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Search of human proteins with 70995211
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
[Homo sapiens]
(328 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 639 0.0
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 100 2e-21
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 100 2e-21
gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 88 1e-17
gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 88 1e-17
gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 88 1e-17
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 81 1e-15
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 81 1e-15
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 81 1e-15
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 81 1e-15
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 80 2e-15
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 80 2e-15
gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 79 6e-15
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 77 2e-14
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 77 2e-14
gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo... 75 1e-13
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 72 5e-13
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof... 72 7e-13
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof... 72 7e-13
gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... 67 2e-11
gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [... 67 2e-11
gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Hom... 66 4e-11
gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isof... 61 2e-09
gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Hom... 55 7e-08
gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom... 54 1e-07
gi|189571693 potassium channel tetramerisation domain containing... 29 5.0
gi|189571691 potassium channel tetramerisation domain containing... 29 5.0
gi|18860857 menin isoform 1 [Homo sapiens] 29 6.6
gi|18860855 menin isoform 1 [Homo sapiens] 29 6.6
gi|18860851 menin isoform 1 [Homo sapiens] 29 6.6
>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
[Homo sapiens]
Length = 328
Score = 639 bits (1649), Expect = 0.0
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 1 MAAGIVASRRLRDLLTRRLTGSNYPGLSISLRLTGSSAQEEASGVALGEAPDHSYESLRV 60
MAAGIVASRRLRDLLTRRLTGSNYPGLSISLRLTGSSAQEEASGVALGEAPDHSYESLRV
Sbjct: 1 MAAGIVASRRLRDLLTRRLTGSNYPGLSISLRLTGSSAQEEASGVALGEAPDHSYESLRV 60
Query: 61 TSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDL 120
TSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDL
Sbjct: 61 TSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDL 120
Query: 121 MDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVT 180
MDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVT
Sbjct: 121 MDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVT 180
Query: 181 ACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGS 240
ACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGS
Sbjct: 181 ACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGS 240
Query: 241 GLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMS 300
GLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMS
Sbjct: 241 GLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMS 300
Query: 301 MLQTQDLVKSVQATTENKELKTVTFSKL 328
MLQTQDLVKSVQATTENKELKTVTFSKL
Sbjct: 301 MLQTQDLVKSVQATTENKELKTVTFSKL 328
>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
precursor [Homo sapiens]
Length = 290
Score = 100 bits (249), Expect = 2e-21
Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 15/250 (6%)
Query: 70 VQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQ 129
+QLNRP NA+ E+ + D A+V++G K F AG D+ +M + Q
Sbjct: 50 IQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQ 109
Query: 130 PKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQ 189
+++ + ++ + + KPVIAAV+G GGG +L CDI Y +
Sbjct: 110 DCYS-------------SKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGE 156
Query: 190 DAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPD 249
A F E+ +G G QRL + +G +SL E+ T ++ A +A +GLVS++ P
Sbjct: 157 KAQFAQPEILIGTIPGAGGTQRLTRAVG-KSLAMEMVLTGDRISAQDAKQAGLVSKICP- 214
Query: 250 KEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDLVK 309
E +++ A+ A +I+S S + V K ++ + + ++ E S T D +
Sbjct: 215 VETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKE 274
Query: 310 SVQATTENKE 319
+ A E ++
Sbjct: 275 GMTAFVEKRK 284
>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
precursor [Homo sapiens]
Length = 339
Score = 100 bits (248), Expect = 2e-21
Identities = 90/324 (27%), Positives = 138/324 (42%), Gaps = 35/324 (10%)
Query: 18 RLTGSNYPGLSISLRLTGSSAQEEASGV---------ALGEAPDHSYESLRVTSAQKHVL 68
RL + L LRL GS A A A G AP Y S T + V
Sbjct: 21 RLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGGPAPKRGYSSEMKTEDELRVR 80
Query: 69 HVQ----------LNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVI-SGAGKMFTAG 117
H++ +NR +N+++K + + + + + D R ++I S +F AG
Sbjct: 81 HLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAG 140
Query: 118 IDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVD 177
DL + A G V++I + DI P P IAA+ G +GGG++
Sbjct: 141 ADLKERAKMSSSEVGPFVSKIRAVINDIAN-----------LPVPTIAAIDGLALGGGLE 189
Query: 178 LVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEA 237
L ACDIR A A + E + + G QRLP+ IG SL EL F+AR + EA
Sbjct: 190 LALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIG-MSLAKELIFSARVLDGKEA 248
Query: 238 LGSGLVSRVF---PDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYV 294
GL+S V + + AL LA E + PVA++ K+ + + + L
Sbjct: 249 KAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIE 308
Query: 295 ASWNMSMLQTQDLVKSVQATTENK 318
+ + T+D ++ + A E +
Sbjct: 309 EACYAQTIPTKDRLEGLLAFKEKR 332
>gi|221307494 chromodomain protein, Y chromosome-like isoform a
[Homo sapiens]
Length = 544
Score = 87.8 bits (216), Expect = 1e-17
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 60 VTSAQKHVLHVQLN-RPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGI 118
V Q H+ L+ + ++ N++N RE+ + + D D + V++S G +F G+
Sbjct: 291 VVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAAD-DSKLVLLSAVGSVFCCGL 349
Query: 119 DLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDL 178
D + + DD R S + + I + TF + KP+I AV+G IG G +
Sbjct: 350 DFIYFIRRLT----DDRKRESTKMAEAIRNFVNTFIQFK---KPIIVAVNGPAIGLGASI 402
Query: 179 VTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEAL 238
+ CD+ + + A+FQ G + D + PK++G S NE+ + RK+ A EA
Sbjct: 403 LPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGAS-ANEMLLSGRKLTAQEAC 461
Query: 239 GSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTK 276
G GLVS+VF + + + E++S +PV ++ +K
Sbjct: 462 GKGLVSQVFWPGTFTQEVMVRI-KELASCNPVVLEESK 498
>gi|221136756 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 87.8 bits (216), Expect = 1e-17
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 60 VTSAQKHVLHVQLN-RPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGI 118
V Q H+ L+ + ++ N++N RE+ + + D D + V++S G +F G+
Sbjct: 159 VVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAAD-DSKLVLLSAVGSVFCCGL 217
Query: 119 DLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDL 178
D + + DD R S + + I + TF + KP+I AV+G IG G +
Sbjct: 218 DFIYFIRRLT----DDRKRESTKMAEAIRNFVNTFIQFK---KPIIVAVNGPAIGLGASI 270
Query: 179 VTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEAL 238
+ CD+ + + A+FQ G + D + PK++G S NE+ + RK+ A EA
Sbjct: 271 LPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGAS-ANEMLLSGRKLTAQEAC 329
Query: 239 GSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTK 276
G GLVS+VF + + + E++S +PV ++ +K
Sbjct: 330 GKGLVSQVFWPGTFTQEVMVRI-KELASCNPVVLEESK 366
>gi|221136753 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 87.8 bits (216), Expect = 1e-17
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 60 VTSAQKHVLHVQLN-RPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGI 118
V Q H+ L+ + ++ N++N RE+ + + D D + V++S G +F G+
Sbjct: 159 VVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAAD-DSKLVLLSAVGSVFCCGL 217
Query: 119 DLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDL 178
D + + DD R S + + I + TF + KP+I AV+G IG G +
Sbjct: 218 DFIYFIRRLT----DDRKRESTKMAEAIRNFVNTFIQFK---KPIIVAVNGPAIGLGASI 270
Query: 179 VTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEAL 238
+ CD+ + + A+FQ G + D + PK++G S NE+ + RK+ A EA
Sbjct: 271 LPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGAS-ANEMLLSGRKLTAQEAC 329
Query: 239 GSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTK 276
G GLVS+VF + + + E++S +PV ++ +K
Sbjct: 330 GKGLVSQVFWPGTFTQEVMVRI-KELASCNPVVLEESK 366
>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
[Homo sapiens]
Length = 554
Score = 81.3 bits (199), Expect = 1e-15
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Query: 54 SYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKM 113
+Y + V V R ++NA+N +E+V N + D D + V+ S AG +
Sbjct: 282 TYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAAD-DSKLVLFSAAGSV 340
Query: 114 FTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIG 173
F G+D + + S + D I + TF + KP++ +V+G IG
Sbjct: 341 FCCGLDFGYFVKHLRNNRNT----ASLEMVDTIKNFVNTFIQFK---KPIVVSVNGPAIG 393
Query: 174 GGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMM 233
G ++ CD+ + + A+FQ G + D + PK++G S NE+ RK+
Sbjct: 394 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKAS-ANEMLIAGRKLT 452
Query: 234 ADEALGSGLVSRVFP----DKEVMLDAALALAAEISSKSPVAVQSTK 276
A EA GLVS+VF +EVM+ E++S +P+ ++ K
Sbjct: 453 AREACAKGLVSQVFLTGTFTQEVMIQ-----IKELASYNPIVLEECK 494
>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
a [Homo sapiens]
Length = 540
Score = 81.3 bits (199), Expect = 1e-15
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Query: 54 SYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKM 113
+Y + V V R ++NA+N +E+V N + D D + V+ S AG +
Sbjct: 282 TYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAAD-DSKLVLFSAAGSV 340
Query: 114 FTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIG 173
F G+D + + S + D I + TF + KP++ +V+G IG
Sbjct: 341 FCCGLDFGYFVKHLRNNRNT----ASLEMVDTIKNFVNTFIQFK---KPIVVSVNGPAIG 393
Query: 174 GGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMM 233
G ++ CD+ + + A+FQ G + D + PK++G S NE+ RK+
Sbjct: 394 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKAS-ANEMLIAGRKLT 452
Query: 234 ADEALGSGLVSRVFP----DKEVMLDAALALAAEISSKSPVAVQSTK 276
A EA GLVS+VF +EVM+ E++S +P+ ++ K
Sbjct: 453 AREACAKGLVSQVFLTGTFTQEVMIQ-----IKELASYNPIVLEECK 494
>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
sapiens]
Length = 554
Score = 81.3 bits (199), Expect = 1e-15
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Query: 54 SYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKM 113
+Y + V V R ++NA+N +E+V N + D D + V+ S AG +
Sbjct: 282 TYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAAD-DSKLVLFSAAGSV 340
Query: 114 FTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIG 173
F G+D + + S + D I + TF + KP++ +V+G IG
Sbjct: 341 FCCGLDFGYFVKHLRNNRNT----ASLEMVDTIKNFVNTFIQFK---KPIVVSVNGPAIG 393
Query: 174 GGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMM 233
G ++ CD+ + + A+FQ G + D + PK++G S NE+ RK+
Sbjct: 394 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKAS-ANEMLIAGRKLT 452
Query: 234 ADEALGSGLVSRVFP----DKEVMLDAALALAAEISSKSPVAVQSTK 276
A EA GLVS+VF +EVM+ E++S +P+ ++ K
Sbjct: 453 AREACAKGLVSQVFLTGTFTQEVMIQ-----IKELASYNPIVLEECK 494
>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
sapiens]
Length = 540
Score = 81.3 bits (199), Expect = 1e-15
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Query: 54 SYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKM 113
+Y + V V R ++NA+N +E+V N + D D + V+ S AG +
Sbjct: 282 TYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAAD-DSKLVLFSAAGSV 340
Query: 114 FTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIG 173
F G+D + + S + D I + TF + KP++ +V+G IG
Sbjct: 341 FCCGLDFGYFVKHLRNNRNT----ASLEMVDTIKNFVNTFIQFK---KPIVVSVNGPAIG 393
Query: 174 GGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMM 233
G ++ CD+ + + A+FQ G + D + PK++G S NE+ RK+
Sbjct: 394 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKAS-ANEMLIAGRKLT 452
Query: 234 ADEALGSGLVSRVFP----DKEVMLDAALALAAEISSKSPVAVQSTK 276
A EA GLVS+VF +EVM+ E++S +P+ ++ K
Sbjct: 453 AREACAKGLVSQVFLTGTFTQEVMIQ-----IKELASYNPIVLEECK 494
>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
Length = 541
Score = 80.5 bits (197), Expect = 2e-15
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
Query: 54 SYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKM 113
+Y + V V R ++NA+N +EMV N + D D + V+ S AG +
Sbjct: 283 TYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAAD-DSKLVLFSAAGSV 341
Query: 114 FTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIG 173
F G+D ++ +D S + D I + TF + KP++ +V+G IG
Sbjct: 342 FCCGLDF----GYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFK---KPIVVSVNGPAIG 394
Query: 174 GGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMM 233
G ++ CD+ + + A+FQ G + D + PK++G S NE+ RK+
Sbjct: 395 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKAS-ANEMLIAGRKLT 453
Query: 234 ADEALGSGLVSRVF 247
A EA GLVS+VF
Sbjct: 454 AREACAKGLVSQVF 467
>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
Length = 541
Score = 80.5 bits (197), Expect = 2e-15
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
Query: 54 SYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKM 113
+Y + V V R ++NA+N +EMV N + D D + V+ S AG +
Sbjct: 283 TYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAAD-DSKLVLFSAAGSV 341
Query: 114 FTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIG 173
F G+D ++ +D S + D I + TF + KP++ +V+G IG
Sbjct: 342 FCCGLDF----GYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFK---KPIVVSVNGPAIG 394
Query: 174 GGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMM 233
G ++ CD+ + + A+FQ G + D + PK++G S NE+ RK+
Sbjct: 395 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKAS-ANEMLIAGRKLT 453
Query: 234 ADEALGSGLVSRVF 247
A EA GLVS+VF
Sbjct: 454 AREACAKGLVSQVF 467
>gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]
Length = 506
Score = 79.0 bits (193), Expect = 6e-15
Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 20/238 (8%)
Query: 60 VTSAQKHVLHVQLN-RPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGI 118
V ++ H+ L+ + + NA+ +E+ + D D + +++S G +F +G+
Sbjct: 253 VVRKEEGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATD-DSKLLLLSAVGSVFCSGL 311
Query: 119 DLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDL 178
D + + + + RI+ +RD + + + KP++ A++G +G G +
Sbjct: 312 DYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQF-------KKPIVVAINGPALGLGASI 364
Query: 179 VTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEAL 238
+ CDI + ++ A+FQ + L + P+++G +L NE+ F RK+ A EA
Sbjct: 365 LPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILG-VALANEMLFCGRKLTAQEAC 423
Query: 239 GSGLVSRVF----PDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLN 292
GLVS+VF +EVML E++S S V ++ +K L+ S SV E +N
Sbjct: 424 SRGLVSQVFWPTTFSQEVML-----RVKEMASCSAVVLEESKC-LVRSFLKSVLEDVN 475
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 77.4 bits (189), Expect = 2e-14
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 70 VQLNRPNKR-NAMNKVFWREMVECFNKISRDADCR-AVVISGAGKMFTAGIDL-MDMASD 126
V++N PN + N ++K E E N+I R AV+IS F AG D+ M A
Sbjct: 52 VRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACK 111
Query: 127 ILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRY 186
LQ +V ++S + I+ + +E+ KP++AA++G C+GGG+++ +C R
Sbjct: 112 TLQ----EVTQLSQEAQRIVEK-------LEKSTKPIVAAINGSCLGGGLEVAISCQYRI 160
Query: 187 CAQD--AFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVS 244
+D EV +G G QRLPK++G + + ++ T R + AD A GLV
Sbjct: 161 ATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAAL-DMMLTGRSIRADRAKKMGLVD 219
Query: 245 RV 246
++
Sbjct: 220 QL 221
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 77.4 bits (189), Expect = 2e-14
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 17/279 (6%)
Query: 15 LTRRLTGSNYPGLSISLRLTGSSAQEEASGVALG-EAPDHSYESLRVTSAQKHVLHVQLN 73
L + NY L SL S + E +S V G + +E+L VTS + + + N
Sbjct: 72 LPKEAARQNYVDLVSSL----SPSLESSSQVEPGTDRKSTGFETLVVTS-EDGITKIMFN 126
Query: 74 RPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGD 133
RP K+NA+N + E++ S+D D V++G G +++G DL + + P G
Sbjct: 127 RPKKKNAINTEMYHEIMRALKAASKD-DSIITVLTGNGDYYSSGNDLTNFTD--IPPGG- 182
Query: 134 DVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFF 193
+ ++ +E PKP+IA V+G +G V L+ D Y + A F
Sbjct: 183 ----VEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATF 238
Query: 194 QVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVM 253
+G + + + PK++ + + E+ +K+ A EA GLV+ VFPD
Sbjct: 239 HTPFSHLGQSPEGCSSYTFPKIM-SPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQ 297
Query: 254 LDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLN 292
+ L A + P A++ +K ++ R+ ++N
Sbjct: 298 KEVWTRLKA-FAKLPPNALRISK-EVIRKREREKLHAVN 334
>gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo
sapiens]
Length = 303
Score = 74.7 bits (182), Expect = 1e-13
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 59 RVTSAQK--HVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTA 116
R TSA++ + ++ L+ P KRN ++ + + + D + ++IS G +F++
Sbjct: 46 RPTSARQLDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSS 105
Query: 117 GIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGV 176
G DL ++ + +G D Y ++ + I P PVIA V+G G
Sbjct: 106 GHDLKELTEE----QGRD------YHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGC 155
Query: 177 DLVTACDIRYCAQDAFFQVKEVDVGL---AADVGTLQRLPKVIGNQSLVNELAFTARKMM 233
LV +CDI + + F V+VGL V + +P+ + E+ FT +
Sbjct: 156 QLVASCDIAVASDKSSFATPGVNVGLFCSTPGVALARAVPR-----KVALEMLFTGEPIS 210
Query: 234 ADEALGSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTK 276
A EAL GL+S+V P+ E+ + + +A +I+S S V K
Sbjct: 211 AQEALLHGLLSKVVPEAELQ-EETMRIARKIASLSRPVVSLGK 252
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 72.4 bits (176), Expect = 5e-13
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 79 NAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARI 138
NA++ R++ E K D +A+VI GA F+AG D+ ++
Sbjct: 22 NAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFSAP------------ 69
Query: 139 SWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEV 198
R + I+R KPV+AA+ G GGG++L C R +A + EV
Sbjct: 70 ----RTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEV 125
Query: 199 DVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAAL 258
+GL Q LP++ G + + +L + R+++ADEAL G++ +V V + A+
Sbjct: 126 TLGLLPGARGTQLLPRLTGVPAAL-DLITSGRRILADEALKLGILDKVVNSDPV--EEAI 182
Query: 259 ALAAEISSK--SPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDLVKSVQATTE 316
A +S + + + + L + D +E+L + + L + V++VQA +
Sbjct: 183 RFAQRVSDQPLESRRLCNKPIQSLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQ 242
>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
1 [Homo sapiens]
Length = 301
Score = 72.0 bits (175), Expect = 7e-13
Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 13/222 (5%)
Query: 72 LNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPK 131
LN P++ NA + V +++E ++ + + +++ GA F++G DL + S L
Sbjct: 63 LNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKS--LGTP 120
Query: 132 GDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDA 191
D +A + ++++ +TR+ R P +A V G +GGG + TACD R ++
Sbjct: 121 EDGMA-VCMFMQNTLTRFM-------RLPLISVALVQGWALGGGAEFTTACDFRLMTPES 172
Query: 192 FFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVF--PD 249
+ ++G+ G RL ++IG++ + L+ A K+ + AL G+V V D
Sbjct: 173 KIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLS-GALKLDSKNALNIGMVEEVLQSSD 231
Query: 250 KEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESL 291
+ L+ A + P +++ K ++ R+ + E+L
Sbjct: 232 ETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEAL 273
>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
5 [Homo sapiens]
Length = 307
Score = 72.0 bits (175), Expect = 7e-13
Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 13/222 (5%)
Query: 72 LNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPK 131
LN P++ NA + V +++E ++ + + +++ GA F++G DL + S L
Sbjct: 69 LNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKS--LGTP 126
Query: 132 GDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDA 191
D +A + ++++ +TR+ R P +A V G +GGG + TACD R ++
Sbjct: 127 EDGMA-VCMFMQNTLTRFM-------RLPLISVALVQGWALGGGAEFTTACDFRLMTPES 178
Query: 192 FFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVF--PD 249
+ ++G+ G RL ++IG++ + L+ A K+ + AL G+V V D
Sbjct: 179 KIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLS-GALKLDSKNALNIGMVEEVLQSSD 237
Query: 250 KEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESL 291
+ L+ A + P +++ K ++ R+ + E+L
Sbjct: 238 ETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEAL 279
>gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
[Homo sapiens]
Length = 338
Score = 67.4 bits (163), Expect = 2e-11
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 19/260 (7%)
Query: 70 VQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAG-KMFTAGIDLMDMASDIL 128
+ LNRP NA+ R++ K +D + ++I GAG K F AG D+ ++
Sbjct: 49 ITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVIS---- 104
Query: 129 QPKGDDVARISWYLRDIITRYQETFN-VIERCPKPVIAAVHGGCIGGGVDLVTACDIRYC 187
+ + + + R + N + C KP +A +HG +GGGV L R
Sbjct: 105 -----EAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVA 159
Query: 188 AQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSR-V 246
+ F + E +GL DVG LP++ G L LA T ++ + +G+ + V
Sbjct: 160 TEKCLFAMPETAIGLFPDVGGGYFLPRLQG--KLGYFLALTGFRLKGRDVYRAGIATHFV 217
Query: 247 FPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQD 306
+K ML+ L ++ KSP V Y + + +++ +M + +
Sbjct: 218 DSEKLAMLEEDL-----LALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCF 272
Query: 307 LVKSVQATTENKELKTVTFS 326
+V+ EN + +F+
Sbjct: 273 SANTVEEIIENLQQDGSSFA 292
>gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1
[Homo sapiens]
Length = 386
Score = 67.4 bits (163), Expect = 2e-11
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 19/260 (7%)
Query: 70 VQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAG-KMFTAGIDLMDMASDIL 128
+ LNRP NA+ R++ K +D + ++I GAG K F AG D+ ++
Sbjct: 49 ITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVIS---- 104
Query: 129 QPKGDDVARISWYLRDIITRYQETFN-VIERCPKPVIAAVHGGCIGGGVDLVTACDIRYC 187
+ + + + R + N + C KP +A +HG +GGGV L R
Sbjct: 105 -----EAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVA 159
Query: 188 AQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSR-V 246
+ F + E +GL DVG LP++ G L LA T ++ + +G+ + V
Sbjct: 160 TEKCLFAMPETAIGLFPDVGGGYFLPRLQG--KLGYFLALTGFRLKGRDVYRAGIATHFV 217
Query: 247 FPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQD 306
+K ML+ L ++ KSP V Y + + +++ +M + +
Sbjct: 218 DSEKLAMLEEDL-----LALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCF 272
Query: 307 LVKSVQATTENKELKTVTFS 326
+V+ EN + +F+
Sbjct: 273 SANTVEEIIENLQQDGSSFA 292
>gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Homo
sapiens]
Length = 261
Score = 66.2 bits (160), Expect = 4e-11
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 47/261 (18%)
Query: 67 VLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVI-SGAGKMFTAGIDLMDMAS 125
+ + +NRP+ RNA+ VF E++E ++ D R ++ SG +F AG DL +
Sbjct: 42 ITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQ 101
Query: 126 DILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIR 185
G V R+ + DI
Sbjct: 102 MSEAEVGVFVQRLRGLMNDI---------------------------------------- 121
Query: 186 YCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSR 245
A A + E GL G QRLP+ +G +L EL FT R++ EA GLV+
Sbjct: 122 --ASSAVMGLIETTRGLLPGAGGTQRLPRCLG-VALAKELIFTGRRLSGTEAHVLGLVNH 178
Query: 246 VFPDKE---VMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSML 302
E A ALA EI ++P+AV+ KV + + +A + +
Sbjct: 179 AVAQNEEGDAAYQRARALAQEILPQAPIAVRLGKVAIDRGTEVDIASGMAIEGMCYAQNI 238
Query: 303 QTQDLVKSVQATTENKELKTV 323
T+D ++ + A E + K V
Sbjct: 239 PTRDRLEGMAAFREKRTPKFV 259
>gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isoform
3 [Homo sapiens]
Length = 226
Score = 60.8 bits (146), Expect = 2e-09
Identities = 48/206 (23%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 88 EMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDIIT 147
+++E ++ + + +++ GA F++G DL + S L D +A + ++++ +T
Sbjct: 4 QLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKS--LGTPEDGMA-VCMFMQNTLT 60
Query: 148 RYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVG 207
R+ R P +A V G +GGG + TACD R ++ + ++G+ G
Sbjct: 61 RFM-------RLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWG 113
Query: 208 TLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVF--PDKEVMLDAALALAAEIS 265
RL ++IG++ + L+ A K+ + AL G+V V D+ L+ A +
Sbjct: 114 GTTRLVEIIGSRQALKVLS-GALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFI 172
Query: 266 SKSPVAVQSTKVNLLYSRDHSVAESL 291
P +++ K ++ R+ + E+L
Sbjct: 173 QGPPEVIRALKKSVCSGRELYLEEAL 198
>gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Homo
sapiens]
Length = 302
Score = 55.5 bits (132), Expect = 7e-08
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 79 NAMNKVFWREMVECFNKISRDADCRAVVI-SGAGKMFTAGIDLMDMASDILQPKGDDVAR 137
N+++ F E+V K+ D R V++ S +F+AG+DL +M G A
Sbjct: 68 NSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMC-------GRSPAH 120
Query: 138 ISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQV-- 195
+ Y + + QE + + + +++A++G C GG + CD R A + + +
Sbjct: 121 YAGYWKAV----QELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGL 176
Query: 196 KEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLD 255
E +G+ A L IG+++ L A EAL G+V +V P+++V
Sbjct: 177 NETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPA-EALQVGIVDQVVPEEQVQST 235
Query: 256 AALALA 261
A A+A
Sbjct: 236 ALSAIA 241
>gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Homo
sapiens]
Length = 227
Score = 54.3 bits (129), Expect = 1e-07
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 86 WREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDI 145
+ E++ S+D D V++G G +++G DL + + P G + ++
Sbjct: 2 YHEIMRALKAASKD-DSIITVLTGNGDYYSSGNDLTNFTD--IPPGG-----VEEKAKNN 53
Query: 146 ITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAAD 205
+E PKP+IA V+G +G V L+ D Y + A F +G + +
Sbjct: 54 AVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPE 113
Query: 206 VGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEIS 265
+ PK++ + + E+ +K+ A EA GLV+ VFPD + L A +
Sbjct: 114 GCSSYTFPKIM-SPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKA-FA 171
Query: 266 SKSPVAVQSTKVNLLYSRDHSVAESLN 292
P A++ +K ++ R+ ++N
Sbjct: 172 KLPPNALRISK-EVIRKREREKLHAVN 197
>gi|189571693 potassium channel tetramerisation domain containing 6
[Homo sapiens]
Length = 237
Score = 29.3 bits (64), Expect = 5.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 268 SPVAVQSTKVNLLYSRDHSVAESL-NYVASWNMSMLQTQD 306
+PVAV T++ + ++ HS+ E + NY WN M+ T+D
Sbjct: 134 NPVAVIITQLTIT-TKVHSLLEGISNYFTKWNKHMMDTRD 172
>gi|189571691 potassium channel tetramerisation domain containing 6
[Homo sapiens]
Length = 237
Score = 29.3 bits (64), Expect = 5.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 268 SPVAVQSTKVNLLYSRDHSVAESL-NYVASWNMSMLQTQD 306
+PVAV T++ + ++ HS+ E + NY WN M+ T+D
Sbjct: 134 NPVAVIITQLTIT-TKVHSLLEGISNYFTKWNKHMMDTRD 172
>gi|18860857 menin isoform 1 [Homo sapiens]
Length = 615
Score = 28.9 bits (63), Expect = 6.6
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 20/117 (17%)
Query: 122 DMASDILQPKGDDVARISWYLRDIITRYQETFNV-------------IERCPKPVIAAVH 168
D A + P G+ A ++W+ + R +T N RC + + A
Sbjct: 185 DHAWVVFGPNGEQTAEVTWHGKGNEDRRGQTVNAGVAERSWLYLKGSYMRCDRKMEVAFM 244
Query: 169 GGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNEL 225
I +DL T Q+++ + L D+G L+R P +GN + + EL
Sbjct: 245 VCAINPSIDLHTD-------SLELLQLQQKLLWLLYDLGHLERYPMALGNLADLEEL 294
>gi|18860855 menin isoform 1 [Homo sapiens]
Length = 615
Score = 28.9 bits (63), Expect = 6.6
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 20/117 (17%)
Query: 122 DMASDILQPKGDDVARISWYLRDIITRYQETFNV-------------IERCPKPVIAAVH 168
D A + P G+ A ++W+ + R +T N RC + + A
Sbjct: 185 DHAWVVFGPNGEQTAEVTWHGKGNEDRRGQTVNAGVAERSWLYLKGSYMRCDRKMEVAFM 244
Query: 169 GGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNEL 225
I +DL T Q+++ + L D+G L+R P +GN + + EL
Sbjct: 245 VCAINPSIDLHTD-------SLELLQLQQKLLWLLYDLGHLERYPMALGNLADLEEL 294
>gi|18860851 menin isoform 1 [Homo sapiens]
Length = 615
Score = 28.9 bits (63), Expect = 6.6
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 20/117 (17%)
Query: 122 DMASDILQPKGDDVARISWYLRDIITRYQETFNV-------------IERCPKPVIAAVH 168
D A + P G+ A ++W+ + R +T N RC + + A
Sbjct: 185 DHAWVVFGPNGEQTAEVTWHGKGNEDRRGQTVNAGVAERSWLYLKGSYMRCDRKMEVAFM 244
Query: 169 GGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNEL 225
I +DL T Q+++ + L D+G L+R P +GN + + EL
Sbjct: 245 VCAINPSIDLHTD-------SLELLQLQQKLLWLLYDLGHLERYPMALGNLADLEEL 294
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.131 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,334,798
Number of Sequences: 37866
Number of extensions: 400903
Number of successful extensions: 1040
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 980
Number of HSP's gapped (non-prelim): 41
length of query: 328
length of database: 18,247,518
effective HSP length: 103
effective length of query: 225
effective length of database: 14,347,320
effective search space: 3228147000
effective search space used: 3228147000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.