Guide to the Human Genome
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Name: PLAA Sequence: fasta or formatted (795aa) NCBI GI: 72534670
Description:

phospholipase A2-activating protein

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         53           2
 C cysteine            3.4         27           3
 D aspartate           5.3         42           2
 E glutamate           5.7         45           2
 F phenylalanine       3.8         30           1
 G glycine             7.8         62           3
 H histidine           2.3         18           1
 I isoleucine          6.0         48           2
 K lysine              5.5         44           2
 L leucine             9.8         78           2
 M methionine          1.9         15           2
 N asparagine          5.0         40           1
 P proline             4.3         34           2
 Q glutamine           3.4         27           2
 R arginine            4.0         32           2
 S serine              9.6         76           3
 T threonine           6.2         49           2
 V valine              5.4         43           2
 W tryptophan          1.5         12           1
 Y tyrosine            2.5         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2-activating protein 
WDR69                 0.052   WD repeat domain 69 
FBXW7                 0.044   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.044   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.044   F-box and WD repeat domain containing 7 isoform 2 [H...
PAFAH1B1              0.043   platelet-activating factor acetylhydrolase, isoform I...
WDR5B                 0.040   WD repeat domain 5B 
TAF5L                 0.038   PCAF associated factor 65 beta isoform a 
FBXW11                0.038   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.038   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.038   F-box and WD repeat domain containing 11 isoform B [...
TBL3                  0.037   transducin beta-like 3 
KATNB1                0.036   katanin p80 subunit B 1 
WDR5                  0.036   WD repeat domain 5 
WDR5                  0.036   WD repeat domain 5 
BTRC                  0.035   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.035   beta-transducin repeat containing protein isoform 1 ...
WDR38                 0.035   WD repeat domain 38 
COPB2                 0.034   coatomer protein complex, subunit beta 2 (beta prime)...
SPAG16                0.033   sperm associated antigen 16 isoform 1 
WDR3                  0.033   WD repeat-containing protein 3 
RRP9                  0.032   RNA, U3 small nucleolar interacting protein 2 
PLRG1                 0.031   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
WSB2                  0.031   WD SOCS-box protein 2 
GNB2L1                0.031   guanine nucleotide binding protein (G protein), beta ...
TAF5                  0.031   TBP-associated factor 5 
WDR86                 0.031   WD repeat domain 86 
WDR51B                0.029   WD repeat domain 51B 
WDR51A                0.029   WD repeat domain 51A isoform 1 
WDR17                 0.029   WD repeat domain 17 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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