRSLAQR 2520
EPTRICFLMAHDALNAPLHILRAIYELQMKKTDYFFLEVQKRFDGDELTTDERIRSLAQR
Sbjct: 2461 EPTRICFLMAHDALNAPLHILRAIYELQMKKTDYFFLEVQKRFDGDELTTDERIRSLAQR 2520
Query: 2521 WQPSKSLRLEEQSAKAVDTDMIILPCLSRPARCDQATAESNPVTQKLISSTESELQQSYA 2580
WQPSKSLRLEEQSAKAVDTDMIILPCLSRPARCDQATAESNPVTQKLISSTESELQQSYA
Sbjct: 2521 WQPSKSLRLEEQSAKAVDTDMIILPCLSRPARCDQATAESNPVTQKLISSTESELQQSYA 2580
Query: 2581 KQRRSKSAALLHKELNCKSKRAVRDYLFRVNEATAVLYARHVLASLLAEWPSHVPVSEDI 2640
KQRRSKSAALLHKELNCKSKRAVRDYLFRVNEATAVLYARHVLASLLAEWPSHVPVSEDI
Sbjct: 2581 KQRRSKSAALLHKELNCKSKRAVRDYLFRVNEATAVLYARHVLASLLAEWPSHVPVSEDI 2640
Query: 2641 LELSGPAHMTYILDMFMQLEEKHEWEKILQKVLQGCREDMLGTMALAACQFMEEPGMEVQ 2700
LELSGPAHMTYILDMFMQLEEKHEWEKILQKVLQGCREDMLGTMALAACQFMEEPGMEVQ
Sbjct: 2641 LELSGPAHMTYILDMFMQLEEKHEWEKILQKVLQGCREDMLGTMALAACQFMEEPGMEVQ 2700
Query: 2701 VRESKHPYNNNTNFEDKVHIPGAIYLSIKFDSQCNTEEGCDELAMSSSSDFQQDRHSFSG 2760
VRESKHPYNNNTNFEDKVHIPGAIYLSIKFDSQCNTEEGCDELAMSSSSDFQQDRHSFSG
Sbjct: 2701 VRESKHPYNNNTNFEDKVHIPGAIYLSIKFDSQCNTEEGCDELAMSSSSDFQQDRHSFSG 2760
Query: 2761 SQQKWKDFELPGDTLYYRFTSDMSNTEWGYRFTVTAGHLGRFQTGFEILKQMLSEERVVP 2820
SQQKWKDFELPGDTLYYRFTSDMSNTEWGYRFTVTAGHLGRFQTGFEILKQMLSEERVVP
Sbjct: 2761 SQQKWKDFELPGDTLYYRFTSDMSNTEWGYRFTVTAGHLGRFQTGFEILKQMLSEERVVP 2820
Query: 2821 HLPLAKIWEWLVGVACRQTGHQRLKAIHLLLRIVRCCGHSDLCDLALLKPLWQLFTHMEY 2880
HLPLAKIWEWLVGVACRQTGHQRLKAIHLLLRIVRCCGHSDLCDLALLKPLWQLFTHMEY
Sbjct: 2821 HLPLAKIWEWLVGVACRQTGHQRLKAIHLLLRIVRCCGHSDLCDLALLKPLWQLFTHMEY 2880
Query: 2881 GLFEDVTQPGILLPLHRALTELFFVTENRAQELGVLQDYLLALTTDDHLLRCAAQALQNI 2940
GLFEDVTQPGILLPLHRALTELFFVTENRAQELGVLQDYLLALTTDDHLLRCAAQALQNI
Sbjct: 2881 GLFEDVTQPGILLPLHRALTELFFVTENRAQELGVLQDYLLALTTDDHLLRCAAQALQNI 2940
Query: 2941 AAISLAINYPNKATRLWNVEC 2961
AAISLAINYPNKATRLWNVEC
Sbjct: 2941 AAISLAINYPNKATRLWNVEC 2961
>gi|41872646 cullin 7 [Homo sapiens]
Length = 1698
Score = 97.8 bits (242), Expect = 1e-19
Identities = 54/131 (41%), Positives = 78/131 (59%), Gaps = 2/131 (1%)
Query: 251 KCYAYIETSSNSADIDKMTNGETSSYWQSDGSACSHWIRLKMKPDVVLRHLSIAVAATDQ 310
KC+ +E SSN K+T+ +YW+S+GSA SH+I L M+ +++R L++ VA+ D
Sbjct: 839 KCWEKVEVSSNPHRASKLTDHNPKTYWESNGSAGSHYITLHMRRGILIRQLTLLVASEDS 898
Query: 311 SYMPQQVTVAVGRNASDLQ-EVRDVHIPSNVTGYVTLLENANVSQLYVQINIKRCLSDGC 369
SYMP +V V G + S L E+ V++ + + V LLEN +QI IKRC G
Sbjct: 899 SYMPARVVVCGGDSTSSLHTELNSVNVMPSAS-RVILLENLTRFWPIIQIRIKRCQQGGI 957
Query: 370 DTRIHGLRAVG 380
DTRI GL +G
Sbjct: 958 DTRIRGLEILG 968
>gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo
sapiens]
Length = 2517
Score = 92.8 bits (229), Expect = 4e-18
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 2/131 (1%)
Query: 251 KCYAYIETSSNSADIDKMTNGETSSYWQSDGSACSHWIRLKMKPDVVLRHLSIAVAATDQ 310
KC+ +E SSN K+T+ +YW+S+GS SH+I L M V++R L++ VA+ D
Sbjct: 1168 KCWEKVEVSSNPHRASKLTDHNPKTYWESNGSTGSHYITLHMHRGVLVRQLTLLVASEDS 1227
Query: 311 SYMPQQVTVAVGRNASDL-QEVRDVHIPSNVTGYVTLLENANVSQLYVQINIKRCLSDGC 369
SYMP +V V G + S + E+ V++ + + V LLEN N +QI IKRC G
Sbjct: 1228 SYMPARVVVFGGDSTSCIGTELNTVNVMPSAS-RVILLENLNRFWPIIQIRIKRCQQGGI 1286
Query: 370 DTRIHGLRAVG 380
DTR+ G+ +G
Sbjct: 1287 DTRVRGVEVLG 1297
>gi|157738609 HECT domain containing 3 [Homo sapiens]
Length = 861
Score = 91.7 bits (226), Expect = 1e-17
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 242 EMDKLKSVAKCYAYIETSSNSAD--IDKMTNGETSSYWQSDGSACSHWIRLKMKPDVVLR 299
E + L SV + I+ SS + + + +T+ +YW+SDGS C HW+RL MK +++
Sbjct: 233 EDENLGSVKQYVESIDVSSYTEEFNVSCLTDSNADTYWESDGSQCQHWVRLTMKKGTIVK 292
Query: 300 HLSIAVAATDQSYMPQQVTVAVGRNASDLQEVRDVHIPSNVTGYVTLLENANVSQLYVQI 359
L + V TD ++MP++V V G +L+++ DV I + G V +LE+ V ++I
Sbjct: 293 KLLLTVDTTDDNFMPKRV-VVYGGEGDNLKKLSDVSIDETLIGDVCVLEDMTVHLPIIEI 351
Query: 360 NIKRCLSDGCDTRIHGLR 377
I C DG D R+ G++
Sbjct: 352 RIVECRDDGIDVRLRGVK 369
>gi|126032348 hect domain and RLD 2 [Homo sapiens]
Length = 4834
Score = 87.0 bits (214), Expect = 2e-16
Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Query: 246 LKSVAKCYAYIETSSNSADIDKMTNGETSSYWQSDGSACSHWIRLKMKPDVVLRHLSIAV 305
L S ++ + SS+ ++ +G + WQS GS HWIRL++ PDV++ L + V
Sbjct: 2779 LDSWSRMVKSLNVSSSVNQASRLIDG-SEPCWQSSGSQGKHWIRLEIFPDVLVHRLKMIV 2837
Query: 306 AATDQSYMPQQVTVAVGRNASDLQEVRDVHI-PSNVTGYVTLLENANVSQLYVQINIKRC 364
D SYMP V V+ G + ++L E++ ++I PS+ T V LL + Y++I IK+C
Sbjct: 2838 DPADSSYMPSLVVVSGGNSLNNLIELKTININPSDTT--VPLLNDCTEYHRYIEIAIKQC 2895
Query: 365 LSDGCDTRIHGLRAVGFQRVKKSGVS 390
S G D +IHGL +G R ++ ++
Sbjct: 2896 RSSGIDCKIHGLILLGRIRAEEEDLA 2921
Score = 67.0 bits (162), Expect = 3e-10
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 2701 VRESKHPYNNNTNFEDKVHIPGAIYLSIKFDSQCNTEEGCDELAMSSSSDFQQDRHSFSG 2760
V ES HPY ++T+ V IPGA L ++FD QC+TE D L + +R
Sbjct: 3613 VVESSHPYTDDTSTSGTVKIPGAEGLRVEFDRQCSTERRHDPLTVMDG----VNRIVSVR 3668
Query: 2761 SQQKWKDF----ELPGDTLYYRFTSDMSNTEWGYRFTV 2794
S ++W D+ +PGD L ++F SD S WG+RFTV
Sbjct: 3669 SGREWSDWSSELRIPGDELKWKFISDGSVNGWGWRFTV 3706
Score = 57.4 bits (137), Expect = 2e-07
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 1088 QPVVLHTWTKESAHNYENNCHEVSVFVSPGATYFEVEFDDRCETEKRYDYLEFTDARGRK 1147
QPVV+ ES+H Y ++ PGA VEFD +C TE+R+D L D R
Sbjct: 3610 QPVVV-----ESSHPYTDDTSTSGTVKIPGAEGLRVEFDRQCSTERRHDPLTVMDGVNRI 3664
Query: 1148 TRYDTKVGTDKWPKKVTFKAGPRLQFLFHSDSSHNEWGYKFTV 1190
+ W ++ G L++ F SD S N WG++FTV
Sbjct: 3665 VSVRSGREWSDWSSELRI-PGDELKWKFISDGSVNGWGWRFTV 3706
Score = 43.1 bits (100), Expect = 0.004
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1831 TCDHCQGLII-GRRMNCNVCDDFDLCYGCYAAKKYSYGH 1868
TCD CQ I G R C CDDFD C C+ KK++ H
Sbjct: 2707 TCDGCQMFPINGSRFKCRNCDDFDFCETCFKTKKHNTRH 2745
Score = 37.0 bits (84), Expect = 0.29
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Query: 1781 ISCDGCDEIAPWH--RYRCLQCSDMDLCKTCFLGGVKPEGHGDDH 1823
++CDGC ++ P + R++C C D D C+TCF K + H H
Sbjct: 2706 VTCDGC-QMFPINGSRFKCRNCDDFDFCETCF----KTKKHNTRH 2745
>gi|150170706 anaphase promoting complex subunit 10 [Homo sapiens]
Length = 185
Score = 50.8 bits (120), Expect = 2e-05
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 7/118 (5%)
Query: 265 IDKMTNGETSSYWQSDGSACSHWIRLKMKPDVVLRHLSI-AVAATDQSYMPQQVTVAVGR 323
+D++ + +YWQSDGS H + ++ + ++ L I A +D+SY P +++V VG
Sbjct: 42 VDQLRDDNLETYWQSDGSQ-PHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGN 100
Query: 324 NASDLQEVRDVHI--PSNVTGYVTLLENAN--VSQLYVQINIKRCLSDGCDTRIHGLR 377
N +LQE+R + + PS +V L +N +QI + +G DT + ++
Sbjct: 101 NFHNLQEIRQLELVEPSGWI-HVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIK 157
>gi|157885806 chromosome 12 open reading frame 51 [Homo sapiens]
Length = 3996
Score = 43.9 bits (102), Expect = 0.002
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 2703 ESKHPYNNNTNFEDKVHIPGAIYLSIKFDSQCNTEEGCDELAM 2745
E+ HP +N F++ VHIPGA L ++FDS+C+++ D+L +
Sbjct: 638 ETVHPVRDNYKFKETVHIPGARCLYLRFDSRCSSQYDYDKLVI 680
>gi|214830451 sequestosome 1 isoform 2 [Homo sapiens]
Length = 356
Score = 43.1 bits (100), Expect = 0.004
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 1825 MVNMEFTCDHCQGLIIGRRMNCNVCDDFDLCYGC 1858
MV+ CD C G ++G R C+VC D+DLC C
Sbjct: 37 MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVC 70
Score = 37.4 bits (85), Expect = 0.22
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 1775 DLLNVDISCDGCDEIAPWHRYRCLQCSDMDLCKTC 1809
++++ ++ CDGC+ RY+C C D DLC C
Sbjct: 36 NMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVC 70
>gi|214830438 sequestosome 1 isoform 2 [Homo sapiens]
Length = 356
Score = 43.1 bits (100), Expect = 0.004
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 1825 MVNMEFTCDHCQGLIIGRRMNCNVCDDFDLCYGC 1858
MV+ CD C G ++G R C+VC D+DLC C
Sbjct: 37 MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVC 70
Score = 37.4 bits (85), Expect = 0.22
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 1775 DLLNVDISCDGCDEIAPWHRYRCLQCSDMDLCKTC 1809
++++ ++ CDGC+ RY+C C D DLC C
Sbjct: 36 NMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVC 70
>gi|4505571 sequestosome 1 isoform 1 [Homo sapiens]
Length = 440
Score = 43.1 bits (100), Expect = 0.004
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 1825 MVNMEFTCDHCQGLIIGRRMNCNVCDDFDLCYGC 1858
MV+ CD C G ++G R C+VC D+DLC C
Sbjct: 121 MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVC 154
Score = 37.4 bits (85), Expect = 0.22
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 1775 DLLNVDISCDGCDEIAPWHRYRCLQCSDMDLCKTC 1809
++++ ++ CDGC+ RY+C C D DLC C
Sbjct: 120 NMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVC 154
>gi|157364926 dystrotelin [Homo sapiens]
Length = 578
Score = 42.7 bits (99), Expect = 0.005
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Query: 1794 RYRCLQCSDMDLCKTCFLGGVKPEGHGDDHEMVNMEFTCDHC 1835
RYRCL+C + D+C+ CFL G+ + H H ++ +HC
Sbjct: 240 RYRCLKCLNFDICQMCFLSGLHSKSHQKSHPVI------EHC 275
Score = 34.3 bits (77), Expect = 1.9
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1824 EMVNMEFTCDHCQGL-IIGRRMNCNVCDDFDLCYGCYAAKKYSYGHLPTHSITAH 1877
E V C C+ I G R C C +FD+C C+ + +S H +H + H
Sbjct: 220 ERVTHPARCTLCRTFPITGLRYRCLKCLNFDICQMCFLSGLHSKSHQKSHPVIEH 274
>gi|46852178 potassium channel modulatory factor 1 [Homo sapiens]
Length = 381
Score = 42.0 bits (97), Expect = 0.009
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 1831 TCDHC-QGLIIGRRMNCNVCDDFDLCYGCYAAKKYSYGHLPTHSITAHPMVTI 1882
+CD C +G GRR C +C D+DLC CY + G T T HPM I
Sbjct: 8 SCDACLKGNFRGRRYKCLICYDYDLCASCYES-----GATTTRHTTDHPMQCI 55
Score = 41.2 bits (95), Expect = 0.015
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 1781 ISCDGCDE-IAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHEM 1825
+SCD C + RY+CL C D DLC +C+ G H DH M
Sbjct: 7 VSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM 52
>gi|21264330 mindbomb homolog 2 [Homo sapiens]
Length = 1013
Score = 40.0 bits (92), Expect = 0.034
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 1832 CDHCQGL-IIGRRMNCNVCDDFDLCYGCYAAKKYSYGHLPTHSITAHPMVTIRISDRQRL 1890
CD C+ + G R C VC D+DLC CY K+ H TAH + +S RQ L
Sbjct: 149 CDCCKKHGLRGMRWKCRVCLDYDLCTQCYMHNKHELAHAFDRYETAHSR-PVTLSPRQGL 207
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 39.7 bits (91), Expect = 0.045
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 1830 FTCDHCQGLIIGRRMNCNVCDDFDLCYGCYAAKKYSY 1866
+TC+ C+ + R +C VC+D+DLC CY K +++
Sbjct: 1667 YTCNECKHHV-ETRWHCTVCEDYDLCINCYNTKSHAH 1702
Score = 32.0 bits (71), Expect = 9.3
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 10/113 (8%)
Query: 1417 AKECIEKSLLLLKFLPTGISSKESCEKLETADETSHLQPLNKRQRTSSVVEEHFQASVSP 1476
AK C E + P ++ K + + Q + +R T + Q+ SP
Sbjct: 1792 AKHCQENKCPV----PFCLNIKHKLRQQQIQHRLQQAQLMRRRMATMNTRNVPQQSLPSP 1847
Query: 1477 TEAAPPATGDQSPGLGTQPKLPSSSGLPAADVSPATAEEPLSPSTPTRRPPFT 1529
T +APP T Q P P+ P+ +SPA PS +PP T
Sbjct: 1848 T-SAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAG-----FPSVARTQPPTT 1894
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 39.7 bits (91), Expect = 0.045
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 1830 FTCDHCQGLIIGRRMNCNVCDDFDLCYGCYAAKKYSY 1866
+TC+ C+ + R +C VC+D+DLC CY K +++
Sbjct: 1705 YTCNECKHHV-ETRWHCTVCEDYDLCINCYNTKSHAH 1740
Score = 32.0 bits (71), Expect = 9.3
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 10/113 (8%)
Query: 1417 AKECIEKSLLLLKFLPTGISSKESCEKLETADETSHLQPLNKRQRTSSVVEEHFQASVSP 1476
AK C E + P ++ K + + Q + +R T + Q+ SP
Sbjct: 1830 AKHCQENKCPV----PFCLNIKHKLRQQQIQHRLQQAQLMRRRMATMNTRNVPQQSLPSP 1885
Query: 1477 TEAAPPATGDQSPGLGTQPKLPSSSGLPAADVSPATAEEPLSPSTPTRRPPFT 1529
T +APP T Q P P+ P+ +SPA PS +PP T
Sbjct: 1886 T-SAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAG-----FPSVARTQPPTT 1932
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 39.3 bits (90), Expect = 0.058
Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 10/154 (6%)
Query: 1381 IRIWMLEMKQKSLMSLGNEAEEKHSSEATEVNPE-----SLAKECIEKSLLLLKFLPTGI 1435
I +W +QK+ S N+AE K + + N ++ +C + +++ +
Sbjct: 2225 IVVWFQNARQKARKSYENQAETKDNEKRELTNERYIRTSNMQYQCKKCNVVFPRIFDLIT 2284
Query: 1436 SSKESCEKLETADETSHLQPLNKRQRTSSVVEEHFQASVSPTEAAPPATGDQSPGLGTQ- 1494
K+ C K E D Q + T VV +H S A A S G GT
Sbjct: 2285 HQKKQCYKDEDDDAQDESQTEDSMDATDQVVYKHCTVSGQTDAAKNAAAPAASSGSGTST 2344
Query: 1495 PKLPSSSGLPAADVS----PATAEEPLSPSTPTR 1524
P +PS P PA + PS P++
Sbjct: 2345 PLIPSPKPEPEKTSPKPEYPAEKPKQSDPSPPSQ 2378
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 38.9 bits (89), Expect = 0.076
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 11/109 (10%)
Query: 1430 FLPTGISSKESCEKLETADETSHLQPLNK---RQRTSSVVEEHFQASVSPTEAAPPATGD 1486
FLP ++ S E + T+ + L P+N + T++ P+ +APP T
Sbjct: 131 FLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTA 190
Query: 1487 QSPGLGTQPKLPSSSGLP-----AADVSPATAEEPLSPSTP---TRRPP 1527
P + P SS P A PAT P S S P T PP
Sbjct: 191 APPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPP 239
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 38.9 bits (89), Expect = 0.076
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 11/109 (10%)
Query: 1430 FLPTGISSKESCEKLETADETSHLQPLNK---RQRTSSVVEEHFQASVSPTEAAPPATGD 1486
FLP ++ S E + T+ + L P+N + T++ P+ +APP T
Sbjct: 131 FLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTA 190
Query: 1487 QSPGLGTQPKLPSSSGLP-----AADVSPATAEEPLSPSTP---TRRPP 1527
P + P SS P A PAT P S S P T PP
Sbjct: 191 APPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPP 239
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 38.9 bits (89), Expect = 0.076
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 11/109 (10%)
Query: 1430 FLPTGISSKESCEKLETADETSHLQPLNK---RQRTSSVVEEHFQASVSPTEAAPPATGD 1486
FLP ++ S E + T+ + L P+N + T++ P+ +APP T
Sbjct: 131 FLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTA 190
Query: 1487 QSPGLGTQPKLPSSSGLP-----AADVSPATAEEPLSPSTP---TRRPP 1527
P + P SS P A PAT P S S P T PP
Sbjct: 191 APPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPP 239
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase 4
[Homo sapiens]
Length = 1039
Score = 38.9 bits (89), Expect = 0.076
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Query: 1473 SVSPTEAAPPATGDQSPGLGTQPKLPSSSGLPAADVSPATAEEPLSPSTP 1522
S+ PTEAAPP +G QSP P++ P A ++P T P TP
Sbjct: 446 SLEPTEAAPPRSGPQSPA-------PAAPAQPGATLAPPTPPRPRDGGTP 488
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 38.5 bits (88), Expect = 0.100
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 1435 ISSKESCEKLETADETSHLQP---LNKRQRTSSVVEEHFQASVS---PTEAAPPATGDQS 1488
+S + + E+ HL+P L R T+ + E ASV+ PT A + GD
Sbjct: 1092 LSERTAQEQRTPVAPQYHLKPSAFLKSRNSTNEMESESQPASVTSSLPTPAKSSSQGDHG 1151
Query: 1489 PGLGTQPKLPSSSGLPAA---DVSPATAEEPLSPSTPTRRPP 1527
+ S G P+A + P+ + PL S+P+R+PP
Sbjct: 1152 SAAERGGPVSRSPGAPSAGEAEARPSPSTTPLPDSSPSRKPP 1193
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 38.5 bits (88), Expect = 0.100
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 1830 FTCDHCQGLIIGRRMNCNVCDDFDLCYGCYAAKKYSY 1866
+TC+ C+ + R +C VC+D+DLC CY K + +
Sbjct: 1668 YTCNECKHHV-ETRWHCTVCEDYDLCITCYNTKNHDH 1703
>gi|122056617 LIM domain binding 3 isoform 3 [Homo sapiens]
Length = 330
Score = 38.5 bits (88), Expect = 0.100
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 1448 DETSHLQPLNKRQRTSSVVEEHFQASVSPTEAAPPATGDQSP----GLGTQPKLPSSSGL 1503
D +HL+ NK + S + Q S P + A Q+P P L ++ L
Sbjct: 58 DTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDTNGSL 117
Query: 1504 PAADVSPATAEEPLSPSTPTRRPPFTRGRLRLLSFRSMEEA 1544
A SP P +P TP RP F+ R +F S+ EA
Sbjct: 118 VAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEA 158
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 38.5 bits (88), Expect = 0.100
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 1448 DETSHLQPLNKRQRTSSVVEEHFQASVSPTEAAPPATGDQSP----GLGTQPKLPSSSGL 1503
D +HL+ NK + S + Q S P + A Q+P P L ++ L
Sbjct: 58 DTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDTNGSL 117
Query: 1504 PAADVSPATAEEPLSPSTPTRRPPFTRGRLRLLSFRSMEEA 1544
A SP P +P TP RP F+ R +F S+ EA
Sbjct: 118 VAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEA 158
>gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo
sapiens]
Length = 539
Score = 38.1 bits (87), Expect = 0.13
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 23/161 (14%)
Query: 1385 MLEMKQKSLMSLGNEAEEKHSSEATEVNPESLAKECIEKSLLLLKFLPTGISSKESCEKL 1444
+L++ + ++ G EA+ + + EV + +E + ++ P + S +KL
Sbjct: 267 LLDISELDMVGAGREAKRRRKTLDAEVVEKPAKEETVVENAT-----PDYAAGLVSTQKL 321
Query: 1445 ETADETSHLQPLNKRQRTSSVVEEHFQASVSPTEAAPPATGDQSPGLGTQ------PKLP 1498
+ + L + T SVV +S P+ PPA + + P LP
Sbjct: 322 GSLNNEPALPSTSYLPSTPSVVPA---SSYIPSSETPPAPSSREASRPPEEPSAPSPTLP 378
Query: 1499 S---------SSGLPAADVSPATAEEPLSPSTPTRRPPFTR 1530
+ +SGL A +PA PL+P+TP P T+
Sbjct: 379 AQFKQRAPMYNSGLSPATPTPAAPTSPLTPTTPPAVAPTTQ 419
>gi|14110378 neighbor of BRCA1 gene 1 [Homo sapiens]
Length = 966
Score = 37.7 bits (86), Expect = 0.17
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 1832 CDHCQGLIIGRRMNCNVCDDFDLCYGCYAAKKYSYGHLPTH 1872
C++CQ I+G R C++C +++C C A YGH H
Sbjct: 217 CNNCQRRIVGVRYQCSLCPSYNICEDCEAG---PYGHDTNH 254
Score = 33.9 bits (76), Expect = 2.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 1781 ISCDGCDEIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHEMVNM 1828
I+C+ C RY+C C ++C+ C G P GH +H ++ +
Sbjct: 215 IACNNCQRRIVGVRYQCSLCPSYNICEDCEAG---PYGHDTNHVLLKL 259
>gi|14110375 neighbor of BRCA1 gene 1 [Homo sapiens]
Length = 966
Score = 37.7 bits (86), Expect = 0.17
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 1832 CDHCQGLIIGRRMNCNVCDDFDLCYGCYAAKKYSYGHLPTH 1872
C++CQ I+G R C++C +++C C A YGH H
Sbjct: 217 CNNCQRRIVGVRYQCSLCPSYNICEDCEAG---PYGHDTNH 254
Score = 33.9 bits (76), Expect = 2.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 1781 ISCDGCDEIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHEMVNM 1828
I+C+ C RY+C C ++C+ C G P GH +H ++ +
Sbjct: 215 IACNNCQRRIVGVRYQCSLCPSYNICEDCEAG---PYGHDTNHVLLKL 259
>gi|14110381 neighbor of BRCA1 gene 1 [Homo sapiens]
Length = 966
Score = 37.7 bits (86), Expect = 0.17
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 1832 CDHCQGLIIGRRMNCNVCDDFDLCYGCYAAKKYSYGHLPTH 1872
C++CQ I+G R C++C +++C C A YGH H
Sbjct: 217 CNNCQRRIVGVRYQCSLCPSYNICEDCEAG---PYGHDTNH 254
Score = 33.9 bits (76), Expect = 2.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 1781 ISCDGCDEIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHEMVNM 1828
I+C+ C RY+C C ++C+ C G P GH +H ++ +
Sbjct: 215 IACNNCQRRIVGVRYQCSLCPSYNICEDCEAG---PYGHDTNHVLLKL 259
>gi|42717999 dystrobrevin alpha isoform 2 [Homo sapiens]
Length = 686
Score = 37.7 bits (86), Expect = 0.17
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 1781 ISCDGC-DEIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHEM 1825
+ C C E RYRC QC + LC+ CF G H + H+M
Sbjct: 241 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQM 286
>gi|42718005 dystrobrevin alpha isoform 1 [Homo sapiens]
Length = 743
Score = 37.7 bits (86), Expect = 0.17
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 1781 ISCDGC-DEIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHEM 1825
+ C C E RYRC QC + LC+ CF G H + H+M
Sbjct: 241 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQM 286
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,385,128
Number of Sequences: 37866
Number of extensions: 5234200
Number of successful extensions: 19804
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 19231
Number of HSP's gapped (non-prelim): 696
length of query: 2961
length of database: 18,247,518
effective HSP length: 120
effective length of query: 2841
effective length of database: 13,703,598
effective search space: 38931921918
effective search space used: 38931921918
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.