Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 71274111
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene
homolog A [Homo sapiens]
(353 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 747 0.0
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 319 2e-87
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 319 2e-87
gi|23308699 transcription factor MAFB [Homo sapiens] 306 2e-83
gi|5453802 neural retina leucine zipper [Homo sapiens] 199 3e-51
gi|4505075 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 108 9e-24
gi|4505073 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 107 2e-23
gi|49619228 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 107 2e-23
gi|239048388 transcription factor MAFF isoform a [Homo sapiens] 97 3e-20
gi|239048350 transcription factor MAFF isoform a [Homo sapiens] 97 3e-20
gi|6912490 transcription factor MAFF isoform a [Homo sapiens] 97 3e-20
gi|239048390 transcription factor MAFF isoform b [Homo sapiens] 91 2e-18
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 75 9e-14
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 69 8e-12
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 69 8e-12
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 69 8e-12
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 63 5e-10
gi|110624765 POU domain, class 3, transcription factor 1 [Homo s... 62 8e-10
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 61 1e-09
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 59 9e-09
gi|20070107 orthodenticle homeobox 1 [Homo sapiens] 57 3e-08
gi|122937233 discs, large (Drosophila) homolog-associated protei... 55 7e-08
gi|40288197 GATA binding protein 6 [Homo sapiens] 54 2e-07
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 52 6e-07
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 52 6e-07
gi|61966923 forkhead box B2 [Homo sapiens] 52 6e-07
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 52 6e-07
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 52 6e-07
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 52 8e-07
gi|4504809 jun B proto-oncogene [Homo sapiens] 52 1e-06
>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
A [Homo sapiens]
Length = 353
Score = 747 bits (1928), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 1 MAAELAMGAELPSSPLAIEYVNDFDLMKFEVKKEPPEAERFCHRLPPGSLSSTPLSTPCS 60
MAAELAMGAELPSSPLAIEYVNDFDLMKFEVKKEPPEAERFCHRLPPGSLSSTPLSTPCS
Sbjct: 1 MAAELAMGAELPSSPLAIEYVNDFDLMKFEVKKEPPEAERFCHRLPPGSLSSTPLSTPCS 60
Query: 61 SVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMS 120
SVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMS
Sbjct: 61 SVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMS 120
Query: 121 GYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGADDM 180
GYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGADDM
Sbjct: 121 GYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGADDM 180
Query: 181 GAGHHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSDDQLVSMSVREL 240
GAGHHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSDDQLVSMSVREL
Sbjct: 181 GAGHHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSDDQLVSMSVREL 240
Query: 241 NRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEV 300
NRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEV
Sbjct: 241 NRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEV 300
Query: 301 GRLAKERDLYKEKYEKLAGRGGPGSAGGAGFPREPSPPQAGPGGAKGTADFFL 353
GRLAKERDLYKEKYEKLAGRGGPGSAGGAGFPREPSPPQAGPGGAKGTADFFL
Sbjct: 301 GRLAKERDLYKEKYEKLAGRGGPGSAGGAGFPREPSPPQAGPGGAKGTADFFL 353
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 319 bits (818), Expect = 2e-87
Identities = 197/399 (49%), Positives = 224/399 (56%), Gaps = 94/399 (23%)
Query: 1 MAAELAMG-AELPSSPLAIEYVNDFDLMKFEVKKEPPEAERF---CHRL-PPGSLSSTPL 55
MA+ELAM ++LP+SPLA+EYVNDFDLMKFEVKKEP E +R C RL GSLSSTP+
Sbjct: 1 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60
Query: 56 STPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALED 115
STPCSSVP SPSF APSPG+G + K LED
Sbjct: 61 STPCSSVPPSPSFSAPSPGSG------------------------------SEQKAHLED 90
Query: 116 LYWMSGYQHHLNPEALNLTPEDAVEALIGSGHH--GAHHGAHHPAAAAAYEAFRGPGFAG 173
YWM+GY LNPEAL +PEDAVEALI + H G G A A A G G +
Sbjct: 91 YYWMTGYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGAGASL 150
Query: 174 GGGADDMG--------------AGHHHGAHHAAHHHHAAHHHHHHHH------------- 206
GG ++MG A G H+ HHHHAA HHHH
Sbjct: 151 GGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASA 210
Query: 207 ------------HHGGAGHGGGAG--------------HH----VRLEERFSDDQLVSMS 236
GG G GGG G HH + ++RFSD+QLV+MS
Sbjct: 211 GGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMS 270
Query: 237 VRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQL 296
VRELNRQLRG SKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRH+LESEK QL QV+ L
Sbjct: 271 VRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHL 330
Query: 297 KLEVGRLAKERDLYKEKYEKLAGRGGPGSAGGAGFPREP 335
K E+ RL +ERD YKEKYEKL G + + P P
Sbjct: 331 KQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSSP 369
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 319 bits (818), Expect = 2e-87
Identities = 197/399 (49%), Positives = 224/399 (56%), Gaps = 94/399 (23%)
Query: 1 MAAELAMG-AELPSSPLAIEYVNDFDLMKFEVKKEPPEAERF---CHRL-PPGSLSSTPL 55
MA+ELAM ++LP+SPLA+EYVNDFDLMKFEVKKEP E +R C RL GSLSSTP+
Sbjct: 1 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60
Query: 56 STPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALED 115
STPCSSVP SPSF APSPG+G + K LED
Sbjct: 61 STPCSSVPPSPSFSAPSPGSG------------------------------SEQKAHLED 90
Query: 116 LYWMSGYQHHLNPEALNLTPEDAVEALIGSGHH--GAHHGAHHPAAAAAYEAFRGPGFAG 173
YWM+GY LNPEAL +PEDAVEALI + H G G A A A G G +
Sbjct: 91 YYWMTGYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGAGASL 150
Query: 174 GGGADDMG--------------AGHHHGAHHAAHHHHAAHHHHHHHH------------- 206
GG ++MG A G H+ HHHHAA HHHH
Sbjct: 151 GGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASA 210
Query: 207 ------------HHGGAGHGGGAG--------------HH----VRLEERFSDDQLVSMS 236
GG G GGG G HH + ++RFSD+QLV+MS
Sbjct: 211 GGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMS 270
Query: 237 VRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQL 296
VRELNRQLRG SKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRH+LESEK QL QV+ L
Sbjct: 271 VRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHL 330
Query: 297 KLEVGRLAKERDLYKEKYEKLAGRGGPGSAGGAGFPREP 335
K E+ RL +ERD YKEKYEKL G + + P P
Sbjct: 331 KQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSSP 369
>gi|23308699 transcription factor MAFB [Homo sapiens]
Length = 323
Score = 306 bits (783), Expect = 2e-83
Identities = 192/377 (50%), Positives = 215/377 (57%), Gaps = 100/377 (26%)
Query: 1 MAAELAMGAELPSSPLAIEYVNDFDLMKFEVKKEP----PEAERFCHRLPP-GSLSSTPL 55
MAAEL+MG ELP+SPLA+EYVNDFDL+KF+VKKEP R C RL P GS+SSTPL
Sbjct: 1 MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPL 60
Query: 56 STPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALED 115
STPCSSVPSSPSF SP T K LED
Sbjct: 61 STPCSSVPSSPSF---SP---------------------------------TEQKTHLED 84
Query: 116 LYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGG 175
LYWM+ +NPEALNLTPEDAVEALIGS H P + +++FRG
Sbjct: 85 LYWMASNYQQMNPEALNLTPEDAVEALIGS------HPVPQPLQS--FDSFRG------- 129
Query: 176 GADDMGAGHHHGAHHAAHHHHA--------------AHHHHHHHHH-------------- 207
HHH HH H HHA AH HHHHHH
Sbjct: 130 -------AHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPAQQ 182
Query: 208 ----HGGAG-----HGGGAGHHVRLEERFSDDQLVSMSVRELNRQLRGFSKEEVIRLKQK 258
H G G AG + +E+RFSDDQLVSMSVRELNR LRGF+K+EVIRLKQK
Sbjct: 183 LPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQK 242
Query: 259 RRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRLAKERDLYKEKYEKLA 318
RRTLKNRGYAQSCR+KRVQQ+H LE+EK QL QVEQLK EV RLA+ERD YK K EKLA
Sbjct: 243 RRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLA 302
Query: 319 GRGGPGSAGGAGFPREP 335
G + + P P
Sbjct: 303 NSGFREAGSTSDSPSSP 319
>gi|5453802 neural retina leucine zipper [Homo sapiens]
Length = 237
Score = 199 bits (506), Expect = 3e-51
Identities = 134/317 (42%), Positives = 169/317 (53%), Gaps = 92/317 (29%)
Query: 11 LPSSPLAIEYVNDFDLMKFEVKKEPPEAERFCHRLPPGSLSSTPLSTPCSSVPSSPSFCA 70
LP SPLA+EYVNDFDLMKFEVK+EP E PG +++ STP SSVP SP+F
Sbjct: 3 LPPSPLAMEYVNDFDLMKFEVKREPSEGR-------PGPPTASLGSTPYSSVPPSPTFSE 55
Query: 71 PSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSG-KPALEDLYWMSGYQHHLNP- 128
P G VG T G +P LE+LYW++ Q L
Sbjct: 56 P------------------------------GMVGATEGTRPGLEELYWLATLQQQLGAG 85
Query: 129 EALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGADDMGAGHHHGA 188
EAL L+PE+A+E L G +GP G
Sbjct: 86 EALGLSPEEAMELLQG----------------------QGPVPVDGP------------- 110
Query: 189 HHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSDDQLVSMSVRELNRQLRGFS 248
H ++ G+ GA HV+L ERFSD LVSMSVRELNRQLRG
Sbjct: 111 ----------------HGYYPGSPEETGA-QHVQLAERFSDAALVSMSVRELNRQLRGCG 153
Query: 249 KEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRLAKERD 308
++E +RLKQ+RRTLKNRGYAQ+CR KR+QQR LE+E+ +L +Q++ L+ EV RLA+ERD
Sbjct: 154 RDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALRAEVARLARERD 213
Query: 309 LYKEKYEKLAGRGGPGS 325
LYK + ++L GPGS
Sbjct: 214 LYKARCDRLTS-SGPGS 229
>gi|4505075 v-maf musculoaponeurotic fibrosarcoma oncogene homolog K
[Homo sapiens]
Length = 156
Score = 108 bits (269), Expect = 9e-24
Identities = 55/90 (61%), Positives = 67/90 (74%)
Query: 228 SDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKC 287
SDD+LVSMSVRELN+ LRG +KEEV RLKQ+RRTLKNRGYA SCR KRV Q+ LE ++
Sbjct: 25 SDDELVSMSVRELNQHLRGLTKEEVTRLKQRRRTLKNRGYAASCRIKRVTQKEELERQRV 84
Query: 288 QLQSQVEQLKLEVGRLAKERDLYKEKYEKL 317
+LQ +VE+L E + E D + KYE L
Sbjct: 85 ELQQEVEKLARENSSMRLELDALRSKYEAL 114
>gi|4505073 v-maf musculoaponeurotic fibrosarcoma oncogene homolog G
[Homo sapiens]
Length = 162
Score = 107 bits (266), Expect = 2e-23
Identities = 57/115 (49%), Positives = 73/115 (63%), Gaps = 7/115 (6%)
Query: 228 SDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKC 287
+D++LV+MSVRELN+ LRG SKEE+++LKQ+RRTLKNRGYA SCR KRV Q+ LE +K
Sbjct: 25 TDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKA 84
Query: 288 QLQSQVEQLKLEVGRLAKERDLYKEKYEKLAGRGGPGSAGGAGFPREPSPPQAGP 342
+LQ +VE+L E + E D + KYE L R P P GP
Sbjct: 85 ELQQEVEKLASENASMKLELDALRSKYEAL-------QTFARTVARSPVAPARGP 132
>gi|49619228 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
G [Homo sapiens]
Length = 162
Score = 107 bits (266), Expect = 2e-23
Identities = 57/115 (49%), Positives = 73/115 (63%), Gaps = 7/115 (6%)
Query: 228 SDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKC 287
+D++LV+MSVRELN+ LRG SKEE+++LKQ+RRTLKNRGYA SCR KRV Q+ LE +K
Sbjct: 25 TDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKA 84
Query: 288 QLQSQVEQLKLEVGRLAKERDLYKEKYEKLAGRGGPGSAGGAGFPREPSPPQAGP 342
+LQ +VE+L E + E D + KYE L R P P GP
Sbjct: 85 ELQQEVEKLASENASMKLELDALRSKYEAL-------QTFARTVARSPVAPARGP 132
>gi|239048388 transcription factor MAFF isoform a [Homo sapiens]
Length = 164
Score = 96.7 bits (239), Expect = 3e-20
Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 228 SDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKC 287
SD+ L+ +SVRELNR LRG S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K
Sbjct: 25 SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84
Query: 288 QLQSQVEQLKLEVGRLAKERDLYKEKYEKLAG--RGGPGSAGGA-------------GFP 332
+L+ +V++L E + E D + K E L G R + G A P
Sbjct: 85 ELEREVDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTP 144
Query: 333 REPSPPQAGPGGAKGTA 349
S P GP A G A
Sbjct: 145 GSGSGPAHGPDPAHGPA 161
>gi|239048350 transcription factor MAFF isoform a [Homo sapiens]
Length = 164
Score = 96.7 bits (239), Expect = 3e-20
Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 228 SDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKC 287
SD+ L+ +SVRELNR LRG S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K
Sbjct: 25 SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84
Query: 288 QLQSQVEQLKLEVGRLAKERDLYKEKYEKLAG--RGGPGSAGGA-------------GFP 332
+L+ +V++L E + E D + K E L G R + G A P
Sbjct: 85 ELEREVDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTP 144
Query: 333 REPSPPQAGPGGAKGTA 349
S P GP A G A
Sbjct: 145 GSGSGPAHGPDPAHGPA 161
>gi|6912490 transcription factor MAFF isoform a [Homo sapiens]
Length = 164
Score = 96.7 bits (239), Expect = 3e-20
Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 228 SDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKC 287
SD+ L+ +SVRELNR LRG S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K
Sbjct: 25 SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84
Query: 288 QLQSQVEQLKLEVGRLAKERDLYKEKYEKLAG--RGGPGSAGGA-------------GFP 332
+L+ +V++L E + E D + K E L G R + G A P
Sbjct: 85 ELEREVDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTP 144
Query: 333 REPSPPQAGPGGAKGTA 349
S P GP A G A
Sbjct: 145 GSGSGPAHGPDPAHGPA 161
>gi|239048390 transcription factor MAFF isoform b [Homo sapiens]
Length = 135
Score = 90.9 bits (224), Expect = 2e-18
Identities = 58/132 (43%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 233 VSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQ 292
+ +SVRELNR LRG S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K +L+ +
Sbjct: 1 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60
Query: 293 VEQLKLEVGRLAKERDLYKEKYEKLAG--RGGPGSAGGA-------------GFPREPSP 337
V++L E + E D + K E L G R + G A P S
Sbjct: 61 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG 120
Query: 338 PQAGPGGAKGTA 349
P GP A G A
Sbjct: 121 PAHGPDPAHGPA 132
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 75.1 bits (183), Expect = 9e-14
Identities = 52/170 (30%), Positives = 60/170 (35%), Gaps = 9/170 (5%)
Query: 43 HRLPPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPG 102
H PGS S P + SSPS + + G GGGGG GGGGG + + SGG G
Sbjct: 30 HSTSPGS------SAPIAPSASSPSSSSNAGGGGGGGGGGGGGGGRSSSSSSSGSSGGGG 83
Query: 103 AVGGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAA 162
+ G L A L D V HH HH P A
Sbjct: 84 SEAMRRACLPTPPSNIFGGLDESLLARAEALAAVDIVSQSKSHHHHPPHHSPFKPDAT-- 141
Query: 163 YEAFRGPGFAGGGGADDMGAGHHHGAHHAAHHHHAAHHHHHHHHHHGGAG 212
Y + + H A HHHH HHHHHH H G
Sbjct: 142 YHTMNTIPCTSAASSSSVPISHP-SALAGTHHHHHHHHHHHHQPHQALEG 190
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 68.6 bits (166), Expect = 8e-12
Identities = 63/202 (31%), Positives = 73/202 (36%), Gaps = 36/202 (17%)
Query: 41 FCHRLPPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGG---------GGAGGGGGSSQAG 91
FC PP + P+ T P PS + G GG GS++A
Sbjct: 467 FCMFWPPRTPGGLPVPTYLQPPPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAA 526
Query: 92 GAPGPP---------SGGPGAVGGTSGKPAL-EDLYWMSGYQHHLN--PEALNLTPEDAV 139
PG P SG P GG + AL E SG P A ++ A
Sbjct: 527 PPPGQPPQVVANGPGSGPPPPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAG 586
Query: 140 EALIGSGHHGAHHGA-HHPAAAAAYEAFRGP-----GFAGGGGADDM---------GAGH 184
A GSG G+ A HHP +A G F GG DD AG
Sbjct: 587 AAAAGSGPAGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGA 646
Query: 185 HHGAHHAAHHHHAAHHHHHHHH 206
H A HHHH HHHHHHHH
Sbjct: 647 PHSAQTHPHHHHHPHHHHHHHH 668
Score = 36.2 bits (82), Expect = 0.046
Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 17/135 (12%)
Query: 54 PLSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPAL 113
P P SSV ++ A + GGGG G GAP PP P + +G P
Sbjct: 251 PACHPLSSVKAAA--VAAAAAVAGGGGLLG----PHLLGAPPPPPPPPPPLAELAGAP-- 302
Query: 114 EDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAG 173
+ HH P + + EA + + + A AAA+ A G G AG
Sbjct: 303 --------HAHHKRPR-FDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAGTGGGGAG 353
Query: 174 GGGADDMGAGHHHGA 188
GG +G G GA
Sbjct: 354 GGCVAGVGVGAGAGA 368
Score = 33.5 bits (75), Expect = 0.30
Identities = 37/123 (30%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 60 SSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSG-GPGAVGGTSGKPALEDLYW 118
S+ +S S A S G G GGG GGG + G G +G G GA G S
Sbjct: 330 SAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKG 389
Query: 119 MSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGAD 178
G P L P + H A AA EA G G G G A
Sbjct: 390 SFGGVLQKFPGCGGLFPHPYTFPAAAAAFSLCH---KKEDAGAAAEALGGAGAGGAGAAP 446
Query: 179 DMG 181
G
Sbjct: 447 KAG 449
Score = 28.9 bits (63), Expect = 7.3
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 60 SSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSG 109
+S+ ++ + + + +GG G GGG G G G GA G G
Sbjct: 327 ASLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKG 376
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 68.6 bits (166), Expect = 8e-12
Identities = 63/202 (31%), Positives = 73/202 (36%), Gaps = 36/202 (17%)
Query: 41 FCHRLPPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGG---------GGAGGGGGSSQAG 91
FC PP + P+ T P PS + G GG GS++A
Sbjct: 467 FCMFWPPRTPGGLPVPTYLQPPPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAA 526
Query: 92 GAPGPP---------SGGPGAVGGTSGKPAL-EDLYWMSGYQHHLN--PEALNLTPEDAV 139
PG P SG P GG + AL E SG P A ++ A
Sbjct: 527 PPPGQPPQVVANGPGSGPPPPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAG 586
Query: 140 EALIGSGHHGAHHGA-HHPAAAAAYEAFRGP-----GFAGGGGADDM---------GAGH 184
A GSG G+ A HHP +A G F GG DD AG
Sbjct: 587 AAAAGSGPAGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGA 646
Query: 185 HHGAHHAAHHHHAAHHHHHHHH 206
H A HHHH HHHHHHHH
Sbjct: 647 PHSAQTHPHHHHHPHHHHHHHH 668
Score = 36.2 bits (82), Expect = 0.046
Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 17/135 (12%)
Query: 54 PLSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPAL 113
P P SSV ++ A + GGGG G GAP PP P + +G P
Sbjct: 251 PACHPLSSVKAAA--VAAAAAVAGGGGLLG----PHLLGAPPPPPPPPPPLAELAGAP-- 302
Query: 114 EDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAG 173
+ HH P + + EA + + + A AAA+ A G G AG
Sbjct: 303 --------HAHHKRPR-FDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAGTGGGGAG 353
Query: 174 GGGADDMGAGHHHGA 188
GG +G G GA
Sbjct: 354 GGCVAGVGVGAGAGA 368
Score = 33.5 bits (75), Expect = 0.30
Identities = 37/123 (30%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 60 SSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSG-GPGAVGGTSGKPALEDLYW 118
S+ +S S A S G G GGG GGG + G G +G G GA G S
Sbjct: 330 SAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKG 389
Query: 119 MSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGAD 178
G P L P + H A AA EA G G G G A
Sbjct: 390 SFGGVLQKFPGCGGLFPHPYTFPAAAAAFSLCH---KKEDAGAAAEALGGAGAGGAGAAP 446
Query: 179 DMG 181
G
Sbjct: 447 KAG 449
Score = 28.9 bits (63), Expect = 7.3
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 60 SSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSG 109
+S+ ++ + + + +GG G GGG G G G GA G G
Sbjct: 327 ASLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKG 376
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 68.6 bits (166), Expect = 8e-12
Identities = 63/202 (31%), Positives = 73/202 (36%), Gaps = 36/202 (17%)
Query: 41 FCHRLPPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGG---------GGAGGGGGSSQAG 91
FC PP + P+ T P PS + G GG GS++A
Sbjct: 467 FCMFWPPRTPGGLPVPTYLQPPPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAA 526
Query: 92 GAPGPP---------SGGPGAVGGTSGKPAL-EDLYWMSGYQHHLN--PEALNLTPEDAV 139
PG P SG P GG + AL E SG P A ++ A
Sbjct: 527 PPPGQPPQVVANGPGSGPPPPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAG 586
Query: 140 EALIGSGHHGAHHGA-HHPAAAAAYEAFRGP-----GFAGGGGADDM---------GAGH 184
A GSG G+ A HHP +A G F GG DD AG
Sbjct: 587 AAAAGSGPAGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGA 646
Query: 185 HHGAHHAAHHHHAAHHHHHHHH 206
H A HHHH HHHHHHHH
Sbjct: 647 PHSAQTHPHHHHHPHHHHHHHH 668
Score = 36.2 bits (82), Expect = 0.046
Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 17/135 (12%)
Query: 54 PLSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPAL 113
P P SSV ++ A + GGGG G GAP PP P + +G P
Sbjct: 251 PACHPLSSVKAAA--VAAAAAVAGGGGLLG----PHLLGAPPPPPPPPPPLAELAGAP-- 302
Query: 114 EDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAG 173
+ HH P + + EA + + + A AAA+ A G G AG
Sbjct: 303 --------HAHHKRPR-FDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAGTGGGGAG 353
Query: 174 GGGADDMGAGHHHGA 188
GG +G G GA
Sbjct: 354 GGCVAGVGVGAGAGA 368
Score = 33.5 bits (75), Expect = 0.30
Identities = 37/123 (30%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 60 SSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSG-GPGAVGGTSGKPALEDLYW 118
S+ +S S A S G G GGG GGG + G G +G G GA G S
Sbjct: 330 SAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKG 389
Query: 119 MSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGAD 178
G P L P + H A AA EA G G G G A
Sbjct: 390 SFGGVLQKFPGCGGLFPHPYTFPAAAAAFSLCH---KKEDAGAAAEALGGAGAGGAGAAP 446
Query: 179 DMG 181
G
Sbjct: 447 KAG 449
Score = 28.9 bits (63), Expect = 7.3
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 60 SSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSG 109
+S+ ++ + + + +GG G GGG G G G GA G G
Sbjct: 327 ASLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKG 376
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 62.8 bits (151), Expect = 5e-10
Identities = 73/252 (28%), Positives = 96/252 (38%), Gaps = 53/252 (21%)
Query: 74 GTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALNL 133
G GGGGG GGGGG GG G P +G KP++ G + H P AL
Sbjct: 69 GGGGGGGGGGGGGGGGGGGGDGSP-WSTSPLGQPDIKPSVVVQQGGRGDELH-GPGALQQ 126
Query: 134 TPEDAVEALIGSGH------------HGAHHGA-HHP------AAAAAYEAFRGPGFAGG 174
+ + H HH A HHP +AAAA G + G
Sbjct: 127 QHQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANHHPGPGAWRSAAAAAHLPPSMGASNG 186
Query: 175 G--------------GADDMGAG-HHHGAHHAAHH-HHAAHHHHHHHHHH---------- 208
G GA AG HHHG A HHA HH H H H H
Sbjct: 187 GLLYSQPSFTVNGMLGAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPPPQ 246
Query: 209 GGAGHGGGAGHHVRLEERFSDDQLVSMSVRELNRQLR-GFSKEEVIRLKQKRRTLKNRGY 267
G GH G E+ + D L + + R+++ GF++ +V TL +
Sbjct: 247 GPPGHPGAHHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADV---GLALGTLYGNVF 303
Query: 268 AQS--CRFKRVQ 277
+Q+ CRF+ +Q
Sbjct: 304 SQTTICRFEALQ 315
>gi|110624765 POU domain, class 3, transcription factor 1 [Homo
sapiens]
Length = 451
Score = 62.0 bits (149), Expect = 8e-10
Identities = 73/242 (30%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 73 PGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSG--------KPALEDLYWMSGYQ- 123
P GGGGG GG + G A G +G GG G A W G
Sbjct: 75 PTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTA 134
Query: 124 HHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAG-----GGGAD 178
HHL P A++ +P + GH G + A AAY G G AG GGGA
Sbjct: 135 HHLGP-AMSPSPGAS------GGHQPQPLGLY---AQAAYPGGGGGGLAGMLAAGGGGA- 183
Query: 179 DMGAGHHHGAHHAAHH---------HHAAHHHHHHHHH-----------HGGAGHGGGAG 218
G G HH H H H AH H H H H H GAG GG +
Sbjct: 184 --GPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSV 241
Query: 219 HHVRLEERFSDDQLVSMSVRELNRQLR-GFSKEEVIRLKQKRRTLKNRGYAQS--CRFKR 275
E+ S D L + + R+++ GF++ +V TL ++Q+ CRF+
Sbjct: 242 GEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADV---GLALGTLYGNVFSQTTICRFEA 298
Query: 276 VQ 277
+Q
Sbjct: 299 LQ 300
Score = 33.5 bits (75), Expect = 0.30
Identities = 42/135 (31%), Positives = 47/135 (34%), Gaps = 30/135 (22%)
Query: 43 HRLPPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPG 102
H L P S S P A PG GGGG A G AGG GG G
Sbjct: 135 HHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLA----GMLAAGG------GGAG 184
Query: 103 AVGGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAA 162
P L G++ L P +P + G HG HG H A
Sbjct: 185 --------PGLHHALHEDGHEAQLEP-----SPPPHL------GAHGHAHGHAHAGGLHA 225
Query: 163 YEAFRGPGFAGGGGA 177
A PG AGGGG+
Sbjct: 226 AAAHLHPG-AGGGGS 239
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 61.2 bits (147), Expect = 1e-09
Identities = 57/190 (30%), Positives = 65/190 (34%), Gaps = 43/190 (22%)
Query: 63 PSSPSFCAPSPGTGGGG---GAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLY-- 117
P P F G GGG G GG GG GG P G G +G +SG E
Sbjct: 717 PPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGG 776
Query: 118 WMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHG---------AHHP--------AAA 160
SG++ H P ++ G G H H G H P A
Sbjct: 777 MGSGHRPHEGPGG----------SMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAG 826
Query: 161 AAYEAFRGPGFA-GGGGADDMGAGHHHGAHHAAHHH----HAAHHHH----HHHHHHGGA 211
+ GPG + GG G G HG H H H H H H H H G
Sbjct: 827 GGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGP 886
Query: 212 GHG--GGAGH 219
GHG G GH
Sbjct: 887 GHGGGGHRGH 896
Score = 58.9 bits (141), Expect = 7e-09
Identities = 58/190 (30%), Positives = 64/190 (33%), Gaps = 25/190 (13%)
Query: 48 GSLSSTPLSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQ----AGGAPGPPSG---- 99
G P P S P G GG GG GGG + GG G SG
Sbjct: 711 GGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPH 770
Query: 100 -GPGAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPA 158
GPG G+ +P M G H E P + GSGH
Sbjct: 771 EGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEG----PGGGISG--GSGHRPHEGPGGGMG 824
Query: 159 AAAAYEAFRGPGFA-GGGGADDMGAGHHHGAHHAAHHH----HAAHHHH----HHHHHHG 209
A + GPG + GG G G HG H H H H H H H H
Sbjct: 825 AGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHD 884
Query: 210 GAGHGGGAGH 219
G GHGGG GH
Sbjct: 885 GPGHGGG-GH 893
Score = 55.1 bits (131), Expect = 9e-08
Identities = 49/161 (30%), Positives = 54/161 (33%), Gaps = 40/161 (24%)
Query: 71 PSPGTGGGGGAGG----GGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHL 126
P G GGG G+G G G S GG P GPG GG SG SG++ H
Sbjct: 769 PHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPG--GGISGG---------SGHRPHE 817
Query: 127 NPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAA----AAYEAFRGPGFAGGGGADDMGA 182
P G G G H P + + GPG G G
Sbjct: 818 GPGG-------------GMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGG-----PHGH 859
Query: 183 GHHHGAHHAAHHHHAAHHHHHHHHH---HGGAGHGGGAGHH 220
H H H H H H H HGG GH G G H
Sbjct: 860 RPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDGGH 900
Score = 39.3 bits (90), Expect = 0.005
Identities = 47/193 (24%), Positives = 53/193 (27%), Gaps = 37/193 (19%)
Query: 36 PEAERFCHRLPPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGG--- 92
P + PPG P P P P P GG G G GG
Sbjct: 634 PGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMR 693
Query: 93 -----APGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGH 147
PGP G G GG P G + P P ++G G
Sbjct: 694 GGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG---MVGGGG 750
Query: 148 HGAHHGAHHPAAAAAYEAFRGPGFAGGGGADDMGAGHHHGAHHAAHHHHAAHHHHHHHHH 207
H H G P + P GGG MG+GH H
Sbjct: 751 HRPHEG---PGGGMGNSSGHRPHEGPGGG---MGSGHRP--------------------H 784
Query: 208 HGGAGHGGGAGHH 220
G G GG G H
Sbjct: 785 EGPGGSMGGGGGH 797
Score = 33.5 bits (75), Expect = 0.30
Identities = 49/201 (24%), Positives = 60/201 (29%), Gaps = 36/201 (17%)
Query: 49 SLSSTPLSTPCSSVPSSPSFC-------------APSPGTGGGGGAGGGGGSSQAGGAPG 95
S+ +P S P + P + P P G G GG PG
Sbjct: 587 SIMGSPNSHPSEELLKQPDYSDKIKQMLVPHGLLGPGPIANGFPPGGPGGPKGMQHFPPG 646
Query: 96 PPSGGPGAVGGTSG-----------KPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIG 144
P PG GG G P D +W G + + P G
Sbjct: 647 PGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFW-DGPGDPMRGGPMRGGPGPGP----G 701
Query: 145 SGH--HGAHHGAHHPAAAAAYEAFRGPGFAGGG---GADDMGAGHHHGAHHAAHH-HHAA 198
H G G P + RG G +GGG G G G G H H
Sbjct: 702 PYHRGRGGRGGNEPPPPPPPFRGARG-GRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGG 760
Query: 199 HHHHHHHHHHGGAGHGGGAGH 219
+ H H G G G G+GH
Sbjct: 761 MGNSSGHRPHEGPGGGMGSGH 781
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 58.5 bits (140), Expect = 9e-09
Identities = 74/287 (25%), Positives = 102/287 (35%), Gaps = 76/287 (26%)
Query: 50 LSSTPLSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSG 109
+++ P + ++ ++ + A SP +G G G Q P PP GP GG
Sbjct: 98 VTALPHAAAAAAAAAAAAVEASSPWSGSA--VGMAGSPQQPPQPPPPPPQGPDVKGGAGR 155
Query: 110 KPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRG- 168
+DL+ + HH P L P + GH G A AAAAA A
Sbjct: 156 ----DDLHAGTAL-HHRGPPHLGPPPPPPHQ-----GHPGGWGAAAAAAAAAAAAAAAAH 205
Query: 169 --------------------------------PGFAGGGGADDMGAG------------- 183
PG GGGG GA
Sbjct: 206 LPSMAGGQQPPPQSLLYSQPGGFTVNGMLSAPPGPGGGGGGAGGGAQSLVHPGLVRGDTP 265
Query: 184 ----HHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSD-DQLVSMSVR 238
HHH HH AH H HH HHGG GGGAG + + SD D S +
Sbjct: 266 ELAEHHHHHHHHAHPHPPHPHHAQGPPHHGGG--GGGAGPGLNSHDPHSDEDTPTSDDLE 323
Query: 239 ELNRQLR------GFSKEEVIRLKQKRRTLKNRGYAQS--CRFKRVQ 277
+ +Q + GF++ +V TL ++Q+ CRF+ +Q
Sbjct: 324 QFAKQFKQRRIKLGFTQADV---GLALGTLYGNVFSQTTICRFEALQ 367
Score = 48.9 bits (115), Expect = 7e-06
Identities = 53/182 (29%), Positives = 61/182 (33%), Gaps = 33/182 (18%)
Query: 61 SVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMS 120
S+ S + A G GGGGG GGG G G PG + GA G + +M
Sbjct: 20 SIVHSDAAGAGGGGGGGGGGGGGGAGGGGGGMQPGSAAVTSGAYRGDPSSVKMVQSDFMQ 79
Query: 121 GYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAF-------------- 166
G N + V AL H A A AAAAA EA
Sbjct: 80 GAMAASNGGHMLSHAHQWVTAL----PHAA--AAAAAAAAAAVEASSPWSGSAVGMAGSP 133
Query: 167 -----------RGPGFAGGGGADDMGAGHHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGG 215
+GP GG G DD+ AG HH H H H GG G
Sbjct: 134 QQPPQPPPPPPQGPDVKGGAGRDDLHAG--TALHHRGPPHLGPPPPPPHQGHPGGWGAAA 191
Query: 216 GA 217
A
Sbjct: 192 AA 193
>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
Length = 354
Score = 56.6 bits (135), Expect = 3e-08
Identities = 65/258 (25%), Positives = 87/258 (33%), Gaps = 59/258 (22%)
Query: 1 MAAELAMGAELPSSPLAIEYVNDFDLMKFE------VKKEPPEAERFCHRLPPGSLSSTP 54
M E+A+ LP S + + + N + + K P + + R GS SS
Sbjct: 67 MREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSGTKSRPAKKKSSPVRESSGSESSGQ 126
Query: 55 LSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALE 114
+ P S +S S A S A G G G P A + PA
Sbjct: 127 FTPPAVSSSASSSSSASSSSANPAAAAAAGLG------------GNPVAAASSLSTPAAS 174
Query: 115 DLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGG 174
++ + P ++++ A + GA AAA+Y G G + G
Sbjct: 175 SIWSPASISPGSAPASVSVPEPLAAPSNTSCMQRSVAAGA--ATAAASYPMSYGQGGSYG 232
Query: 175 -----------GGADDMGA-----GHHH-------------GAHHAAHHHHA-------- 197
GG D HHH G HH HH HA
Sbjct: 233 QGYPTPSSSYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHH--HHPHAHHPLSQSS 290
Query: 198 AHHHHHHHHHHGGAGHGG 215
HHHHHHHHHH G G G
Sbjct: 291 GHHHHHHHHHHQGYGGSG 308
Score = 32.3 bits (72), Expect = 0.66
Identities = 35/138 (25%), Positives = 49/138 (35%), Gaps = 24/138 (17%)
Query: 45 LPPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGGGGAGG-----GGGSSQAGGAPGPPSG 99
+ PGS ++ + PS+ S S G A G G S G P P S
Sbjct: 182 ISPGSAPASVSVPEPLAAPSNTSCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPTPSSS 241
Query: 100 GPGAVGGTSGKPALEDLYW-----------MSGYQHHLNPEALNLTPEDAVEALIGSGHH 148
G V +S + + M+G+ HH +P A + + SGHH
Sbjct: 242 YFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHH-HPHAHHPLSQS-------SGHH 293
Query: 149 GAHHGAHHPAAAAAYEAF 166
HH HH + AF
Sbjct: 294 HHHHHHHHQGYGGSGLAF 311
>gi|122937233 discs, large (Drosophila) homolog-associated protein 3
[Homo sapiens]
Length = 979
Score = 55.5 bits (132), Expect = 7e-08
Identities = 55/200 (27%), Positives = 63/200 (31%), Gaps = 57/200 (28%)
Query: 64 SSPSFCAPSPGTG--------------------GGGGAGGGGGSS---QAGGAPGPPSGG 100
+ P FCAP G G G GAG GGGSS + GP
Sbjct: 43 TEPRFCAPRAGLGHISPEGPLSLSEGPSVGPEGGPAGAGVGGGSSTFPRMYPGQGPFDTC 102
Query: 101 PGAVGGTSGK------PALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSG-------- 146
VG GK P L D + Q + + + P A G G
Sbjct: 103 EDCVGHPQGKGAPRLPPTLLDQFEK---QLPVQQDGFHTLPYQRGPAGAGPGPAPGTGTA 159
Query: 147 -----------HHGAHH-----GAHHPAAAAAYEAFRGPGFAG-GGGADDMGAGHHHGAH 189
H H H A + GP G GG D G G
Sbjct: 160 PEPRSESPSRIRHLVHSVQKLFAKSHSLEAPGKRDYNGPKAEGRGGSGGDSYPGPGSGGP 219
Query: 190 HAAHHHHAAHHHHHHHHHHG 209
H +HHHH HHHHHH HG
Sbjct: 220 HTSHHHHHHHHHHHHQSRHG 239
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 53.9 bits (128), Expect = 2e-07
Identities = 51/181 (28%), Positives = 65/181 (35%), Gaps = 54/181 (29%)
Query: 51 SSTPLSTPCSSVPSS-PSFCAPSPGTGGG-----GGAGGGGGSSQAGGAPGPPSGGPGAV 104
+S+P+ P + V S P G+G G GGAG G QA P G GA
Sbjct: 183 ASSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAGGAGAHPGWPQASADSPPYGSGGGAA 242
Query: 105 GGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGA---HHPAAAA 161
GG + P G+G AH A + P+
Sbjct: 243 GGGAAGPG-------------------------------GAGSAAAHVSARFPYSPSPPM 271
Query: 162 AYEAFRGPG---FAGGGGADDMGAG-----------HHHGAHHAAHHHHAAHHHHHHHHH 207
A A R PG AG GGA + G + + AA + +HHHHHHHH
Sbjct: 272 ANGAAREPGGYAAAGSGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGTYHHHHHHHH 331
Query: 208 H 208
H
Sbjct: 332 H 332
Score = 52.0 bits (123), Expect = 8e-07
Identities = 43/144 (29%), Positives = 50/144 (34%), Gaps = 33/144 (22%)
Query: 63 PSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGY 122
P P A SP G GGGA GGG + GPG G + + Y S
Sbjct: 223 PGWPQASADSPPYGSGGGAAGGG------------AAGPGGAGSAAAHVSARFPYSPS-- 268
Query: 123 QHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGADDMGA 182
P A E A GSG G G AA R P ++ A +
Sbjct: 269 ----PPMANGAAREPGGYAAAGSGGAGGVSGGGSSLAAM---GGREPQYSSLSAARPLNG 321
Query: 183 GHHHGAHHAAHHHHAAHHHHHHHH 206
+HH HHHHHHHH
Sbjct: 322 TYHH------------HHHHHHHH 333
Score = 35.0 bits (79), Expect = 0.10
Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 29/106 (27%)
Query: 58 PCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLY 117
P S P + A PG G+GG GG SGG ++ G+
Sbjct: 264 PYSPSPPMANGAAREPGGYAAAGSGGAGG----------VSGGGSSLAAMGGR------- 306
Query: 118 WMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAY 163
P+ +L+ A L G+ HH HH HHP+ + Y
Sbjct: 307 ---------EPQYSSLS---AARPLNGTYHHHHHHHHHHPSPYSPY 340
Score = 32.0 bits (71), Expect = 0.86
Identities = 52/217 (23%), Positives = 65/217 (29%), Gaps = 55/217 (25%)
Query: 56 STPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPS----------------- 98
STP S + SS S C+ G GG + G A GPP+
Sbjct: 33 STPPSPISSSSSSCSRGGERGPGGASNCGTPQLDTEAAAGPPARSLLLSSYASHPFGAPH 92
Query: 99 --GGPGAVGGTSGKPALEDLYWMSGYQH--------------HLNPEALNLTPEDAVEAL 142
PG G + EDL + L+P A PE+ + L
Sbjct: 93 GPSAPGVAGPGGNLSSWEDLLLFTDLDQAATASKLLWSSRGAKLSPFAPE-QPEEMYQTL 151
Query: 143 IG------SGHHGAHHGAHHPAAAAAYEAFRG---------------PGFAGGGGADDMG 181
+ + GA G H AAAAA A PG G
Sbjct: 152 AALSSQGPAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLPYHLQGSGSG 211
Query: 182 AGHHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAG 218
+H G A A + GGA GG AG
Sbjct: 212 PANHAGGAGAHPGWPQASADSPPYGSGGGAAGGGAAG 248
Score = 29.3 bits (64), Expect = 5.6
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 11/37 (29%)
Query: 319 GRGGPGSAGGAG------FPREPSPPQAG-----PGG 344
G GPG AG A FP PSPP A PGG
Sbjct: 245 GAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGG 281
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 52.4 bits (124), Expect = 6e-07
Identities = 60/195 (30%), Positives = 66/195 (33%), Gaps = 46/195 (23%)
Query: 35 PPEAERFCHRLPPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAP 94
PP ER P S SS+PL + P P PG GGGG AG GGG G P
Sbjct: 48 PPPRER------PASSSSSPLGCFEPADPEGAGLLLPPPGGGGGGSAGSGGGGGGGVGVP 101
Query: 95 GPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGA 154
G G G G P+L L P L + A GS + G
Sbjct: 102 GLLVGS----AGVGGDPSLSSL-----------PAGAALCLKYGESASRGSVAESS-GGE 145
Query: 155 HHP-----------AAAAAYEAFRGPGFAGGGGADDMGAGHHHGAHHAAHHHHAAHHHHH 203
P A + PG AGGGGA AA AH H
Sbjct: 146 QSPDDDSDGRCELVLRAGVADPRASPG-AGGGGA------------KAAEGCSNAHLHGG 192
Query: 204 HHHHHGGAGHGGGAG 218
GG G GGG G
Sbjct: 193 ASVPPGGLGGGGGGG 207
Score = 43.9 bits (102), Expect = 2e-04
Identities = 22/56 (39%), Positives = 26/56 (46%)
Query: 59 CSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALE 114
CS+ P G GGGGG G GSS GG G SGG + +S K + E
Sbjct: 184 CSNAHLHGGASVPPGGLGGGGGGGSSSGSSGGGGGSGSGSGGSSSSSSSSSKKSKE 239
Score = 32.7 bits (73), Expect = 0.50
Identities = 19/39 (48%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 72 SPGTGGGGGAGGGGGSSQA--GGAPGPPSGGPGAVGGTS 108
SPG GGGG G S+ GGA PP G G GG S
Sbjct: 170 SPGAGGGGAKAAEGCSNAHLHGGASVPPGGLGGGGGGGS 208
Score = 29.6 bits (65), Expect = 4.3
Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Query: 71 PSPGTG-GGGGAGGGGGSSQA---GGAPGPPSG-GPGAVGGTS 108
P G GGGGA G S A GGA PP G G G GG+S
Sbjct: 167 PRASPGAGGGGAKAAEGCSNAHLHGGASVPPGGLGGGGGGGSS 209
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 52.4 bits (124), Expect = 6e-07
Identities = 44/142 (30%), Positives = 52/142 (36%), Gaps = 38/142 (26%)
Query: 47 PGSLSSTPLSTPCSSVPSS-----PSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGP 101
PGS+ PL P+S P + P G GGGGG GGGGGS GG G +GG
Sbjct: 219 PGSMD--PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA 276
Query: 102 GAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAA 161
GA G + A A A G G G + G ++A
Sbjct: 277 GA-GAVAAAAA-------------------------AAAAAAGGGGGGGYGG-----SSA 305
Query: 162 AYEAFRGPGFAGGGGADDMGAG 183
Y P GGG G G
Sbjct: 306 GYGVLSSPRQQGGGMMMGPGGG 327
Score = 46.6 bits (109), Expect = 3e-05
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 185 HHGAHHAAHHHHAAHHHHHHH 205
HH HHA HHHH AHH HHHH
Sbjct: 26 HHHHHHAHHHHHHAHHLHHHH 46
Score = 45.8 bits (107), Expect = 6e-05
Identities = 18/25 (72%), Positives = 18/25 (72%), Gaps = 4/25 (16%)
Query: 184 HHHGAHHAAHHHHAAHHHHHHHHHH 208
HHH HH AHHHH HH HH HHHH
Sbjct: 26 HHH--HHHAHHHH--HHAHHLHHHH 46
Score = 42.4 bits (98), Expect = 6e-04
Identities = 17/25 (68%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Query: 186 HGAHHAAHHHHAAHHHHH--HHHHH 208
H HH HHHHA HHHHH H HHH
Sbjct: 23 HQQHH--HHHHAHHHHHHAHHLHHH 45
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 187 GAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSDDQLVSMSVRELNRQ 243
G AA H HHHHH HHHH A H HH L+++ + Q ++ +Q
Sbjct: 15 GEAPAAPPHQQHHHHHHAHHHHHHAHH---LHHHHALQQQLNQFQQQQQQQQQQQQQ 68
Score = 38.5 bits (88), Expect = 0.009
Identities = 51/176 (28%), Positives = 62/176 (35%), Gaps = 36/176 (20%)
Query: 70 APSPGTGGGGGAGGGGGSSQAGG---APGPP----SGGPGAVGGTSGKPALEDLYWMSGY 122
AP PG GG S AGG PGPP G G+PA G
Sbjct: 89 APQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPA-------GGR 141
Query: 123 QHHLNPEALNLTPEDAVEALIGSGHHGA------HHGAHHPAAAAAYEAFRGPGFAGGGG 176
H AL T + V G G A ++G+ PA+ GP F GG
Sbjct: 142 YEHPGLGALG-TQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP-GGRAGPCFDQHGG 199
Query: 177 ADDMGAGHHHGAHHAA----------HHHHAAHHHHHHHHHHG----GAGHGGGAG 218
G G H A AA + H + + +H+ G GAG GGG G
Sbjct: 200 QQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
Score = 37.4 bits (85), Expect = 0.020
Identities = 38/148 (25%), Positives = 54/148 (36%), Gaps = 16/148 (10%)
Query: 61 SVPSSPSFCAPSPGTGGGGGAGGGGGS--------SQAGG-APGPPSGGPGAVGGTSGKP 111
+V ++ + A + G GGGGG GG Q GG GP GG ++ +
Sbjct: 280 AVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS 339
Query: 112 ALEDLYWMSGYQHHLNPEALNL-----TPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAF 166
A +G H + L +P + + GS + A P +
Sbjct: 340 AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA 399
Query: 167 RGPGFAGGG--GADDMGAGHHHGAHHAA 192
G A GG A MG G GA +AA
Sbjct: 400 AAAGAAAGGQQAAAGMGLGKDMGAQYAA 427
Score = 33.9 bits (76), Expect = 0.23
Identities = 36/143 (25%), Positives = 44/143 (30%), Gaps = 31/143 (21%)
Query: 76 GGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTP 135
GGGGG + G+ P SGGPG G P + G Q ++
Sbjct: 161 GGGGGPAAVPEFNNYYGSAAPASGGPGGRAG----PCFD----QHGGQQSPGMGMMHSAS 212
Query: 136 EDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGADDMGAGHHHGAHHAAHHH 195
A A H + + Y + PG GGGG G G
Sbjct: 213 AAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG------------ 260
Query: 196 HAAHHHHHHHHHHGGAGHGGGAG 218
GG G GGGAG
Sbjct: 261 -----------GSGGGGGGGGAG 272
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 52.4 bits (124), Expect = 6e-07
Identities = 19/33 (57%), Positives = 20/33 (60%)
Query: 173 GGGGADDMGAGHHHGAHHAAHHHHAAHHHHHHH 205
G G + HHH HH HHH AAHHHHHHH
Sbjct: 129 GAGPGGHLHPHHHHHPHHHHHHHAAAHHHHHHH 161
Score = 45.4 bits (106), Expect = 8e-05
Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 176 GADDMGAGHHHGAHHAAHHHHAAHHHHHHH---HHH 208
G+ G G H HHHH HHHHHHH HHH
Sbjct: 122 GSTKSAPGAGPGGHLHPHHHHHPHHHHHHHAAAHHH 157
Score = 40.4 bits (93), Expect = 0.002
Identities = 15/27 (55%), Positives = 15/27 (55%)
Query: 187 GAHHAAHHHHAAHHHHHHHHHHGGAGH 213
GA H H HHH HHHHHH A H
Sbjct: 129 GAGPGGHLHPHHHHHPHHHHHHHAAAH 155
Score = 38.9 bits (89), Expect = 0.007
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
Query: 194 HHHAAHHHHHHHHHHGGAGHGGGAGHH 220
H H HHHH HHHHH H A HH
Sbjct: 135 HLHPHHHHHPHHHHH----HHAAAHHH 157
Score = 34.3 bits (77), Expect = 0.17
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 182 AGHHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHH 220
AG A A H HHHHH HHH H A HH
Sbjct: 121 AGSTKSAPGAGPGGHLHPHHHHHPHHH---HHHHAAAHH 156
Score = 32.3 bits (72), Expect = 0.66
Identities = 11/22 (50%), Positives = 11/22 (50%)
Query: 199 HHHHHHHHHHGGAGHGGGAGHH 220
H HHHHH HH H HH
Sbjct: 137 HPHHHHHPHHHHHHHAAAHHHH 158
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 52.4 bits (124), Expect = 6e-07
Identities = 44/142 (30%), Positives = 52/142 (36%), Gaps = 38/142 (26%)
Query: 47 PGSLSSTPLSTPCSSVPSS-----PSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGP 101
PGS+ PL P+S P + P G GGGGG GGGGGS GG G +GG
Sbjct: 219 PGSMD--PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA 276
Query: 102 GAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAA 161
GA G + A A A G G G + G ++A
Sbjct: 277 GA-GAVAAAAA-------------------------AAAAAAGGGGGGGYGG-----SSA 305
Query: 162 AYEAFRGPGFAGGGGADDMGAG 183
Y P GGG G G
Sbjct: 306 GYGVLSSPRQQGGGMMMGPGGG 327
Score = 46.6 bits (109), Expect = 3e-05
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 185 HHGAHHAAHHHHAAHHHHHHH 205
HH HHA HHHH AHH HHHH
Sbjct: 26 HHHHHHAHHHHHHAHHLHHHH 46
Score = 45.8 bits (107), Expect = 6e-05
Identities = 18/25 (72%), Positives = 18/25 (72%), Gaps = 4/25 (16%)
Query: 184 HHHGAHHAAHHHHAAHHHHHHHHHH 208
HHH HH AHHHH HH HH HHHH
Sbjct: 26 HHH--HHHAHHHH--HHAHHLHHHH 46
Score = 42.4 bits (98), Expect = 6e-04
Identities = 17/25 (68%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Query: 186 HGAHHAAHHHHAAHHHHH--HHHHH 208
H HH HHHHA HHHHH H HHH
Sbjct: 23 HQQHH--HHHHAHHHHHHAHHLHHH 45
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 187 GAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSDDQLVSMSVRELNRQ 243
G AA H HHHHH HHHH A H HH L+++ + Q ++ +Q
Sbjct: 15 GEAPAAPPHQQHHHHHHAHHHHHHAHH---LHHHHALQQQLNQFQQQQQQQQQQQQQ 68
Score = 38.5 bits (88), Expect = 0.009
Identities = 51/176 (28%), Positives = 62/176 (35%), Gaps = 36/176 (20%)
Query: 70 APSPGTGGGGGAGGGGGSSQAGG---APGPP----SGGPGAVGGTSGKPALEDLYWMSGY 122
AP PG GG S AGG PGPP G G+PA G
Sbjct: 89 APQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPA-------GGR 141
Query: 123 QHHLNPEALNLTPEDAVEALIGSGHHGA------HHGAHHPAAAAAYEAFRGPGFAGGGG 176
H AL T + V G G A ++G+ PA+ GP F GG
Sbjct: 142 YEHPGLGALG-TQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP-GGRAGPCFDQHGG 199
Query: 177 ADDMGAGHHHGAHHAA----------HHHHAAHHHHHHHHHHG----GAGHGGGAG 218
G G H A AA + H + + +H+ G GAG GGG G
Sbjct: 200 QQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
Score = 37.4 bits (85), Expect = 0.020
Identities = 38/148 (25%), Positives = 54/148 (36%), Gaps = 16/148 (10%)
Query: 61 SVPSSPSFCAPSPGTGGGGGAGGGGGS--------SQAGG-APGPPSGGPGAVGGTSGKP 111
+V ++ + A + G GGGGG GG Q GG GP GG ++ +
Sbjct: 280 AVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS 339
Query: 112 ALEDLYWMSGYQHHLNPEALNL-----TPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAF 166
A +G H + L +P + + GS + A P +
Sbjct: 340 AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA 399
Query: 167 RGPGFAGGG--GADDMGAGHHHGAHHAA 192
G A GG A MG G GA +AA
Sbjct: 400 AAAGAAAGGQQAAAGMGLGKDMGAQYAA 427
Score = 33.9 bits (76), Expect = 0.23
Identities = 36/143 (25%), Positives = 44/143 (30%), Gaps = 31/143 (21%)
Query: 76 GGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTP 135
GGGGG + G+ P SGGPG G P + G Q ++
Sbjct: 161 GGGGGPAAVPEFNNYYGSAAPASGGPGGRAG----PCFD----QHGGQQSPGMGMMHSAS 212
Query: 136 EDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGADDMGAGHHHGAHHAAHHH 195
A A H + + Y + PG GGGG G G
Sbjct: 213 AAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG------------ 260
Query: 196 HAAHHHHHHHHHHGGAGHGGGAG 218
GG G GGGAG
Sbjct: 261 -----------GSGGGGGGGGAG 272
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 52.4 bits (124), Expect = 6e-07
Identities = 44/142 (30%), Positives = 52/142 (36%), Gaps = 38/142 (26%)
Query: 47 PGSLSSTPLSTPCSSVPSS-----PSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGP 101
PGS+ PL P+S P + P G GGGGG GGGGGS GG G +GG
Sbjct: 219 PGSMD--PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA 276
Query: 102 GAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAA 161
GA G + A A A G G G + G ++A
Sbjct: 277 GA-GAVAAAAA-------------------------AAAAAAGGGGGGGYGG-----SSA 305
Query: 162 AYEAFRGPGFAGGGGADDMGAG 183
Y P GGG G G
Sbjct: 306 GYGVLSSPRQQGGGMMMGPGGG 327
Score = 46.6 bits (109), Expect = 3e-05
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 185 HHGAHHAAHHHHAAHHHHHHH 205
HH HHA HHHH AHH HHHH
Sbjct: 26 HHHHHHAHHHHHHAHHLHHHH 46
Score = 45.8 bits (107), Expect = 6e-05
Identities = 18/25 (72%), Positives = 18/25 (72%), Gaps = 4/25 (16%)
Query: 184 HHHGAHHAAHHHHAAHHHHHHHHHH 208
HHH HH AHHHH HH HH HHHH
Sbjct: 26 HHH--HHHAHHHH--HHAHHLHHHH 46
Score = 42.4 bits (98), Expect = 6e-04
Identities = 17/25 (68%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Query: 186 HGAHHAAHHHHAAHHHHH--HHHHH 208
H HH HHHHA HHHHH H HHH
Sbjct: 23 HQQHH--HHHHAHHHHHHAHHLHHH 45
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 187 GAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSDDQLVSMSVRELNRQ 243
G AA H HHHHH HHHH A H HH L+++ + Q ++ +Q
Sbjct: 15 GEAPAAPPHQQHHHHHHAHHHHHHAHH---LHHHHALQQQLNQFQQQQQQQQQQQQQ 68
Score = 38.5 bits (88), Expect = 0.009
Identities = 51/176 (28%), Positives = 62/176 (35%), Gaps = 36/176 (20%)
Query: 70 APSPGTGGGGGAGGGGGSSQAGG---APGPP----SGGPGAVGGTSGKPALEDLYWMSGY 122
AP PG GG S AGG PGPP G G+PA G
Sbjct: 89 APQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPA-------GGR 141
Query: 123 QHHLNPEALNLTPEDAVEALIGSGHHGA------HHGAHHPAAAAAYEAFRGPGFAGGGG 176
H AL T + V G G A ++G+ PA+ GP F GG
Sbjct: 142 YEHPGLGALG-TQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP-GGRAGPCFDQHGG 199
Query: 177 ADDMGAGHHHGAHHAA----------HHHHAAHHHHHHHHHHG----GAGHGGGAG 218
G G H A AA + H + + +H+ G GAG GGG G
Sbjct: 200 QQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
Score = 37.4 bits (85), Expect = 0.020
Identities = 38/148 (25%), Positives = 54/148 (36%), Gaps = 16/148 (10%)
Query: 61 SVPSSPSFCAPSPGTGGGGGAGGGGGS--------SQAGG-APGPPSGGPGAVGGTSGKP 111
+V ++ + A + G GGGGG GG Q GG GP GG ++ +
Sbjct: 280 AVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS 339
Query: 112 ALEDLYWMSGYQHHLNPEALNL-----TPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAF 166
A +G H + L +P + + GS + A P +
Sbjct: 340 AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA 399
Query: 167 RGPGFAGGG--GADDMGAGHHHGAHHAA 192
G A GG A MG G GA +AA
Sbjct: 400 AAAGAAAGGQQAAAGMGLGKDMGAQYAA 427
Score = 33.9 bits (76), Expect = 0.23
Identities = 36/143 (25%), Positives = 44/143 (30%), Gaps = 31/143 (21%)
Query: 76 GGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTP 135
GGGGG + G+ P SGGPG G P + G Q ++
Sbjct: 161 GGGGGPAAVPEFNNYYGSAAPASGGPGGRAG----PCFD----QHGGQQSPGMGMMHSAS 212
Query: 136 EDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGADDMGAGHHHGAHHAAHHH 195
A A H + + Y + PG GGGG G G
Sbjct: 213 AAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG------------ 260
Query: 196 HAAHHHHHHHHHHGGAGHGGGAG 218
GG G GGGAG
Sbjct: 261 -----------GSGGGGGGGGAG 272
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 52.0 bits (123), Expect = 8e-07
Identities = 41/111 (36%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Query: 73 PGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALN 132
PG GGG G GGG G GG G P GG G GG + M H +P A
Sbjct: 147 PGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAA-- 204
Query: 133 LTPEDAVEALIGSGHHG-AHHGAHHPAAAAAYEAFRGPGFAGGGGADDMGA 182
A+ G H G AHH AAAAA A G A A +GA
Sbjct: 205 ---AAAMNMPSGLPHPGLVAAAAHHGAAAAAAAAAAGQVAAASAAAAVVGA 252
Score = 33.9 bits (76), Expect = 0.23
Identities = 10/10 (100%), Positives = 10/10 (100%)
Query: 198 AHHHHHHHHH 207
AHHHHHHHHH
Sbjct: 99 AHHHHHHHHH 108
Score = 33.1 bits (74), Expect = 0.39
Identities = 39/148 (26%), Positives = 41/148 (27%), Gaps = 63/148 (42%)
Query: 64 SSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQ 123
SSPS A G GG G A GGGG+ GPG GG G
Sbjct: 121 SSPSL-ALMAGAGGAGAAAGGGGAHD----------GPGGGGGPGG-------------- 155
Query: 124 HHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGGGADDMGAG 183
G G G GPG GGGG G G
Sbjct: 156 --------------------GGGPGG------------------GPGGGGGGGPGGGGGG 177
Query: 184 HHHGAHHAAHHHHAAHHHHHHHHHHGGA 211
G + H H H H H A
Sbjct: 178 PGGGLLGGSAHPHPHMHSLGHLSHPAAA 205
Score = 32.3 bits (72), Expect = 0.66
Identities = 9/9 (100%), Positives = 9/9 (100%)
Query: 200 HHHHHHHHH 208
HHHHHHHHH
Sbjct: 100 HHHHHHHHH 108
Score = 31.2 bits (69), Expect = 1.5
Identities = 32/118 (27%), Positives = 39/118 (33%), Gaps = 32/118 (27%)
Query: 112 ALEDLYWMSGYQHHLNPEA----LNLTPEDAVEALIGSGHHGAHHGAHHPAAAAA--YEA 165
A D+ G H P+A +N P + + + HH HH HH A +
Sbjct: 62 AAVDIAVSQGKSHPFKPDATYHTMNSVPCTSTSTVPLAHHHHHHH--HHQALEPGDLLDH 119
Query: 166 FRGPGFA-----GGGGADDMGAGHHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAG 218
P A GG GA G G H G GG G GGG G
Sbjct: 120 ISSPSLALMAGAGGAGAAAGGGGAHDGP-------------------GGGGGPGGGGG 158
Score = 30.8 bits (68), Expect = 1.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 201 HHHHHHHHGGAGHGGGAGHHV 221
HHHHHHHH A G H+
Sbjct: 100 HHHHHHHHHQALEPGDLLDHI 120
Score = 29.6 bits (65), Expect = 4.3
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 22/48 (45%)
Query: 192 AHHHHAAHHHHHHHHHHG--------------------GAGHGGGAGH 219
AHHHH HHHHH G GA GGG H
Sbjct: 99 AHHHH--HHHHHQALEPGDLLDHISSPSLALMAGAGGAGAAAGGGGAH 144
Score = 28.9 bits (63), Expect = 7.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 317 LAGRGGPGSAGGAGFPREPSPPQAGPGGAKG 347
+AG GG G+A G G + GPGG G
Sbjct: 128 MAGAGGAGAAAGGGGAHDGPGGGGGPGGGGG 158
>gi|4504809 jun B proto-oncogene [Homo sapiens]
Length = 347
Score = 51.6 bits (122), Expect = 1e-06
Identities = 70/288 (24%), Positives = 112/288 (38%), Gaps = 44/288 (15%)
Query: 31 VKKEPPEAERFCHRLPPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGG-GGAGGGGGSSQ 89
+K E ER G +++TP P F G+GGG GGAGGG Q
Sbjct: 80 LKLASSELERLIVPNSNGVITTTP-------TPPGQYFYPRGGGSGGGAGGAGGGVTEEQ 132
Query: 90 AGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHG 149
G A G AL+DL+ M+ H+ P ++L A G G
Sbjct: 133 EGFADGFVK-------------ALDDLHKMN----HVTPPNVSLGATGGPPA----GPGG 171
Query: 150 AHHGAHHPAAAAAYEAFRGPGFAGGGGADDMGAGHHHGAHHAAHHHHAAHHHHHHHHHHG 209
+ G P ++ + GG +G G + ++ HA H
Sbjct: 172 VYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSYPTTTISYLPHAPPFAGGHP---- 227
Query: 210 GAGHGGGAGHHVRLEERFSDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQ 269
A G G G EE + + S R+ + + E+ R+K +R+ L+NR A
Sbjct: 228 -AQLGLGRGASTFKEEPQTVPEARS---RDATPPVSPINMEDQERIKVERKRLRNRLAAT 283
Query: 270 SCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRLAKERDLYKEKYEKL 317
CR +++++ +L+ +V+ LK E L+ L +E+ +L
Sbjct: 284 KCRKRKLER-------IARLEDKVKTLKAENAGLSSTAGLLREQVAQL 324
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,542,367
Number of Sequences: 37866
Number of extensions: 1323254
Number of successful extensions: 33696
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 702
Number of HSP's that attempted gapping in prelim test: 11634
Number of HSP's gapped (non-prelim): 12358
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.