Guide to the Human Genome
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Search of human proteins with 73611920

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|73611920 phosphatidic acid phosphatase type 2 domain
containing 1A [Homo sapiens]
         (271 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|73611920 phosphatidic acid phosphatase type 2 domain containi...   558   e-159
gi|156523237 phosphatidic acid phosphatase type 2 domain contain...   338   2e-93
gi|156523235 phosphatidic acid phosphatase type 2 domain contain...   289   2e-78
gi|156523239 phosphatidic acid phosphatase type 2 domain contain...   194   5e-50
gi|4505977 phosphatidic acid phosphatase type 2C isoform 1 [Homo...    66   3e-11
gi|29171745 phosphatidic acid phosphatase type 2C isoform 2 [Hom...    66   3e-11
gi|29171747 phosphatidic acid phosphatase type 2C isoform 3 [Hom...    66   3e-11
gi|29171736 phosphatidic acid phosphatase type 2A isoform 1 [Hom...    64   1e-10
gi|82659094 phosphatidic acid phosphatase type 2d isoform 1 [Hom...    63   3e-10
gi|61102719 phosphatidic acid phosphatase type 2d isoform 2 [Hom...    63   3e-10
gi|29171738 phosphatidic acid phosphatase type 2A isoform 2 [Hom...    62   7e-10
gi|29171740 phosphatidic acid phosphatase type 2B [Homo sapiens]       57   1e-08
gi|29171742 phosphatidic acid phosphatase type 2B [Homo sapiens]       57   1e-08
gi|46877066 plasticity related gene 3 [Homo sapiens]                   53   3e-07
gi|46877064 plasticity related gene 3 [Homo sapiens]                   53   3e-07
gi|12232395 lipid phosphate phosphatase-related protein type 2 [...    51   1e-06
gi|33636722 plasticity related gene 1 [Homo sapiens]                   45   9e-05
gi|30794376 dolichyl pyrophosphate phosphatase 1 isoform a [Homo...    33   0.26 
gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens]      29   5.0  
gi|72384339 CUB domain containing protein 2 [Homo sapiens]             29   5.0  
gi|209529678 sarcospan isoform 2 [Homo sapiens]                        28   6.5  
gi|16933561 sarcospan isoform 1 [Homo sapiens]                         28   6.5  
gi|239047271 autophagy related 2A [Homo sapiens]                       28   8.5  

>gi|73611920 phosphatidic acid phosphatase type 2 domain containing
           1A [Homo sapiens]
          Length = 271

 Score =  558 bits (1439), Expect = e-159
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MRELAIEIGVRALLFGVFVFTEFLDPFQRVIQPEEIWLYKNPLVQSDNIPTRLMFAISFL 60
           MRELAIEIGVRALLFGVFVFTEFLDPFQRVIQPEEIWLYKNPLVQSDNIPTRLMFAISFL
Sbjct: 1   MRELAIEIGVRALLFGVFVFTEFLDPFQRVIQPEEIWLYKNPLVQSDNIPTRLMFAISFL 60

Query: 61  TPLAVICVVKIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDG 120
           TPLAVICVVKIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDG
Sbjct: 61  TPLAVICVVKIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDG 120

Query: 121 VMNSEMHCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLC 180
           VMNSEMHCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLC
Sbjct: 121 VMNSEMHCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLC 180

Query: 181 AAILPLYCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANTACHKPYVS 240
           AAILPLYCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANTACHKPYVS
Sbjct: 181 AAILPLYCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANTACHKPYVS 240

Query: 241 LRVPASLKKEERPTADSAPSLPLEGITEGPV 271
           LRVPASLKKEERPTADSAPSLPLEGITEGPV
Sbjct: 241 LRVPASLKKEERPTADSAPSLPLEGITEGPV 271


>gi|156523237 phosphatidic acid phosphatase type 2 domain containing
           1B isoform 1 [Homo sapiens]
          Length = 264

 Score =  338 bits (868), Expect = 2e-93
 Identities = 154/243 (63%), Positives = 193/243 (79%)

Query: 7   EIGVRALLFGVFVFTEFLDPFQRVIQPEEIWLYKNPLVQSDNIPTRLMFAISFLTPLAVI 66
           E+GVR  LF  F+ TE L PFQR+IQPEE+WLY+NP V+++  PT+ MF I+FL+PL++I
Sbjct: 13  EVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPMFVIAFLSPLSLI 72

Query: 67  CVVKIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGVMNSEM 126
            + K +++ D  + ++A LA SLALALNGV TNTIKLIVGRPRPDFFYRCFPDG+ +S++
Sbjct: 73  FLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHSDL 132

Query: 127 HCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILPL 186
            CTGD D+V+EGRKSFPS HSSFAF+GL F +FYLAGKLHCFT  GRGKSWR CA + PL
Sbjct: 133 MCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPL 192

Query: 187 YCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANTACHKPYVSLRVPAS 246
             A +IALSR CDYKHHWQD  VG +IG+ FAY+CYRQ+YPPL +  CHKP+    V ++
Sbjct: 193 LFAAVIALSRTCDYKHHWQDVLVGSMIGMTFAYVCYRQYYPPLTDAECHKPFQDKLVLST 252

Query: 247 LKK 249
            +K
Sbjct: 253 AQK 255


>gi|156523235 phosphatidic acid phosphatase type 2 domain containing
           1B isoform 2 [Homo sapiens]
          Length = 216

 Score =  289 bits (739), Expect = 2e-78
 Identities = 133/202 (65%), Positives = 163/202 (80%)

Query: 7   EIGVRALLFGVFVFTEFLDPFQRVIQPEEIWLYKNPLVQSDNIPTRLMFAISFLTPLAVI 66
           E+GVR  LF  F+ TE L PFQR+IQPEE+WLY+NP V+++  PT+ MF I+FL+PL++I
Sbjct: 13  EVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPMFVIAFLSPLSLI 72

Query: 67  CVVKIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGVMNSEM 126
            + K +++ D  + ++A LA SLALALNGV TNTIKLIVGRPRPDFFYRCFPDG+ +S++
Sbjct: 73  FLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHSDL 132

Query: 127 HCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILPL 186
            CTGD D+V+EGRKSFPS HSSFAF+GL F +FYLAGKLHCFT  GRGKSWR CA + PL
Sbjct: 133 MCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPL 192

Query: 187 YCAMMIALSRMCDYKHHWQDSF 208
             A +IALSR CDYKHHWQ  F
Sbjct: 193 LFAAVIALSRTCDYKHHWQGPF 214


>gi|156523239 phosphatidic acid phosphatase type 2 domain containing
           1B isoform 3 [Homo sapiens]
          Length = 176

 Score =  194 bits (494), Expect = 5e-50
 Identities = 90/142 (63%), Positives = 116/142 (81%)

Query: 7   EIGVRALLFGVFVFTEFLDPFQRVIQPEEIWLYKNPLVQSDNIPTRLMFAISFLTPLAVI 66
           E+GVR  LF  F+ TE L PFQR+IQPEE+WLY+NP V+++  PT+ MF I+FL+PL++I
Sbjct: 13  EVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPMFVIAFLSPLSLI 72

Query: 67  CVVKIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGVMNSEM 126
            + K +++ D  + ++A LA SLALALNGV TNTIKLIVGRPRPDFFYRCFPDG+ +S++
Sbjct: 73  FLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHSDL 132

Query: 127 HCTGDPDLVSEGRKSFPSIHSS 148
            CTGD D+V+EGRKSFPS HSS
Sbjct: 133 MCTGDKDVVNEGRKSFPSGHSS 154


>gi|4505977 phosphatidic acid phosphatase type 2C isoform 1 [Homo
           sapiens]
          Length = 288

 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 55/186 (29%), Positives = 79/186 (42%), Gaps = 37/186 (19%)

Query: 92  ALNGVCTNTIKLIVGRPRPDFFYRCFPDG-------VMNSEMHCTGDPDLVSEGRKSFPS 144
           A++   T+  K ++GR RP+F   C PD         +  E  C G+P  V+E R SF S
Sbjct: 107 AVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYS 166

Query: 145 IHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILP------LYCAMMIALSRMC 198
            HSSF    + F   Y+  +L           W+    + P      +  A+ +  +R+ 
Sbjct: 167 GHSSFGMYCMVFLALYVQARL----------CWKWARLLRPTVQFFLVAFALYVGYTRVS 216

Query: 199 DYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANTACH-KPYVSLRVPASLKKEERPTADS 257
           DYKHHW D  VG + G + A           A T C+   +   R P    KEE    + 
Sbjct: 217 DYKHHWSDVLVGLLQGALVA-----------ALTVCYISDFFKARPPQHCLKEEE--LER 263

Query: 258 APSLPL 263
            PSL L
Sbjct: 264 KPSLSL 269


>gi|29171745 phosphatidic acid phosphatase type 2C isoform 2 [Homo
           sapiens]
          Length = 232

 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 55/186 (29%), Positives = 79/186 (42%), Gaps = 37/186 (19%)

Query: 92  ALNGVCTNTIKLIVGRPRPDFFYRCFPDG-------VMNSEMHCTGDPDLVSEGRKSFPS 144
           A++   T+  K ++GR RP+F   C PD         +  E  C G+P  V+E R SF S
Sbjct: 51  AVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYS 110

Query: 145 IHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILP------LYCAMMIALSRMC 198
            HSSF    + F   Y+  +L           W+    + P      +  A+ +  +R+ 
Sbjct: 111 GHSSFGMYCMVFLALYVQARL----------CWKWARLLRPTVQFFLVAFALYVGYTRVS 160

Query: 199 DYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANTACH-KPYVSLRVPASLKKEERPTADS 257
           DYKHHW D  VG + G + A           A T C+   +   R P    KEE    + 
Sbjct: 161 DYKHHWSDVLVGLLQGALVA-----------ALTVCYISDFFKARPPQHCLKEEE--LER 207

Query: 258 APSLPL 263
            PSL L
Sbjct: 208 KPSLSL 213


>gi|29171747 phosphatidic acid phosphatase type 2C isoform 3 [Homo
           sapiens]
          Length = 309

 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 55/186 (29%), Positives = 79/186 (42%), Gaps = 37/186 (19%)

Query: 92  ALNGVCTNTIKLIVGRPRPDFFYRCFPDG-------VMNSEMHCTGDPDLVSEGRKSFPS 144
           A++   T+  K ++GR RP+F   C PD         +  E  C G+P  V+E R SF S
Sbjct: 128 AVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYS 187

Query: 145 IHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILP------LYCAMMIALSRMC 198
            HSSF    + F   Y+  +L           W+    + P      +  A+ +  +R+ 
Sbjct: 188 GHSSFGMYCMVFLALYVQARL----------CWKWARLLRPTVQFFLVAFALYVGYTRVS 237

Query: 199 DYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANTACH-KPYVSLRVPASLKKEERPTADS 257
           DYKHHW D  VG + G + A           A T C+   +   R P    KEE    + 
Sbjct: 238 DYKHHWSDVLVGLLQGALVA-----------ALTVCYISDFFKARPPQHCLKEEE--LER 284

Query: 258 APSLPL 263
            PSL L
Sbjct: 285 KPSLSL 290


>gi|29171736 phosphatidic acid phosphatase type 2A isoform 1 [Homo
           sapiens]
          Length = 284

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 65/232 (28%), Positives = 97/232 (41%), Gaps = 46/232 (19%)

Query: 19  VFTEFLDPFQRVI--QPEEIWLYKNPLVQSDNIPTRLMFAISFLTPLAVICVV------- 69
           + T    PFQR +    E I   K P  + D IP  L+  I  + P ++I ++       
Sbjct: 26  ILTSRHTPFQRGVFCNDESI---KYPY-KEDTIPYALLGGI--IIPFSIIVIILGETLSV 79

Query: 70  --------KIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGV 121
                     IR      I +A        A +   T+  K  +GR RP F   C PD  
Sbjct: 80  YCNLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSIGRLRPHFLDVCDPDW- 138

Query: 122 MNSEMHCT----------GDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTES 171
             S+++C+          G+ + V EGR SF S HSSF+   + F   YL  ++      
Sbjct: 139 --SKINCSDGYIEYYICRGNAERVKEGRLSFYSGHSSFSMYCMLFVALYLQARM------ 190

Query: 172 GRGKSWRLCAAILP---LYCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYI 220
            +G   RL    L    +  ++ + LSR+ DYKHHW D   G + G + A +
Sbjct: 191 -KGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHHWSDVLTGLIQGALVAIL 241


>gi|82659094 phosphatidic acid phosphatase type 2d isoform 1 [Homo
           sapiens]
          Length = 321

 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 30/168 (17%)

Query: 71  IIRRTDKTEIKEAFLAV-SLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGV-------- 121
           ++RRT +      FL + +  L    +  N  +++ G   P F   C P+          
Sbjct: 115 LVRRTVR------FLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYT 168

Query: 122 --MNSEMHCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRL 179
             ++ E  CTG+PDL+   RK+FPS  ++ +     + T Y+       T + + K  RL
Sbjct: 169 QFISGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYI-------TNTIKAKGTRL 221

Query: 180 CAAI--LPLYC-AMMIALSRMCDYKHHWQDSFVGGVIGL---IFAYIC 221
              +  L L C A +  L+R+ +Y++HW D   G ++G+   +F  +C
Sbjct: 222 AKPVLCLGLMCLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVC 269


>gi|61102719 phosphatidic acid phosphatase type 2d isoform 2 [Homo
           sapiens]
          Length = 316

 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 30/168 (17%)

Query: 71  IIRRTDKTEIKEAFLAV-SLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGV-------- 121
           ++RRT +      FL + +  L    +  N  +++ G   P F   C P+          
Sbjct: 115 LVRRTVR------FLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYT 168

Query: 122 --MNSEMHCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRL 179
             ++ E  CTG+PDL+   RK+FPS  ++ +     + T Y+       T + + K  RL
Sbjct: 169 QFISGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYI-------TNTIKAKGTRL 221

Query: 180 CAAI--LPLYC-AMMIALSRMCDYKHHWQDSFVGGVIGL---IFAYIC 221
              +  L L C A +  L+R+ +Y++HW D   G ++G+   +F  +C
Sbjct: 222 AKPVLCLGLMCLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVC 269


>gi|29171738 phosphatidic acid phosphatase type 2A isoform 2 [Homo
           sapiens]
          Length = 285

 Score = 61.6 bits (148), Expect = 7e-10
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 23/136 (16%)

Query: 98  TNTIKLIVGRPRPDFFYRCFPDGVMNSEMHCT----------GDPDLVSEGRKSFPSIHS 147
           T+  K  +GR RP F   C PD    S+++C+          G+ + V EGR SF S HS
Sbjct: 117 TDIAKYSIGRLRPHFLDVCDPDW---SKINCSDGYIEYYICRGNAERVKEGRLSFYSGHS 173

Query: 148 SFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILP---LYCAMMIALSRMCDYKHHW 204
           SF+   + F   YL  ++       +G   RL    L    +  ++ + LSR+ DYKHHW
Sbjct: 174 SFSMYCMLFVALYLQARM-------KGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHHW 226

Query: 205 QDSFVGGVIGLIFAYI 220
            D   G + G + A +
Sbjct: 227 SDVLTGLIQGALVAIL 242


>gi|29171740 phosphatidic acid phosphatase type 2B [Homo sapiens]
          Length = 311

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 31/202 (15%)

Query: 40  KNPLVQSDNIPTRLMFAISFLTPLAVICVVKIIR----RTDKTEIKEAFLAVS------- 88
           K PL   + I   ++ A+  +  +  I   +  R    +  ++ I+  ++A         
Sbjct: 74  KYPLKTGETINDAVLCAVGIVIAILAIITGEFYRIYYLKKSRSTIQNPYVAALYKQVGCF 133

Query: 89  -LALALNGVCTNTIKLIVGRPRPDFFYRCFPD--------GVMNSEMHCTGDPDLVSEGR 139
               A++   T+  K+ +GR RP F   C PD        G + +   C GD   V E R
Sbjct: 134 LFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQN-YRCRGDDSKVQEAR 192

Query: 140 KSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILPLYCAMM---IALSR 196
           KSF S H+SF+   + +   YL  +   FT  G     RL   +L     MM     LSR
Sbjct: 193 KSFFSGHASFSMYTMLYLVLYLQAR---FTWRGA----RLLRPLLQFTLIMMAFYTGLSR 245

Query: 197 MCDYKHHWQDSFVGGVIGLIFA 218
           + D+KHH  D   G   G + A
Sbjct: 246 VSDHKHHPSDVLAGFAQGALVA 267


>gi|29171742 phosphatidic acid phosphatase type 2B [Homo sapiens]
          Length = 311

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 31/202 (15%)

Query: 40  KNPLVQSDNIPTRLMFAISFLTPLAVICVVKIIR----RTDKTEIKEAFLAVS------- 88
           K PL   + I   ++ A+  +  +  I   +  R    +  ++ I+  ++A         
Sbjct: 74  KYPLKTGETINDAVLCAVGIVIAILAIITGEFYRIYYLKKSRSTIQNPYVAALYKQVGCF 133

Query: 89  -LALALNGVCTNTIKLIVGRPRPDFFYRCFPD--------GVMNSEMHCTGDPDLVSEGR 139
               A++   T+  K+ +GR RP F   C PD        G + +   C GD   V E R
Sbjct: 134 LFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQN-YRCRGDDSKVQEAR 192

Query: 140 KSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILPLYCAMM---IALSR 196
           KSF S H+SF+   + +   YL  +   FT  G     RL   +L     MM     LSR
Sbjct: 193 KSFFSGHASFSMYTMLYLVLYLQAR---FTWRGA----RLLRPLLQFTLIMMAFYTGLSR 245

Query: 197 MCDYKHHWQDSFVGGVIGLIFA 218
           + D+KHH  D   G   G + A
Sbjct: 246 VSDHKHHPSDVLAGFAQGALVA 267


>gi|46877066 plasticity related gene 3 [Homo sapiens]
          Length = 325

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 88  SLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGV----------MNSEMHCTGDPDLVSE 137
           +  L    +  N  +++ G   P F   C P+            +N+   CTGD +++ +
Sbjct: 132 AFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEK 191

Query: 138 GRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAIL---PLYCAMMIAL 194
            R+SFPS H++ +     + T Y+       T + + KS RL   +L    L  A +  L
Sbjct: 192 ARRSFPSKHAALSIYSALYATMYI-------TSTIKTKSSRLAKPVLCLGTLCTAFLTGL 244

Query: 195 SRMCDYKHHWQDSFVGGVIGLIFA 218
           +R+ +Y++H  D   G ++G   A
Sbjct: 245 NRVSEYRNHCSDVIAGFILGTAVA 268


>gi|46877064 plasticity related gene 3 [Homo sapiens]
          Length = 325

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 88  SLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGV----------MNSEMHCTGDPDLVSE 137
           +  L    +  N  +++ G   P F   C P+            +N+   CTGD +++ +
Sbjct: 132 AFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEK 191

Query: 138 GRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAIL---PLYCAMMIAL 194
            R+SFPS H++ +     + T Y+       T + + KS RL   +L    L  A +  L
Sbjct: 192 ARRSFPSKHAALSIYSALYATMYI-------TSTIKTKSSRLAKPVLCLGTLCTAFLTGL 244

Query: 195 SRMCDYKHHWQDSFVGGVIGLIFA 218
           +R+ +Y++H  D   G ++G   A
Sbjct: 245 NRVSEYRNHCSDVIAGFILGTAVA 268


>gi|12232395 lipid phosphate phosphatase-related protein type 2
           [Homo sapiens]
          Length = 343

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 24/154 (15%)

Query: 84  FLAV-SLALALNGVCTNTIKLIVGRPRPDFFYRCFP-----------------DGVMNSE 125
           FL V S  L    +  N  +++ G P P F   C P                 D  +  +
Sbjct: 129 FLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPSPDRPGPDRFVTDQ 188

Query: 126 MHCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILP 185
             C G P LV+  R++FP   ++     + +T  Y+   L    +  R     LC A+L 
Sbjct: 189 GACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVT--LVFRVKGSRLVKPSLCLALL- 245

Query: 186 LYC-AMMIALSRMCDYKHHWQDSFVGGVIGLIFA 218
             C A ++ + R+ +Y++HW D   G + G   A
Sbjct: 246 --CPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIA 277


>gi|33636722 plasticity related gene 1 [Homo sapiens]
          Length = 763

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 16/135 (11%)

Query: 91  LALNGVCTNTIKLIVGRPRPDFFYRCFPDGVM-------NS---EMHCTG-DPDLVSEGR 139
           L    + T+ I+L  G   P F   C P+          NS   E  C+G D  +++ GR
Sbjct: 186 LCSTALITDIIQLSTGYQAPYFLTVCKPNYTSLNVSCKENSYIVEDICSGSDLTVINSGR 245

Query: 140 KSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILPLYCAMMIALSRMCD 199
           KSFPS H++ A     + + Y    L   T+S   K  +       + C ++  L+R+  
Sbjct: 246 KSFPSQHATLAAFAAVYVSMYFNSTL---TDS--SKLLKPLLVFTFIICGIICGLTRITQ 300

Query: 200 YKHHWQDSFVGGVIG 214
           YK+H  D + G +IG
Sbjct: 301 YKNHPVDVYCGFLIG 315


>gi|30794376 dolichyl pyrophosphate phosphatase 1 isoform a [Homo
           sapiens]
          Length = 238

 Score = 33.1 bits (74), Expect = 0.26
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 21/130 (16%)

Query: 91  LALNGVCTNTIKLIVGRPRPDFFYRCFPDGVMNSEMHCTGDPDLVSEGRKSFPSIHSSFA 150
           LALN      IK ++  PRP                   G P      +   PS HS F 
Sbjct: 66  LALNEGVNWLIKNVIQEPRP------------------CGGPHTAVGTKYGMPSSHSQFM 107

Query: 151 FSGLGFTTFYLAGKLHCFTESGRGKS--WRLCAAILPLYCAMMIALSRMCDYKHHWQDSF 208
           +    ++  +L  ++H  T + R     WR   ++  L  A +++ SR+    H W    
Sbjct: 108 WFFSVYSFLFLYLRMHQ-TNNARFLDLLWRHVLSLGLLAVAFLVSYSRVYLLYHTWSQVL 166

Query: 209 VGGVIGLIFA 218
            GG+ G + A
Sbjct: 167 YGGIAGGLMA 176


>gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens]
          Length = 543

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 26/95 (27%), Positives = 32/95 (33%), Gaps = 16/95 (16%)

Query: 167 CFTESGRGKSWRLCAAILPLYCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYICYRQHY 226
           CF  S RG     C A L  YC +   L   C ++H W                C R H 
Sbjct: 265 CFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFRHSWDKQ-------------CDRCHM 311

Query: 227 PPLANTAC---HKPYVSLRVPASLKKEERPTADSA 258
                 AC    + Y     P   KK + P+  SA
Sbjct: 312 LGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSA 346


>gi|72384339 CUB domain containing protein 2 [Homo sapiens]
          Length = 449

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 15/96 (15%)

Query: 71  IIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGVMNSEMHC-- 128
           +IR      +K  F  V   +  N  CT     ++G P P                +C  
Sbjct: 174 VIRAAGPAHVKLVF--VDFQVEGNEECTYDYVAVLGGPGPT-----------RGHHYCGS 220

Query: 129 TGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGK 164
           T  P LVS G +      S F   G GF  +Y +G+
Sbjct: 221 TRPPTLVSLGHELQVVFKSDFNIGGRGFKAYYFSGE 256


>gi|209529678 sarcospan isoform 2 [Homo sapiens]
          Length = 140

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 158 TFYLAGKLHCFTESGRGKSWRLCAAILPLYCAMMIALSRMCDYKHHWQDSFVG 210
           TF       C + +G  K + L   IL L C ++  L+    +KH +Q  +VG
Sbjct: 72  TFVYRDVTDCTSVTGTFKLFLLIQMILNLVCGLVCLLACFVMWKHRYQVFYVG 124


>gi|16933561 sarcospan isoform 1 [Homo sapiens]
          Length = 243

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 158 TFYLAGKLHCFTESGRGKSWRLCAAILPLYCAMMIALSRMCDYKHHWQDSFVG 210
           TF       C + +G  K + L   IL L C ++  L+    +KH +Q  +VG
Sbjct: 175 TFVYRDVTDCTSVTGTFKLFLLIQMILNLVCGLVCLLACFVMWKHRYQVFYVG 227


>gi|239047271 autophagy related 2A [Homo sapiens]
          Length = 1938

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)

Query: 243  VPASLKKEERPTADSAPSLPLEGITEG 269
            VP     E RP   + PS PLEG  EG
Sbjct: 1612 VPGETSAEARPETRAQPSSPLEGQAEG 1638


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.142    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,864,936
Number of Sequences: 37866
Number of extensions: 497156
Number of successful extensions: 1323
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1275
Number of HSP's gapped (non-prelim): 28
length of query: 271
length of database: 18,247,518
effective HSP length: 101
effective length of query: 170
effective length of database: 14,423,052
effective search space: 2451918840
effective search space used: 2451918840
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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